No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0131821 RchiOBHm_Chr2g0162631 RchiOBHm_Chr4g0410331 RchiOBHm_Chr4g0420191 RchiOBHm_Chr5g0010521 |
| rosa_laevigata | RLG00000016801 RLG00000023312 |
| rosa_roxburghii | Rroxscaffold_2G00085420 |
| rosa_samantha | Rh1AG135000 Rh1AG162200 Rh1AG256800 Rh1AG295900 Rh1CG151700 Rh1DG235900 Rh2BG384100 Rh2CG632200 Rh3BG375400 Rh3CG255600 Rh5AG535000 Rh5DG090700 Rh5DG473500 Rh6AG293000 Rh7BG431900 |
| rosa_wichuraiana | Rw2G003760 Rw5G026980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 45 |
| AclI | AACGTT | 1 cut(s) | 168 |
| AcoI | YGGCCR | 1 cut(s) | 77 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 45 |
| AflII | CTTAAG | 1 cut(s) | 134 |
| AgsI | TTSAA | 2 cut(s) | 118, 157 |
| AluBI | AGCT | 1 cut(s) | 59 |
| AluI | AGCT | 1 cut(s) | 59 |
| Alw26I | GTCTC | 1 cut(s) | 106 |
| AoxI | GGCC | 1 cut(s) | 77 |
| AsuHPI | GGTGA | 1 cut(s) | 53 |
| BalI | TGGCCA | 1 cut(s) | 79 |
| BccI | CCATC | 1 cut(s) | 69 |
| BcoDI | GTCTC | 1 cut(s) | 106 |
| BfrI | CTTAAG | 1 cut(s) | 134 |
| Bsa29I | ATCGAT | 1 cut(s) | 73 |
| BsaBI | GATNNNNATC | 1 cut(s) | 94 |
| BsaJI | CCNNGG | 1 cut(s) | 80 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 45 |
| Bse1I | ACTGG | 1 cut(s) | 50 |
| Bse8I | GATNNNNATC | 1 cut(s) | 94 |
| BseCI | ATCGAT | 1 cut(s) | 73 |
| BseDI | CCNNGG | 1 cut(s) | 80 |
| BseJI | GATNNNNATC | 1 cut(s) | 94 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 45 |
| BseNI | ACTGG | 1 cut(s) | 50 |
| BshFI | GGCC | 1 cut(s) | 79 |
| BshVI | ATCGAT | 1 cut(s) | 73 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 45 |
| BsmAI | GTCTC | 1 cut(s) | 106 |
| BsnI | GGCC | 1 cut(s) | 79 |
| Bsp143I | GATC | 2 cut(s) | 33, 70 |
| BspANI | GGCC | 1 cut(s) | 79 |
| BspDI | ATCGAT | 1 cut(s) | 73 |
| BspTI | CTTAAG | 1 cut(s) | 134 |
| BsrI | ACTGG | 1 cut(s) | 50 |
| BssECI | CCNNGG | 1 cut(s) | 80 |
| BssMI | GATC | 2 cut(s) | 33, 70 |
| BssT1I | CCWWGG | 1 cut(s) | 80 |
| Bst4CI | ACNGT | 1 cut(s) | 65 |
| Bst6I | CTCTTC | 1 cut(s) | 80 |
| BstAFI | CTTAAG | 1 cut(s) | 134 |
| BstKTI | GATC | 2 cut(s) | 36, 73 |
| BstMAI | GTCTC | 1 cut(s) | 106 |
| BstMBI | GATC | 2 cut(s) | 33, 70 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 75 |
| Bsu15I | ATCGAT | 1 cut(s) | 73 |
| BsuRI | GGCC | 1 cut(s) | 79 |
| BsuTUI | ATCGAT | 1 cut(s) | 73 |
| ClaI | ATCGAT | 1 cut(s) | 73 |
| CviJI | RGCY | 4 cut(s) | 59, 79, 161, 193 |
| CviKI_1 | RGCY | 4 cut(s) | 59, 79, 161, 193 |
| DpnI | GATC | 2 cut(s) | 35, 72 |
| DpnII | GATC | 2 cut(s) | 33, 70 |
| EaeI | YGGCCR | 1 cut(s) | 77 |
| Eam1104I | CTCTTC | 1 cut(s) | 80 |
| EarI | CTCTTC | 1 cut(s) | 80 |
| Eco130I | CCWWGG | 1 cut(s) | 80 |
| EcoT14I | CCWWGG | 1 cut(s) | 80 |
| ErhI | CCWWGG | 1 cut(s) | 80 |
| HaeIII | GGCC | 1 cut(s) | 79 |
| HincII | GTYRAC | 1 cut(s) | 166 |
| HindII | GTYRAC | 1 cut(s) | 166 |
| HphI | GGTGA | 1 cut(s) | 53 |
| Hpy166II | GTNNAC | 1 cut(s) | 166 |
| Hpy188I | TCNGA | 1 cut(s) | 174 |
| Hpy188III | TCNNGA | 2 cut(s) | 31, 68 |
| Hpy8I | GTNNAC | 1 cut(s) | 166 |
| Hpy99I | CGWCG | 1 cut(s) | 32 |
| HpyAV | CCTTC | 3 cut(s) | 43, 112, 151 |
| HpyCH4III | ACNGT | 1 cut(s) | 65 |
| HpyCH4IV | ACGT | 1 cut(s) | 168 |
| HpySE526I | ACGT | 1 cut(s) | 168 |
| Kzo9I | GATC | 2 cut(s) | 33, 70 |
| LpnPI | CCDG | 3 cut(s) | 31, 81, 134 |
| MaeII | ACGT | 1 cut(s) | 168 |
| MalI | GATC | 2 cut(s) | 35, 72 |
| MboI | GATC | 2 cut(s) | 33, 70 |
| MboII | GAAGA | 2 cut(s) | 14, 97 |
| MlsI | TGGCCA | 1 cut(s) | 79 |
| MluNI | TGGCCA | 1 cut(s) | 79 |
| MnlI | CCTC | 2 cut(s) | 24, 180 |
| Mox20I | TGGCCA | 1 cut(s) | 79 |
| MscI | TGGCCA | 1 cut(s) | 79 |
| MseI | TTAA | 1 cut(s) | 135 |
| Msp20I | TGGCCA | 1 cut(s) | 79 |
| MspCI | CTTAAG | 1 cut(s) | 134 |
| NdeII | GATC | 2 cut(s) | 33, 70 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 45 |
| Psp1406I | AACGTT | 1 cut(s) | 168 |
| SaqAI | TTAA | 1 cut(s) | 135 |
| Sau3AI | GATC | 2 cut(s) | 33, 70 |
| SetI | ASST | 3 cut(s) | 61, 153, 171 |
| SmlI | CTYRAG | 1 cut(s) | 134 |
| SmoI | CTYRAG | 1 cut(s) | 134 |
| StyI | CCWWGG | 1 cut(s) | 80 |
| TaaI | ACNGT | 1 cut(s) | 65 |
| TaiI | ACGT | 1 cut(s) | 171 |
| TaqI | TCGA | 3 cut(s) | 30, 73, 144 |
| Tru1I | TTAA | 1 cut(s) | 135 |
| Tru9I | TTAA | 1 cut(s) | 135 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 45 |
| Vha464I | CTTAAG | 1 cut(s) | 134 |