RchiOBHm_Chr1g0326741

Bifunctional purine biosynthesis protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
15276753 .. 15283618
6866 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1548 bp
ATGCCGTGGCTGCCCAAGAGGCTCAATCCTCAGCCTCAGGCTCTGATATCTTTGTCAGACAAAAACAATCTTGCTTTCTTAGGGAATGAACTTCAGAACTTGGGATATAAAATTGTTTCCACTGGAGGAACTGCATCTGCTTTAGAAAGTGCCGGAGTGTCTGTCACTAAAGTTGAAGAACTTACTTGCTTCCCGGAGATGCTCGATGGTCGTGTAAAAACTTTACACCCCAACATTCATGGGGGGGGTATCCTTGCTAGAAGAGACCAAAAGCATCATATGGAAGCTCTTAGTAATCACGGAATTGGTACATTCGATGTGGTTGTGGTGAATTTATATCCCTTTTATGATAAAAATATAGATATTGGTGGTCCTGCCGTGATTACAGCTGCTGCAAAGAATCACAAAGATGTCCTGGTGGTTGTTGATTCAGAAGACTATCATGCACTGCTAGAATATCTTAAAGCGGACATTGATGATCAACAATTCCGAAGAAACCTTGCGTGGAAGGCTTTTCAACATGTTGCTTCTTATGATTCTGCTGTTTCAGAGTGGCTTTGGAGGCAGACTACTGAAGATAAATTCCCTCCTACCTTAACAGTTCCTCTATTGCTCAAAAGTCCCCTTCGGTATGGTGAAAATCCTCATCAAAAGGCTGCATTCTGTGTTGACAAGAGTCTTTCTGAGGTTAATGCTGGTGGCATTGCAACTGCTATTCAACATCATGGGAAGGAGATGTCATATAATAACTATTTAGATGCCGATGCGGCTTGGAATTGTGTGTCAGAGTTCAGAAGTCCTACTTGTGTTGTTGTAAAACATACAAATCCTTGTGGTGTAGCATCACGTGATGATATACTTGACGCATACAGGCTTGCTGTCAAAGCAGATCCAGTGAGTGCATTTGGTGGCATTGTAGCTTTCAACATAGAGGTTGATGAGGCTCTTTCTAAAGAAATCCGTGAGTTTAGAAGCCCAACAGATGGTGAAACTCGGATGTTTTATGAGATTGTGGTTGCACCCAAGTATTCAAAGAAAGGACTCGAAATCCTTCGTGGAAAATCAAAGACTCTGAGGATCCTCAAGGCAAGCAAAAATGAGAAAGGAAAACTTTCGCTTAGACAGGTTGGTGGTGGGTGGTTAGCCCAGGAGTCAGATGATTTAATTCCCCAAGATATCCAGTTTAATGTTGTGTCTAAGAAATCTCCAGAAGAAAGTGAGCTCAGTGATGCAGAGTTCGCATGGTTGTGTGTCAAACATGTCAAAAGCAATGCAATTGTAATAGCAAAGAATAACTGTATGTTGGGTATGGGAAGTGGACAGCCGAACCGTTTGGAGAGTTTAAGAATAGCATTGAGGAAAGCAGGAGAGGAGGTCAAGGGTGCAGCTTTGGCTAGCGATGCCTTCTTCCCATTCGCTTGGAAAGATGCCGTGGAAGAAGCATGCGAAAGTGGAGTTAGTGTTATTGCAGAACCTGGTGGCAGTATAAGAGACGGAGGATGCTATAGATTGCTGCAACAAATATGGTGTTTCACTTGTTCTCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

515

Amino Acids

56.69

Weight (kDa)

6.19

Isoelectric Point (pI)

45.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MGS PF02142 27 - 120 3.1e-17 MGS-like domain
AICARFT_IMPCHas PF01808 131 - 454 5e-112 AICARFT/IMPCHase bienzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 983
AciI CCGC 2 cut(s) 467, 767
AclWI GGATC 3 cut(s) 884, 1072, 1085
AcsI RAATTY 2 cut(s) 331, 581
AcuI CTGAAG 2 cut(s) 77, 594
AcvI CACGTG 1 cut(s) 848
AfaI GTAC 1 cut(s) 310
AfiI CCNNNNNNNGG 1 cut(s) 983
AflIII ACRYGT 2 cut(s) 520, 1258
AgsI TTSAA 5 cut(s) 176, 518, 719, 925, 1032
AjnI CCWGG 3 cut(s) 414, 1146, 1474
AluBI AGCT 5 cut(s) 287, 389, 920, 1222, 1388
AluI AGCT 5 cut(s) 287, 389, 920, 1222, 1388
Alw21I GWGCWC 1 cut(s) 1224
Alw26I GTCTC 2 cut(s) 258, 1485
AlwI GGATC 3 cut(s) 884, 1072, 1085
AlwNI CAGNNNCTG 3 cut(s) 43, 392, 1475
ApeKI GCWGC 6 cut(s) 10, 389, 392, 656, 1385, 1513
ApoI RAATTY 2 cut(s) 331, 581
Asp700I GAANNNNTTC 2 cut(s) 1050, 1111
AspS9I GGNCC 1 cut(s) 371
AsuC2I CCSGG 1 cut(s) 194
AsuHPI GGTGA 3 cut(s) 340, 647, 998
AsuNHI GCTAGC 1 cut(s) 1394
AvaII GGWCC 1 cut(s) 371
AxyI CCTNAGG 1 cut(s) 36
BamHI GGATCC 1 cut(s) 1077
BanII GRGCYC 1 cut(s) 1224
BbrPI CACGTG 1 cut(s) 848
BbsI GAAGAC 1 cut(s) 441
Bbv12I GWGCWC 1 cut(s) 1224
BbvCI CCTCAGC 1 cut(s) 30
BbvI GCAGC 5 cut(s) 376, 379, 643, 1397, 1500
BccI CCATC 2 cut(s) 200, 977
BceAI ACGGC 2 cut(s) 362, 1415
BciT130I CCWGG 3 cut(s) 416, 1148, 1476
BciVI GTATCC 1 cut(s) 260
BclI TGATCA 1 cut(s) 478
BcnI CCSGG 1 cut(s) 194
BcoDI GTCTC 2 cut(s) 258, 1485
BfaI CTAG 3 cut(s) 258, 452, 1395
BfmI CTRYAG 1 cut(s) 1504
BfuI GTATCC 1 cut(s) 260
BglI GCCNNNNNGGC 2 cut(s) 19, 767
BisI GCNGC 7 cut(s) 11, 390, 393, 657, 768, 1386, 1514
BlsI GCNGC 7 cut(s) 12, 391, 394, 658, 769, 1387, 1515
Bme1390I CCNGG 4 cut(s) 194, 416, 1148, 1476
Bme18I GGWCC 1 cut(s) 371
BmgT120I GGNCC 1 cut(s) 371
BmiI GGNNCC 1 cut(s) 1079
BmrFI CCNGG 4 cut(s) 194, 416, 1148, 1476
BmtI GCTAGC 1 cut(s) 1398
BoxI GACNNNNGTC 1 cut(s) 675
BpiI GAAGAC 1 cut(s) 441
BpmI CTGGAG 2 cut(s) 144, 1191
Bpu10I CCTNAGC 1 cut(s) 30
BpuEI CTTGAG 1 cut(s) 1067
BpuMI CCSGG 1 cut(s) 194
BsaAI YACGTR 1 cut(s) 848
BsaI GGTCTC 1 cut(s) 258
BsaJI CCNNGG 3 cut(s) 5, 1146, 1431
BsaXI ACNNNNNCTCC 6 cut(s) 147, 177, 1359, 1389, 1446, 1476
Bsc4I CCNNNNNNNGG 1 cut(s) 983
Bse1I ACTGG 3 cut(s) 127, 893, 1180
Bse21I CCTNAGG 1 cut(s) 36
Bse3DI GCAATG 2 cut(s) 702, 1276
BseBI CCWGG 3 cut(s) 416, 1148, 1476
BseDI CCNNGG 3 cut(s) 5, 1146, 1431
BseGI GGATG 2 cut(s) 1002, 1505
BseLI CCNNNNNNNGG 1 cut(s) 983
BseMI GCAATG 2 cut(s) 702, 1276
BseMII CTCAG 5 cut(s) 44, 50, 675, 1064, 1237
BseNI ACTGG 3 cut(s) 127, 893, 1180
BseRI GAGGAG 1 cut(s) 1385
BseXI GCAGC 5 cut(s) 376, 379, 643, 1397, 1500
BsgI GTGCAG 1 cut(s) 1404
BsiHKAI GWGCWC 1 cut(s) 1224
BsiSI CCGG 2 cut(s) 153, 194
BslFI GGGAC 1 cut(s) 606
BslI CCNNNNNNNGG 1 cut(s) 983
BsmAI GTCTC 2 cut(s) 258, 1485
BsmBI CGTCTC 1 cut(s) 1485
BsmFI GGGAC 1 cut(s) 606
BsmI GAATGC 1 cut(s) 659
Bso31I GGTCTC 1 cut(s) 258
Bsp1286I GDGCHC 1 cut(s) 1224
Bsp143I GATC 3 cut(s) 478, 889, 1077
BspACI CCGC 2 cut(s) 467, 767
BspCNI CTCAG 5 cut(s) 43, 49, 676, 1065, 1236
BspLI GGNNCC 1 cut(s) 1079
BspOI GCTAGC 1 cut(s) 1398
BspPI GGATC 3 cut(s) 884, 1072, 1085
BspTNI GGTCTC 1 cut(s) 258
BsrDI GCAATG 2 cut(s) 702, 1276
BsrI ACTGG 3 cut(s) 127, 893, 1180
BssECI CCNNGG 3 cut(s) 5, 1146, 1431
BssMI GATC 3 cut(s) 478, 889, 1077
Bst2UI CCWGG 3 cut(s) 416, 1148, 1476
Bst4CI ACNGT 3 cut(s) 601, 1298, 1331
Bst6I CTCTTC 1 cut(s) 256
BstBAI YACGTR 1 cut(s) 848
BstC8I GCNNGC 4 cut(s) 876, 1090, 1396, 1444
BstDEI CTNAG 9 cut(s) 30, 36, 79, 290, 684, 1073, 1118, 1197, 1223
BstDSI CCRYGG 2 cut(s) 5, 1431
BstF5I GGATG 2 cut(s) 1002, 1505
BstKTI GATC 3 cut(s) 481, 892, 1080
BstMAI GTCTC 2 cut(s) 258, 1485
BstMBI GATC 3 cut(s) 478, 889, 1077
BstMWI GCNNNNNNNGC 9 cut(s) 10, 19, 509, 562, 767, 884, 1238, 1391, 1400
BstNI CCWGG 3 cut(s) 416, 1148, 1476
BstNSI RCATGY 3 cut(s) 524, 1262, 1446
BstPAI GACNNNNGTC 1 cut(s) 675
BstSCI CCNGG 4 cut(s) 192, 414, 1146, 1474
BstSFI CTRYAG 1 cut(s) 1504
BstV1I GCAGC 5 cut(s) 376, 379, 643, 1397, 1500
BstV2I GAAGAC 1 cut(s) 441
BstX2I RGATCY 2 cut(s) 889, 1077
BstXI CCANNNNNNTGG 1 cut(s) 1419
BstYI RGATCY 2 cut(s) 889, 1077
Bsu36I CCTNAGG 1 cut(s) 36
BsuI GTATCC 1 cut(s) 260
BtgI CCRYGG 2 cut(s) 5, 1431
BtgZI GCGATG 1 cut(s) 1413
BtsCI GGATG 2 cut(s) 1002, 1505
BtsI GCAGTG 1 cut(s) 446
BtsIMutI CAGTG 4 cut(s) 120, 446, 900, 1231
Cac8I GCNNGC 4 cut(s) 876, 1090, 1396, 1444
CaiI CAGNNNCTG 3 cut(s) 43, 392, 1475
Cfr13I GGNCC 1 cut(s) 371
CseI GACGC 1 cut(s) 872
CsiI ACCWGGT 1 cut(s) 1474
Csp6I GTAC 1 cut(s) 309
CviAII CATG 7 cut(s) 239, 443, 521, 725, 1242, 1259, 1443
CviQI GTAC 1 cut(s) 309
DdeI CTNAG 9 cut(s) 30, 36, 79, 290, 684, 1073, 1118, 1197, 1223
DpnI GATC 3 cut(s) 480, 891, 1079
DpnII GATC 3 cut(s) 478, 889, 1077
Eam1104I CTCTTC 1 cut(s) 256
EarI CTCTTC 1 cut(s) 256
Ecl136II GAGCTC 1 cut(s) 1222
Eco24I GRGCYC 1 cut(s) 1224
Eco31I GGTCTC 1 cut(s) 258
Eco32I GATATC 2 cut(s) 48, 1177
Eco47I GGWCC 1 cut(s) 371
Eco53kI GAGCTC 1 cut(s) 1222
Eco57I CTGAAG 2 cut(s) 77, 594
Eco72I CACGTG 1 cut(s) 848
Eco81I CCTNAGG 1 cut(s) 36
EcoICRI GAGCTC 1 cut(s) 1222
EcoRII CCWGG 3 cut(s) 414, 1146, 1474
EcoRV GATATC 2 cut(s) 48, 1177
EcoT38I GRGCYC 1 cut(s) 1224
Esp3I CGTCTC 1 cut(s) 1485
FaeI CATG 7 cut(s) 242, 446, 524, 728, 1245, 1262, 1446
FalI AAGNNNNNCTT 4 cut(s) 787, 819, 1095, 1127
FaqI GGGAC 1 cut(s) 606
FatI CATG 7 cut(s) 238, 442, 520, 724, 1241, 1258, 1442
FauNDI CATATG 1 cut(s) 279
FbaI TGATCA 1 cut(s) 478
Fnu4HI GCNGC 7 cut(s) 11, 390, 393, 657, 768, 1386, 1514
FokI GGATG 2 cut(s) 1009, 1512
FriOI GRGCYC 1 cut(s) 1224
Fsp4HI GCNGC 7 cut(s) 11, 390, 393, 657, 768, 1386, 1514
FspBI CTAG 3 cut(s) 258, 452, 1395
GluI GCNGC 7 cut(s) 11, 390, 393, 657, 768, 1386, 1514
GsuI CTGGAG 2 cut(s) 144, 1191
HapII CCGG 2 cut(s) 153, 194
HgaI GACGC 1 cut(s) 872
Hin1II CATG 7 cut(s) 242, 446, 524, 728, 1245, 1262, 1446
HincII GTYRAC 1 cut(s) 670
HindII GTYRAC 1 cut(s) 670
HinfI GANTC 7 cut(s) 400, 428, 536, 676, 1041, 1069, 1151
HpaII CCGG 2 cut(s) 153, 194
HphI GGTGA 3 cut(s) 340, 647, 998
Hpy166II GTNNAC 2 cut(s) 670, 1319
Hpy188III TCNNGA 1 cut(s) 1208
Hpy8I GTNNAC 2 cut(s) 670, 1319
HpyAV CCTTC 5 cut(s) 502, 635, 724, 1061, 1414
HpyCH4III ACNGT 3 cut(s) 601, 1298, 1331
HpyCH4IV ACGT 1 cut(s) 847
HpyF10VI GCNNNNNNNGC 9 cut(s) 10, 19, 509, 562, 767, 884, 1238, 1391, 1400
HpyF3I CTNAG 9 cut(s) 30, 36, 79, 290, 684, 1073, 1118, 1197, 1223
HpySE526I ACGT 1 cut(s) 847
Hsp92II CATG 7 cut(s) 242, 446, 524, 728, 1245, 1262, 1446
Ksp22I TGATCA 1 cut(s) 478
Kzo9I GATC 3 cut(s) 478, 889, 1077
Lsp1109I GCAGC 5 cut(s) 376, 379, 643, 1397, 1500
MabI ACCWGGT 1 cut(s) 1474
MaeI CTAG 3 cut(s) 258, 452, 1395
MaeII ACGT 1 cut(s) 847
MaeIII GTNAC 1 cut(s) 163
MalI GATC 3 cut(s) 480, 891, 1079
MboI GATC 3 cut(s) 478, 889, 1077
MboII GAAGA 8 cut(s) 188, 273, 446, 504, 587, 1223, 1399, 1448
MfeI CAATTG 1 cut(s) 1275
MflI RGATCY 2 cut(s) 889, 1077
MhlI GDGCHC 1 cut(s) 1224
MluCI AATT 8 cut(s) 111, 303, 331, 485, 581, 775, 1164, 1275
MlyI GAGTC 4 cut(s) 685, 1035, 1063, 1160
MroXI GAANNNNTTC 2 cut(s) 1050, 1111
MseI TTAA 6 cut(s) 462, 596, 690, 1163, 1185, 1343
MslI CAYNNNNRTG 2 cut(s) 408, 1246
MspA1I CMGCKG 1 cut(s) 389
MspI CCGG 2 cut(s) 153, 194
MspR9I CCNGG 4 cut(s) 194, 416, 1148, 1476
MunI CAATTG 1 cut(s) 1275
Mva1269I GAATGC 1 cut(s) 659
MvaI CCWGG 3 cut(s) 416, 1148, 1476
MwoI GCNNNNNNNGC 9 cut(s) 10, 19, 509, 562, 767, 884, 1238, 1391, 1400
NciI CCSGG 1 cut(s) 194
NdeI CATATG 1 cut(s) 279
NdeII GATC 3 cut(s) 478, 889, 1077
NheI GCTAGC 1 cut(s) 1394
NlaIII CATG 7 cut(s) 242, 446, 524, 728, 1245, 1262, 1446
NlaIV GGNNCC 1 cut(s) 1079
NmuCI GTSAC 1 cut(s) 163
NspI RCATGY 3 cut(s) 524, 1262, 1446
PaeI GCATGC 1 cut(s) 1446
PciI ACATGT 2 cut(s) 520, 1258
PctI GAATGC 1 cut(s) 659
PdmI GAANNNNTTC 2 cut(s) 1050, 1111
PfeI GAWTC 3 cut(s) 400, 428, 536
PflMI CCANNNNNTGG 1 cut(s) 983
PfoI TCCNGGA 1 cut(s) 192
PkrI GCNGC 7 cut(s) 12, 391, 394, 658, 769, 1387, 1515
PleI GAGTC 4 cut(s) 684, 1035, 1063, 1159
PmaCI CACGTG 1 cut(s) 848
PmlI CACGTG 1 cut(s) 848
PpsI GAGTC 4 cut(s) 684, 1035, 1063, 1159
Ppu21I YACGTR 1 cut(s) 848
PscI ACATGT 2 cut(s) 520, 1258
PshAI GACNNNNGTC 1 cut(s) 675
Psp124BI GAGCTC 1 cut(s) 1224
Psp6I CCWGG 3 cut(s) 414, 1146, 1474
PspCI CACGTG 1 cut(s) 848
PspGI CCWGG 3 cut(s) 414, 1146, 1474
PspN4I GGNNCC 1 cut(s) 1079
PspPI GGNCC 1 cut(s) 371
PstNI CAGNNNCTG 3 cut(s) 43, 392, 1475
PsuI RGATCY 2 cut(s) 889, 1077
PvuII CAGCTG 1 cut(s) 389
RsaI GTAC 1 cut(s) 310
RsaNI GTAC 1 cut(s) 309
RseI CAYNNNNRTG 2 cut(s) 408, 1246
SacI GAGCTC 1 cut(s) 1224
SaqAI TTAA 6 cut(s) 462, 596, 690, 1163, 1185, 1343
SatI GCNGC 7 cut(s) 11, 390, 393, 657, 768, 1386, 1514
Sau3AI GATC 3 cut(s) 478, 889, 1077
Sau96I GGNCC 1 cut(s) 371
SchI GAGTC 4 cut(s) 685, 1035, 1063, 1160
ScrFI CCNGG 4 cut(s) 194, 416, 1148, 1476
SduI GDGCHC 1 cut(s) 1224
SexAI ACCWGGT 1 cut(s) 1474
SfcI CTRYAG 1 cut(s) 1504
SinI GGWCC 1 cut(s) 371
SmiMI CAYNNNNRTG 2 cut(s) 408, 1246
SmlI CTYRAG 1 cut(s) 1082
SmoI CTYRAG 1 cut(s) 1082
SphI GCATGC 1 cut(s) 1446
Sse9I AATT 8 cut(s) 111, 303, 331, 485, 581, 775, 1164, 1275
SsiI CCGC 2 cut(s) 467, 767
SspMI CTAG 3 cut(s) 258, 452, 1395
SstI GAGCTC 1 cut(s) 1224
StyD4I CCNGG 4 cut(s) 192, 414, 1146, 1474
TaaI ACNGT 3 cut(s) 601, 1298, 1331
TaiI ACGT 1 cut(s) 850
TaqI TCGA 3 cut(s) 204, 315, 1044
TasI AATT 8 cut(s) 111, 303, 331, 485, 581, 775, 1164, 1275
TauI GCSGC 1 cut(s) 770
TfiI GAWTC 3 cut(s) 400, 428, 536
Tru1I TTAA 6 cut(s) 462, 596, 690, 1163, 1185, 1343
Tru9I TTAA 6 cut(s) 462, 596, 690, 1163, 1185, 1343
TscAI CASTG 4 cut(s) 127, 453, 900, 1231
TseFI GTSAC 1 cut(s) 163
TseI GCWGC 6 cut(s) 10, 389, 392, 656, 1385, 1513
Tsp45I GTSAC 1 cut(s) 163
TspDTI ATGAA 2 cut(s) 102, 227
TspGWI ACGGA 3 cut(s) 315, 950, 1509
TspRI CASTG 4 cut(s) 127, 453, 900, 1231
Van91I CCANNNNNTGG 1 cut(s) 983
VpaK11BI GGWCC 1 cut(s) 371
XapI RAATTY 2 cut(s) 331, 581
XceI RCATGY 3 cut(s) 524, 1262, 1446
XmnI GAANNNNTTC 2 cut(s) 1050, 1111
XspI CTAG 3 cut(s) 258, 452, 1395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.