positive regulation of cell-substrate adhesion
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_2 | PF13041 | 76 - 106 | 5.1e-08 | PPR repeat family |
| PPR | PF01535 | 78 - 106 | 1.3e-07 | PPR repeat |
| PPR_2 | PF13041 | 107 - 154 | 2.2e-07 | PPR repeat family |
| PPR_2 | PF13041 | 238 - 288 | 1.4e-06 | PPR repeat family |
| PPR_2 | PF13041 | 374 - 417 | 1.3e-08 | PPR repeat family |
| PPR_2 | PF13041 | 475 - 522 | 8.4e-09 | PPR repeat family |
| PPR | PF01535 | 478 - 508 | 3.2e-07 | PPR repeat |
| E_motif | PF20431 | 593 - 655 | 5e-16 | E motif |
| DYW_deaminase | PF14432 | 691 - 783 | 2.2e-44 | DYW family of nucleic acid deaminases |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 908 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 28 |
| AccI | GTMKAC | 1 cut(s) | 1584 |
| AccII | CGCG | 1 cut(s) | 714 |
| AclWI | GGATC | 1 cut(s) | 572 |
| AcsI | RAATTY | 3 cut(s) | 730, 1293, 2252 |
| AcuI | CTGAAG | 2 cut(s) | 1002, 1314 |
| AcvI | CACGTG | 1 cut(s) | 202 |
| AfaI | GTAC | 3 cut(s) | 1567, 1623, 2197 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 86 |
| AflII | CTTAAG | 1 cut(s) | 790 |
| AflIII | ACRYGT | 3 cut(s) | 201, 895, 1570 |
| AjiI | CACGTC | 1 cut(s) | 1708 |
| AjnI | CCWGG | 3 cut(s) | 1217, 1458, 1587 |
| AleI | CACNNNNGTG | 1 cut(s) | 132 |
| Alw21I | GWGCWC | 2 cut(s) | 1191, 1557 |
| Alw26I | GTCTC | 3 cut(s) | 67, 1084, 2286 |
| AlwI | GGATC | 1 cut(s) | 572 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1337, 1898 |
| AoxI | GGCC | 5 cut(s) | 1213, 1220, 1526, 1845, 1942 |
| ApeKI | GCWGC | 4 cut(s) | 284, 1241, 1805, 1898 |
| ApoI | RAATTY | 3 cut(s) | 730, 1293, 2252 |
| AseI | ATTAAT | 1 cut(s) | 942 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2283 |
| AspA2I | CCTAGG | 1 cut(s) | 130 |
| AspLEI | GCGC | 2 cut(s) | 461, 714 |
| AspS9I | GGNCC | 5 cut(s) | 21, 1214, 1527, 1845, 1942 |
| AsuHPI | GGTGA | 6 cut(s) | 41, 119, 587, 811, 823, 2300 |
| AsuII | TTCGAA | 1 cut(s) | 1367 |
| AvaII | GGWCC | 1 cut(s) | 21 |
| AvrII | CCTAGG | 1 cut(s) | 130 |
| BanII | GRGCYC | 2 cut(s) | 765, 1191 |
| BbrPI | CACGTG | 1 cut(s) | 202 |
| BbsI | GAAGAC | 1 cut(s) | 1320 |
| Bbv12I | GWGCWC | 2 cut(s) | 1191, 1557 |
| BbvI | GCAGC | 4 cut(s) | 296, 1253, 1817, 1885 |
| BccI | CCATC | 7 cut(s) | 104, 355, 404, 1049, 1994, 2015, 2032 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 444, 478, 650, 684 |
| BciT130I | CCWGG | 3 cut(s) | 1219, 1460, 1589 |
| BciVI | GTATCC | 2 cut(s) | 740, 1052 |
| BcoDI | GTCTC | 3 cut(s) | 67, 1084, 2286 |
| BfaI | CTAG | 2 cut(s) | 131, 630 |
| BfmI | CTRYAG | 1 cut(s) | 1899 |
| BfrI | CTTAAG | 1 cut(s) | 790 |
| BfuI | GTATCC | 2 cut(s) | 740, 1052 |
| BglII | AGATCT | 1 cut(s) | 1021 |
| BisI | GCNGC | 4 cut(s) | 285, 1242, 1806, 1899 |
| BlnI | CCTAGG | 1 cut(s) | 130 |
| BlsI | GCNGC | 4 cut(s) | 286, 1243, 1807, 1900 |
| Bme1390I | CCNGG | 3 cut(s) | 1219, 1460, 1589 |
| Bme18I | GGWCC | 1 cut(s) | 21 |
| BmgBI | CACGTC | 1 cut(s) | 1708 |
| BmgT120I | GGNCC | 5 cut(s) | 21, 1214, 1527, 1845, 1942 |
| BmiI | GGNNCC | 2 cut(s) | 1216, 1846 |
| BmrFI | CCNGG | 3 cut(s) | 1219, 1460, 1589 |
| BmrI | ACTGGG | 2 cut(s) | 186, 421 |
| BmuI | ACTGGG | 2 cut(s) | 186, 421 |
| BpiI | GAAGAC | 1 cut(s) | 1320 |
| BpmI | CTGGAG | 1 cut(s) | 2169 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1237 |
| Bpu14I | TTCGAA | 1 cut(s) | 1367 |
| BpuEI | CTTGAG | 2 cut(s) | 887, 1982 |
| BsaAI | YACGTR | 1 cut(s) | 202 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1026 |
| BsaJI | CCNNGG | 8 cut(s) | 17, 130, 581, 834, 1217, 1458, 1588, 1945 |
| BsaWI | WCCGGW | 1 cut(s) | 1416 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 358, 388, 405, 435 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 86 |
| Bse1I | ACTGG | 2 cut(s) | 181, 427 |
| Bse3DI | GCAATG | 3 cut(s) | 668, 1013, 1351 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1026 |
| BseBI | CCWGG | 3 cut(s) | 1219, 1460, 1589 |
| BseDI | CCNNGG | 8 cut(s) | 17, 130, 581, 834, 1217, 1458, 1588, 1945 |
| BseGI | GGATG | 8 cut(s) | 96, 393, 415, 615, 926, 1060, 1081, 2008 |
| BseJI | GATNNNNATC | 1 cut(s) | 1026 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 86 |
| BseMI | GCAATG | 3 cut(s) | 668, 1013, 1351 |
| BseMII | CTCAG | 4 cut(s) | 2079, 2192, 2233, 2279 |
| BseNI | ACTGG | 2 cut(s) | 181, 427 |
| BseRI | GAGGAG | 1 cut(s) | 1630 |
| BseXI | GCAGC | 4 cut(s) | 296, 1253, 1817, 1885 |
| BseYI | CCCAGC | 2 cut(s) | 1084, 1682 |
| BsgI | GTGCAG | 3 cut(s) | 573, 693, 1178 |
| Bsh1236I | CGCG | 1 cut(s) | 714 |
| BshFI | GGCC | 5 cut(s) | 1215, 1222, 1528, 1847, 1944 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1191, 1557 |
| BsiSI | CCGG | 2 cut(s) | 87, 1417 |
| BslFI | GGGAC | 3 cut(s) | 1027, 2063, 2338 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 86 |
| BsmAI | GTCTC | 3 cut(s) | 67, 1084, 2286 |
| BsmBI | CGTCTC | 1 cut(s) | 2286 |
| BsmFI | GGGAC | 3 cut(s) | 1027, 2063, 2338 |
| BsmI | GAATGC | 1 cut(s) | 496 |
| BsnI | GGCC | 5 cut(s) | 1215, 1222, 1528, 1847, 1944 |
| Bsp119I | TTCGAA | 1 cut(s) | 1367 |
| Bsp1286I | GDGCHC | 3 cut(s) | 765, 1191, 1557 |
| Bsp1407I | TGTACA | 1 cut(s) | 1565 |
| Bsp143I | GATC | 4 cut(s) | 108, 577, 1021, 1666 |
| BspANI | GGCC | 5 cut(s) | 1215, 1222, 1528, 1847, 1944 |
| BspCNI | CTCAG | 4 cut(s) | 2080, 2193, 2232, 2280 |
| BspFNI | CGCG | 1 cut(s) | 714 |
| BspHI | TCATGA | 1 cut(s) | 156 |
| BspLI | GGNNCC | 2 cut(s) | 1216, 1846 |
| BspMAI | CTGCAG | 1 cut(s) | 1903 |
| BspPI | GGATC | 1 cut(s) | 572 |
| BspT104I | TTCGAA | 1 cut(s) | 1367 |
| BspTI | CTTAAG | 1 cut(s) | 790 |
| BsrDI | GCAATG | 3 cut(s) | 668, 1013, 1351 |
| BsrGI | TGTACA | 1 cut(s) | 1565 |
| BsrI | ACTGG | 2 cut(s) | 181, 427 |
| BssECI | CCNNGG | 8 cut(s) | 17, 130, 581, 834, 1217, 1458, 1588, 1945 |
| BssMI | GATC | 4 cut(s) | 108, 577, 1021, 1666 |
| BssT1I | CCWWGG | 3 cut(s) | 130, 834, 1945 |
| Bst2UI | CCWGG | 3 cut(s) | 1219, 1460, 1589 |
| Bst4CI | ACNGT | 6 cut(s) | 436, 693, 1432, 1841, 2147, 2195 |
| Bst6I | CTCTTC | 1 cut(s) | 2269 |
| BstAFI | CTTAAG | 1 cut(s) | 790 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 680, 1898 |
| BstAUI | TGTACA | 1 cut(s) | 1565 |
| BstBAI | YACGTR | 1 cut(s) | 202 |
| BstBI | TTCGAA | 1 cut(s) | 1367 |
| BstC8I | GCNNGC | 6 cut(s) | 61, 196, 457, 516, 841, 1680 |
| BstDEI | CTNAG | 5 cut(s) | 1237, 2088, 2201, 2219, 2288 |
| BstF5I | GGATG | 8 cut(s) | 96, 393, 415, 615, 926, 1060, 1081, 2008 |
| BstFNI | CGCG | 1 cut(s) | 714 |
| BstHHI | GCGC | 2 cut(s) | 461, 714 |
| BstKTI | GATC | 4 cut(s) | 111, 580, 1024, 1669 |
| BstMAI | GTCTC | 3 cut(s) | 67, 1084, 2286 |
| BstMBI | GATC | 4 cut(s) | 108, 577, 1021, 1666 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 274, 680, 1043, 1136, 1802, 1853, 1898 |
| BstNI | CCWGG | 3 cut(s) | 1219, 1460, 1589 |
| BstNSI | RCATGY | 5 cut(s) | 63, 459, 899, 1574, 1659 |
| BstSCI | CCNGG | 3 cut(s) | 1217, 1458, 1587 |
| BstSFI | CTRYAG | 1 cut(s) | 1899 |
| BstUI | CGCG | 1 cut(s) | 714 |
| BstV1I | GCAGC | 4 cut(s) | 296, 1253, 1817, 1885 |
| BstV2I | GAAGAC | 1 cut(s) | 1320 |
| BstX2I | RGATCY | 1 cut(s) | 1021 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1988, 2269 |
| BstYI | RGATCY | 1 cut(s) | 1021 |
| BsuI | GTATCC | 2 cut(s) | 740, 1052 |
| BsuRI | GGCC | 5 cut(s) | 1215, 1222, 1528, 1847, 1944 |
| BtgZI | GCGATG | 1 cut(s) | 353 |
| BtrI | CACGTC | 1 cut(s) | 1708 |
| BtsCI | GGATG | 8 cut(s) | 96, 393, 415, 615, 926, 1060, 1081, 2008 |
| BtsI | GCAGTG | 2 cut(s) | 783, 942 |
| BtsIMutI | CAGTG | 6 cut(s) | 432, 783, 942, 1390, 1846, 2152 |
| Cac8I | GCNNGC | 6 cut(s) | 61, 196, 457, 516, 841, 1680 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1337, 1898 |
| CciI | TCATGA | 1 cut(s) | 156 |
| CfoI | GCGC | 2 cut(s) | 461, 714 |
| Cfr13I | GGNCC | 5 cut(s) | 21, 1214, 1527, 1845, 1942 |
| CseI | GACGC | 1 cut(s) | 2303 |
| Csp6I | GTAC | 3 cut(s) | 1566, 1622, 2196 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 955, 990 |
| CviQI | GTAC | 3 cut(s) | 1566, 1622, 2196 |
| DdeI | CTNAG | 5 cut(s) | 1237, 2088, 2201, 2219, 2288 |
| DpnI | GATC | 4 cut(s) | 110, 579, 1023, 1668 |
| DpnII | GATC | 4 cut(s) | 108, 577, 1021, 1666 |
| DraI | TTTAAA | 1 cut(s) | 555 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 28 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 28 |
| Eam1104I | CTCTTC | 1 cut(s) | 2269 |
| EarI | CTCTTC | 1 cut(s) | 2269 |
| Ecl136II | GAGCTC | 1 cut(s) | 1189 |
| Eco130I | CCWWGG | 3 cut(s) | 130, 834, 1945 |
| Eco24I | GRGCYC | 2 cut(s) | 765, 1191 |
| Eco47I | GGWCC | 1 cut(s) | 21 |
| Eco53kI | GAGCTC | 1 cut(s) | 1189 |
| Eco57I | CTGAAG | 2 cut(s) | 1002, 1314 |
| Eco72I | CACGTG | 1 cut(s) | 202 |
| EcoICRI | GAGCTC | 1 cut(s) | 1189 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1214, 1845 |
| EcoRI | GAATTC | 1 cut(s) | 730 |
| EcoRII | CCWGG | 3 cut(s) | 1217, 1458, 1587 |
| EcoT14I | CCWWGG | 3 cut(s) | 130, 834, 1945 |
| EcoT22I | ATGCAT | 2 cut(s) | 1657, 2142 |
| EcoT38I | GRGCYC | 2 cut(s) | 765, 1191 |
| ErhI | CCWWGG | 3 cut(s) | 130, 834, 1945 |
| Esp3I | CGTCTC | 1 cut(s) | 2286 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 818, 850, 1255, 1287 |
| FaqI | GGGAC | 3 cut(s) | 1027, 2063, 2338 |
| FauNDI | CATATG | 2 cut(s) | 642, 657 |
| FblI | GTMKAC | 1 cut(s) | 1584 |
| Fnu4HI | GCNGC | 4 cut(s) | 285, 1242, 1806, 1899 |
| FokI | GGATG | 8 cut(s) | 83, 400, 422, 622, 913, 1067, 1088, 1995 |
| FriOI | GRGCYC | 2 cut(s) | 765, 1191 |
| Fsp4HI | GCNGC | 4 cut(s) | 285, 1242, 1806, 1899 |
| FspBI | CTAG | 2 cut(s) | 131, 630 |
| GlaI | GCGC | 2 cut(s) | 460, 713 |
| GluI | GCNGC | 4 cut(s) | 285, 1242, 1806, 1899 |
| GsaI | CCCAGC | 2 cut(s) | 1088, 1686 |
| GsuI | CTGGAG | 1 cut(s) | 2169 |
| HaeIII | GGCC | 5 cut(s) | 1215, 1222, 1528, 1847, 1944 |
| HapII | CCGG | 2 cut(s) | 87, 1417 |
| HgaI | GACGC | 1 cut(s) | 2303 |
| HhaI | GCGC | 2 cut(s) | 461, 714 |
| Hin6I | GCGC | 2 cut(s) | 459, 712 |
| HinP1I | GCGC | 2 cut(s) | 459, 712 |
| HincII | GTYRAC | 3 cut(s) | 1081, 1585, 1996 |
| HindII | GTYRAC | 3 cut(s) | 1081, 1585, 1996 |
| HindIII | AAGCTT | 4 cut(s) | 512, 1264, 1772, 2264 |
| HinfI | GANTC | 8 cut(s) | 320, 382, 637, 806, 1103, 1484, 2025, 2090 |
| HpaI | GTTAAC | 1 cut(s) | 1081 |
| HpaII | CCGG | 2 cut(s) | 87, 1417 |
| HphI | GGTGA | 6 cut(s) | 41, 119, 587, 811, 823, 2300 |
| Hpy166II | GTNNAC | 9 cut(s) | 333, 432, 831, 1081, 1568, 1585, 1624, 1754, 1996 |
| Hpy188III | TCNNGA | 6 cut(s) | 142, 157, 1694, 2050, 2186, 2339 |
| Hpy8I | GTNNAC | 9 cut(s) | 333, 432, 831, 1081, 1568, 1585, 1624, 1754, 1996 |
| Hpy99I | CGWCG | 3 cut(s) | 34, 1709, 2108 |
| HpyAV | CCTTC | 6 cut(s) | 267, 484, 796, 1878, 1933, 2116 |
| HpyCH4III | ACNGT | 6 cut(s) | 436, 693, 1432, 1841, 2147, 2195 |
| HpyCH4IV | ACGT | 4 cut(s) | 201, 316, 1707, 2106 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 274, 680, 1043, 1136, 1802, 1853, 1898 |
| HpyF3I | CTNAG | 5 cut(s) | 1237, 2088, 2201, 2219, 2288 |
| HpySE526I | ACGT | 4 cut(s) | 201, 316, 1707, 2106 |
| HspAI | GCGC | 2 cut(s) | 459, 712 |
| KspAI | GTTAAC | 1 cut(s) | 1081 |
| Kzo9I | GATC | 4 cut(s) | 108, 577, 1021, 1666 |
| LmnI | GCTCC | 5 cut(s) | 709, 1186, 1596, 1617, 1824 |
| Lsp1109I | GCAGC | 4 cut(s) | 296, 1253, 1817, 1885 |
| MaeI | CTAG | 2 cut(s) | 131, 630 |
| MaeII | ACGT | 4 cut(s) | 201, 316, 1707, 2106 |
| MaeIII | GTNAC | 9 cut(s) | 257, 317, 421, 436, 651, 1512, 1537, 1686, 2237 |
| MalI | GATC | 4 cut(s) | 110, 579, 1023, 1668 |
| MboI | GATC | 4 cut(s) | 108, 577, 1021, 1666 |
| MfeI | CAATTG | 2 cut(s) | 1725, 2160 |
| MflI | RGATCY | 1 cut(s) | 1021 |
| MhlI | GDGCHC | 3 cut(s) | 765, 1191, 1557 |
| MlyI | GAGTC | 3 cut(s) | 314, 1097, 2099 |
| MmeI | TCCRAC | 3 cut(s) | 12, 855, 960 |
| MnlI | CCTC | 6 cut(s) | 27, 62, 576, 1205, 1608, 2228 |
| Mph1103I | ATGCAT | 2 cut(s) | 1657, 2142 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2283 |
| MslI | CAYNNNNRTG | 4 cut(s) | 132, 1302, 1782, 2145 |
| MspCI | CTTAAG | 1 cut(s) | 790 |
| MspI | CCGG | 2 cut(s) | 87, 1417 |
| MspR9I | CCNGG | 3 cut(s) | 1219, 1460, 1589 |
| MunI | CAATTG | 2 cut(s) | 1725, 2160 |
| Mva1269I | GAATGC | 1 cut(s) | 496 |
| MvaI | CCWGG | 3 cut(s) | 1219, 1460, 1589 |
| MvnI | CGCG | 1 cut(s) | 714 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 274, 680, 1043, 1136, 1802, 1853, 1898 |
| NdeI | CATATG | 2 cut(s) | 642, 657 |
| NdeII | GATC | 4 cut(s) | 108, 577, 1021, 1666 |
| NlaIV | GGNNCC | 2 cut(s) | 1216, 1846 |
| NmuCI | GTSAC | 4 cut(s) | 317, 421, 1512, 2237 |
| NsiI | ATGCAT | 2 cut(s) | 1657, 2142 |
| NspI | RCATGY | 5 cut(s) | 63, 459, 899, 1574, 1659 |
| NspV | TTCGAA | 1 cut(s) | 1367 |
| OliI | CACNNNNGTG | 1 cut(s) | 132 |
| PaeI | GCATGC | 2 cut(s) | 63, 459 |
| PagI | TCATGA | 1 cut(s) | 156 |
| PciI | ACATGT | 2 cut(s) | 895, 1570 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 335 |
| PctI | GAATGC | 1 cut(s) | 496 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2283 |
| PfeI | GAWTC | 5 cut(s) | 382, 637, 806, 1484, 2025 |
| PkrI | GCNGC | 4 cut(s) | 286, 1243, 1807, 1900 |
| PleI | GAGTC | 3 cut(s) | 314, 1097, 2098 |
| PmaCI | CACGTG | 1 cut(s) | 202 |
| PmlI | CACGTG | 1 cut(s) | 202 |
| PpsI | GAGTC | 3 cut(s) | 314, 1097, 2098 |
| Ppu21I | YACGTR | 1 cut(s) | 202 |
| PscI | ACATGT | 2 cut(s) | 895, 1570 |
| PshBI | ATTAAT | 1 cut(s) | 942 |
| PsiI | TTATAA | 1 cut(s) | 908 |
| Psp124BI | GAGCTC | 1 cut(s) | 1191 |
| Psp6I | CCWGG | 3 cut(s) | 1217, 1458, 1587 |
| PspCI | CACGTG | 1 cut(s) | 202 |
| PspFI | CCCAGC | 2 cut(s) | 1084, 1682 |
| PspGI | CCWGG | 3 cut(s) | 1217, 1458, 1587 |
| PspN4I | GGNNCC | 2 cut(s) | 1216, 1846 |
| PspPI | GGNCC | 5 cut(s) | 21, 1214, 1527, 1845, 1942 |
| PstI | CTGCAG | 1 cut(s) | 1903 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1337, 1898 |
| PsuI | RGATCY | 1 cut(s) | 1021 |
| RsaI | GTAC | 3 cut(s) | 1567, 1623, 2197 |
| RsaNI | GTAC | 3 cut(s) | 1566, 1622, 2196 |
| RseI | CAYNNNNRTG | 4 cut(s) | 132, 1302, 1782, 2145 |
| SacI | GAGCTC | 1 cut(s) | 1191 |
| SalI | GTCGAC | 1 cut(s) | 1583 |
| SatI | GCNGC | 4 cut(s) | 285, 1242, 1806, 1899 |
| Sau3AI | GATC | 4 cut(s) | 108, 577, 1021, 1666 |
| Sau96I | GGNCC | 5 cut(s) | 21, 1214, 1527, 1845, 1942 |
| SchI | GAGTC | 3 cut(s) | 314, 1097, 2099 |
| ScrFI | CCNGG | 3 cut(s) | 1219, 1460, 1589 |
| SduI | GDGCHC | 3 cut(s) | 765, 1191, 1557 |
| SfcI | CTRYAG | 1 cut(s) | 1899 |
| SfuI | TTCGAA | 1 cut(s) | 1367 |
| SinI | GGWCC | 1 cut(s) | 21 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 132, 1302, 1782, 2145 |
| SmlI | CTYRAG | 3 cut(s) | 790, 866, 1961 |
| SmoI | CTYRAG | 3 cut(s) | 790, 866, 1961 |
| SphI | GCATGC | 2 cut(s) | 63, 459 |
| SspMI | CTAG | 2 cut(s) | 131, 630 |
| SstI | GAGCTC | 1 cut(s) | 1191 |
| StyD4I | CCNGG | 3 cut(s) | 1217, 1458, 1587 |
| StyI | CCWWGG | 3 cut(s) | 130, 834, 1945 |
| TaaI | ACNGT | 6 cut(s) | 436, 693, 1432, 1841, 2147, 2195 |
| TaiI | ACGT | 4 cut(s) | 204, 319, 1710, 2109 |
| TaqI | TCGA | 7 cut(s) | 189, 207, 279, 464, 765, 1367, 1584 |
| TatI | WGTACW | 1 cut(s) | 1565 |
| TfiI | GAWTC | 5 cut(s) | 382, 637, 806, 1484, 2025 |
| TscAI | CASTG | 6 cut(s) | 439, 783, 942, 1390, 1846, 2152 |
| TseFI | GTSAC | 4 cut(s) | 317, 421, 1512, 2237 |
| TseI | GCWGC | 4 cut(s) | 284, 1241, 1805, 1898 |
| Tsp45I | GTSAC | 4 cut(s) | 317, 421, 1512, 2237 |
| TspGWI | ACGGA | 2 cut(s) | 722, 785 |
| TspRI | CASTG | 6 cut(s) | 439, 783, 942, 1390, 1846, 2152 |
| Vha464I | CTTAAG | 1 cut(s) | 790 |
| VpaK11BI | GGWCC | 1 cut(s) | 21 |
| VspI | ATTAAT | 1 cut(s) | 942 |
| XapI | RAATTY | 3 cut(s) | 730, 1293, 2252 |
| XceI | RCATGY | 5 cut(s) | 63, 459, 899, 1574, 1659 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2318 |
| XmaJI | CCTAGG | 1 cut(s) | 130 |
| XmiI | GTMKAC | 1 cut(s) | 1584 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2283 |
| XspI | CTAG | 2 cut(s) | 131, 630 |
| Zsp2I | ATGCAT | 2 cut(s) | 1657, 2142 |