Rh2BG198600

regulation of response to stimulus

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000307
Physical Location & Seq
Reverse (-)
18214877 .. 18223228
8352 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG198600.1

Sequence Viewer

Length: 2652 bp
ATGAGAATGCTGACACTCATGGATCTTTCCAACTGCCAATATCTAGTCACGACCCCTGACTTCAGTGAGGTCCCAAATCTTGAGAGATTGATCCTTGAAGGTTGTAAAGAGTTATCTGCGGTTCACCCAACAATTAGGGATCTCCAGCATCTGATTTTATTGAATTTGAAAGGCTGTGCAAGTCTAAAGAGCCTTCCCCCATCAATCAGCTTGAGATCTCTTCAAACTTTTATTCTTTCGGGATGTTCAAAACTGGAAGAGTTTCCAGAGATTGTGGGAAACATGCAAACTTTGTCAGAACTTTATTTAGATGGCACCGCTATAAGGGAGGTGCCTGTATCAATCCAGCTTTTAACAGGCCTTGTTTTGCTAAATCTATGTGGCTGCAAGAACCTTCCGAGTCTTCCAAGCGCTCTTTGTAGAAGTTTGACATCACTGAAATTTCTTTATCTGTCATGCTGCTCTAGTTTGGACAAACTGCCAGAAAACATAGGCTCCTTGGAACACTTGGAGGAGCTTGATGCATGTTATACTGCTATAAGAAAAGTGCCCGAGTCCATTTCACTACTCAAGAATCTTAAACTACTGTGTTTCCATGGCTGCTCTGGATACACAGGTCTAGAGATGCCAAACAAGTTCTCAGGTCTAAGATCTTTGACAACACTAAACCTAGGTGGATGTAATCTCCCAGAAGGAGCAATCCCCTTGCCAAAAGATCTTCCATCAAGACTAAGAACTATAAATTTACGGGACTGTCCTTTGCTGACAGATTCTTCATATAATTCGATGAGATATCCACCTCGAAAGGGTTTAAGTACTATCATAAGTTGTCGAAAACCGGAGGAGGATGAGCAGTTGCCAATATTACTACCTGAACTCCATGAGGTGTCTCTTTCTCTGCAGTTGCCAATGCTACCTGAACTCCATGAGTTTCGTTTGGGAAATCTGGAAAAACTCGACCTTTCCTACTGCCAACACTTGAAGAAGATCCCTGACTTGAATGGGGTTCCAAACCTTAAGAAATTGATCCTTGAAGGTTGTGAAAAATTATCAGAGGTTCACCCAACATTTGGGAGTCTCCAACATCTGATTTTTTTGAATATGAAAGGATGTGTAGATCTAGAGAGCCTTCCCCGCTTCATCTGCATGAAATATCTTGAAATCTGTATTCTTTCAGGATGTTCAAAGCTTAAAGAGTTTCCAGAGATTAATGGCGATATGGATAAATTGTCACAACTGCATTTAGATGGGACGGCTTTAGAGAATCTGCTGATACCAATGCAGCATTTGAAATGCCCTATTGTGATAAATCTAAGAGGTTGCAAGAACCTATTGACTATTCCAATCCTTTTGAGTCTGAAAGCTCTCAATCTGTCAGGCTGCTCTCGTATATCCAGATTTCCAAATAACTTGGGAAGCATGGCACATTTGGAGGAGCTTGATGCCTCTGAAACTGCTATAACACGAGTACCCCAGTCCATTTCATTTATGGAGAAGCTTAAAGTGTTGTCTTTCTGTGGATGTAAAGGTTTGCAGTTGCCTAACCGGTTCTCGCAATTAAGCTTTTTGACATCATTAAATCTACGGAGGTGTGATCTAGCAGAACTAACAGTCCTTGCTAGCCTCTGTGGCTTATCCTCACTGCAAAAGTTGGATTTGAGTGGAAACAAATTTGTGAGTATACCTAGTGAAATTAGTCGCTTATCCTCTTTGAAGCGATTGAATTTGAGTAGGAACGACTTGGTGAGTATACCAGATGCAATTGGTGGCTTATCCTCTTTGCAGCGATTGGATTTGAGTACGAACGACTTGGTGAGTATACCAGATGCAATTGGTGGCTTATCCTCTTTGCAGCGATTGGATTTGAGTACGAACGACTTGGTGAGTATACCAGATGCAATTGGTGGCTTATCCTCTTTGCAGCGATTGGATTTGAGTACGAACGACTTGGTGAGTATACCAGATGCAATTGGTCGGCTTTCCTCTTTGCAGCGATTGGATTTGAGTACGAACGACTTGGTGAGTATACCAGATGCAATTGGTCGGCTTTCCTCTTTGCAGCGATTGGATTTGAGTATGAACAACTTGGTGAGTATACCAGATGCAACTGGTGGCTTATCCTCTTTGCTGCGATTGGATTTGAGTATGAATGACTTGGTGAGTATACCAGATGCAACTGGTGGCTTATCCTCTTTGCAGCGATTGGATTTGAGTATGAATGACTTGGTGAGTATACCAGATGCAACTGGTGGCTTATCCTCTTTGCAGCGATTGGATTTGAGTATGAACGACTTGGTGAGTATACCAGATGCAATTGGTCGACTCTCCTCTTTGCAGCGATTGGATTTGAGTACGAACGACTTGGTGAGTATACCAGATGCAATTGGTCGACTTTCCTCTTTGCAGCGATTGGATTTGAGTCTGAACGACTTGGTGAGTATACCAGATGCAATTGGTGGCTTATCCTCTTTGCAGCGATTGGATTTGAGTGCGAACGACTTAGTGAGTATACCCGATGCAATTGATCAACTCTCCTTGTTGGAGCGATTGGATTTGAGTAGGAACAAGCTGGTGAGCATACCAGATGCAATCGGTCTCTTAACATCCTTGAAGCATTTAGATTGGAGTGAAAACAACTCTCTGAGTAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8

Protein Analysis

883

Amino Acids

96.4

Weight (kDa)

5.34

Isoelectric Point (pI)

35.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 18 - 121 2e-06 Leucine-rich repeat region
LRR_14 PF23598 44 - 151 1.7e-07 Leucine-rich repeat region
LRR_13 PF23286 71 - 139 6.5e-09 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 123 - 224 1.7e-12 Leucine-rich repeat region
LRR_14 PF23598 431 - 554 8e-11 Leucine-rich repeat region
LRR_14 PF23598 516 - 623 6.2e-13 Leucine-rich repeat region
LRR_8 PF13855 547 - 604 3e-12 Leucine rich repeat
LRR_14 PF23598 564 - 668 5.8e-14 Leucine-rich repeat region
LRR_8 PF13855 608 - 650 3.2e-08 Leucine rich repeat
LRR_8 PF13855 655 - 696 1e-06 Leucine rich repeat
LRR_14 PF23598 656 - 738 9.2e-10 Leucine-rich repeat region
LRR_8 PF13855 685 - 742 8.6e-10 Leucine rich repeat
LRR_14 PF23598 735 - 806 9.6e-08 Leucine-rich repeat region
LRR_8 PF13855 742 - 788 2.7e-07 Leucine rich repeat
LRR_8 PF13855 793 - 834 4.3e-08 Leucine rich repeat
LRR_14 PF23598 805 - 876 7.2e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000307)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g16600 FvH4_1g16610 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16621 FvH4_1g16630 FvH4_1g16640 FvH4_1g16640 FvH4_1g16650 FvH4_1g16650 FvH4_3g27631 FvH4_4g11392 FvH4_4g11542
prunus_persica Prupe.4G224500_v2.0.a1 Prupe.4G226900_v2.0.a1 Prupe.4G227000_v2.0.a1
pyrus_communis pycom11g18180 pycom11g18210 pycom11g18230 pycom11g18270 pycom11g18350 pycom11g18360 pycom11g18370
rosa_chinensis RchiOBHm_Chr2g0106511 RchiOBHm_Chr2g0106541 RchiOBHm_Chr2g0106551 RchiOBHm_Chr2g0106571 RchiOBHm_Chr2g0124621 RchiOBHm_Chr6g0251591 RchiOBHm_Chr6g0251631 RchiOBHm_Chr6g0251641
rosa_laevigata RLG00000015443 RLG00000015444 RLG00000015458 RLG00000017510 RLG00000017511 RLG00000017512 RLG00000017515 RLG00000017516 RLG00000017517 RLG00000018809 RLG00000020934 RLG00000020935 RLG00000034092
rosa_multiflora Rmu_co8285777.1_g000001 Rmu_sc0000762.1_g000001 Rmu_sc0001872.1_g000006 Rmu_sc0005255.1_g000019 Rmu_sc0005597.1_g000006 Rmu_sc0012104.1_g000001 Rmu_sc0017105.1_g000011 Rmu_sc0022904.1_g000001 Rmu_ssc0000135.1_g000049 Rmu_ssc0000213.1_g000047
rosa_roxburghii Rroxscaffold_2G00092830 Rroxscaffold_2G00119790 Rroxscaffold_2G00137010 Rroxscaffold_2G00137030 Rroxscaffold_2G00137070 Rroxscaffold_7G00216560
rosa_rugosa Rorug02G0136100 Rorug02G0136200 Rorug02G0136300 Rorug02G0136400 Rorug02G0251800 Rorug02G0251800 Rorug02G0455500 Rorug02G0455600 Rorug02G0455700 Rorug05G0195300
rosa_samantha Rh2AG187400 Rh2AG187500 Rh2AG187600 Rh2AG310500 Rh2BG198200 Rh2BG198300 Rh2BG198400 Rh2BG198600 Rh2BG318900 Rh2BG534300 Rh2CG192400 Rh2CG192500 Rh2CG192600 Rh2CG297500 Rh2DG193500 Rh2DG193600 Rh2DG193800 Rh2DG334200 Rh2DG543100 Rh5AG280400 Rh5BG285800 Rh5BG285900 Rh5CG317900 Rh5CG318000 Rh5DG294600 Rh5DG294700 Rh6AG012200 Rh6AG012700 Rh6BG011200 Rh6BG011700
rosa_wichuraiana Rw0G009380 Rw2G014610 Rw2G014630 Rw2G014640 Rw2G014680 Rw2G025120 Rw2G043000 Rw5G026490 Rw6G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 314, 331
AccB7I CCANNNNNTGG 1 cut(s) 1070
AciI CCGC 3 cut(s) 119, 318, 1135
AclWI GGATC 5 cut(s) 30, 85, 147, 982, 1021
AcsI RAATTY 5 cut(s) 163, 440, 742, 1670, 1723
AcuI CTGAAG 1 cut(s) 46
AfaI GTAC 7 cut(s) 817, 1470, 1801, 1870, 1939, 2008, 2353
AfeI AGCGCT 1 cut(s) 412
AfiI CCNNNNNNNGG 3 cut(s) 324, 806, 1070
AflII CTTAAG 1 cut(s) 1016
AgeI ACCGGT 1 cut(s) 1545
AloI GAACNNNNNNTCC 2 cut(s) 1596, 1628
AluBI AGCT 9 cut(s) 210, 349, 517, 1189, 1364, 1438, 1498, 1563, 2569
AluI AGCT 9 cut(s) 210, 349, 517, 1189, 1364, 1438, 1498, 1563, 2569
Alw26I GTCTC 3 cut(s) 894, 1082, 2600
AlwI GGATC 5 cut(s) 30, 85, 147, 982, 1021
AlwNI CAGNNNCTG 1 cut(s) 151
Ama87I CYCGRG 1 cut(s) 551
Aor51HI AGCGCT 1 cut(s) 412
AoxI GGCC 1 cut(s) 358
ApoI RAATTY 5 cut(s) 163, 440, 742, 1670, 1723
AseI ATTAAT 1 cut(s) 1209
AsiGI ACCGGT 1 cut(s) 1545
Asp700I GAANNNNTTC 1 cut(s) 261
AspA2I CCTAGG 1 cut(s) 670
AspLEI GCGC 1 cut(s) 413
AspS9I GGNCC 1 cut(s) 70
AsuNHI GCTAGC 1 cut(s) 1619
AvaI CYCGRG 1 cut(s) 551
AvaII GGWCC 1 cut(s) 70
AvrII CCTAGG 1 cut(s) 670
BaeGI GKGCMC 1 cut(s) 552
BaeI ACNNNNGTAYC 4 cut(s) 601, 634, 1452, 1485
BanI GGYRCC 2 cut(s) 314, 331
BauI CACGAG 1 cut(s) 1464
BbsI GAAGAC 1 cut(s) 395
BccI CCATC 4 cut(s) 208, 305, 730, 1241
BceAI ACGGC 1 cut(s) 1269
BciVI GTATCC 1 cut(s) 602
BclI TGATCA 1 cut(s) 2524
BcoDI GTCTC 3 cut(s) 894, 1082, 2600
BfaI CTAG 8 cut(s) 44, 465, 620, 671, 1121, 1598, 1620, 1686
BfmI CTRYAG 1 cut(s) 899
BfoI RGCGCY 1 cut(s) 414
BfrI CTTAAG 1 cut(s) 1016
BfuI GTATCC 1 cut(s) 602
BglI GCCNNNNNGGC 1 cut(s) 1629
BglII AGATCT 4 cut(s) 215, 650, 715, 1117
BlnI CCTAGG 1 cut(s) 670
BmcAI AGTACT 1 cut(s) 817
Bme18I GGWCC 1 cut(s) 70
BmeT110I CYCGRG 1 cut(s) 551
BmgT120I GGNCC 1 cut(s) 70
BmiI GGNNCC 5 cut(s) 72, 316, 333, 496, 1008
BmrI ACTGGG 1 cut(s) 1468
BmtI GCTAGC 1 cut(s) 1623
BmuI ACTGGG 1 cut(s) 1468
BpiI GAAGAC 1 cut(s) 395
BpmI CTGGAG 1 cut(s) 128
BpuEI CTTGAG 3 cut(s) 101, 232, 554
BsaI GGTCTC 1 cut(s) 2600
BsaJI CCNNGG 3 cut(s) 498, 595, 670
BsaWI WCCGGW 2 cut(s) 838, 1545
BsaXI ACNNNNNCTCC 6 cut(s) 479, 509, 861, 891, 906, 936
Bsc4I CCNNNNNNNGG 3 cut(s) 324, 806, 1070
Bse118I RCCGGY 1 cut(s) 1545
Bse1I ACTGG 5 cut(s) 258, 1474, 2113, 2182, 2251
BseDI CCNNGG 3 cut(s) 498, 595, 670
BseGI GGATG 7 cut(s) 248, 683, 853, 1115, 1184, 1526, 2603
BseLI CCNNNNNNNGG 3 cut(s) 324, 806, 1070
BseMII CTCAG 2 cut(s) 654, 2633
BseNI ACTGG 5 cut(s) 258, 1474, 2113, 2182, 2251
BseRI GAGGAG 4 cut(s) 527, 857, 1448, 2317
BseSI GKGCMC 1 cut(s) 552
BshFI GGCC 1 cut(s) 360
BshNI GGYRCC 2 cut(s) 314, 331
BshTI ACCGGT 1 cut(s) 1545
BsiHKCI CYCGRG 1 cut(s) 551
BsiSI CCGG 2 cut(s) 839, 1546
BslFI GGGAC 3 cut(s) 56, 764, 1264
BslI CCNNNNNNNGG 3 cut(s) 324, 806, 1070
BsmAI GTCTC 3 cut(s) 894, 1082, 2600
BsmFI GGGAC 3 cut(s) 56, 764, 1264
BsmI GAATGC 1 cut(s) 12
BsnI GGCC 1 cut(s) 360
Bso31I GGTCTC 1 cut(s) 2600
BsoBI CYCGRG 1 cut(s) 551
Bsp1286I GDGCHC 1 cut(s) 552
Bsp19I CCATGG 1 cut(s) 595
BspACI CCGC 3 cut(s) 119, 318, 1135
BspANI GGCC 1 cut(s) 360
BspCNI CTCAG 2 cut(s) 653, 2634
BspLI GGNNCC 5 cut(s) 72, 316, 333, 496, 1008
BspMAI CTGCAG 1 cut(s) 903
BspOI GCTAGC 1 cut(s) 1623
BspPI GGATC 5 cut(s) 30, 85, 147, 982, 1021
BspT107I GGYRCC 2 cut(s) 314, 331
BspTI CTTAAG 1 cut(s) 1016
BspTNI GGTCTC 1 cut(s) 2600
BsrFI RCCGGY 1 cut(s) 1545
BsrI ACTGG 5 cut(s) 258, 1474, 2113, 2182, 2251
BssAI RCCGGY 1 cut(s) 1545
BssECI CCNNGG 3 cut(s) 498, 595, 670
BssSI CACGAG 1 cut(s) 1464
BssT1I CCWWGG 3 cut(s) 498, 595, 670
Bst2BI CACGAG 1 cut(s) 1464
Bst4CI ACNGT 3 cut(s) 588, 755, 1612
Bst6I CTCTTC 2 cut(s) 225, 252
BstAFI CTTAAG 1 cut(s) 1016
BstC8I GCNNGC 1 cut(s) 1621
BstDEI CTNAG 6 cut(s) 640, 647, 731, 1313, 2500, 2642
BstDSI CCRYGG 1 cut(s) 595
BstF5I GGATG 7 cut(s) 248, 683, 853, 1115, 1184, 1526, 2603
BstH2I RGCGCY 1 cut(s) 414
BstHHI GCGC 1 cut(s) 413
BstMAI GTCTC 3 cut(s) 894, 1082, 2600
BstMWI GCNNNNNNNGC 3 cut(s) 1134, 1143, 1629
BstNSI RCATGY 2 cut(s) 286, 528
BstSFI CTRYAG 1 cut(s) 899
BstSLI GKGCMC 1 cut(s) 552
BstV2I GAAGAC 1 cut(s) 395
BstX2I RGATCY 7 cut(s) 22, 139, 215, 650, 715, 987, 1117
BstYI RGATCY 7 cut(s) 22, 139, 215, 650, 715, 987, 1117
BsuI GTATCC 1 cut(s) 602
BsuRI GGCC 1 cut(s) 360
BtgI CCRYGG 1 cut(s) 595
BtsCI GGATG 7 cut(s) 248, 683, 853, 1115, 1184, 1526, 2603
BtsI GCAGTG 1 cut(s) 1640
BtsIMutI CAGTG 3 cut(s) 70, 434, 1640
Cac8I GCNNGC 1 cut(s) 1621
CaiI CAGNNNCTG 1 cut(s) 151
CfoI GCGC 1 cut(s) 413
Cfr10I RCCGGY 1 cut(s) 1545
Cfr13I GGNCC 1 cut(s) 70
Csp6I GTAC 7 cut(s) 816, 1469, 1800, 1869, 1938, 2007, 2352
CspAI ACCGGT 1 cut(s) 1545
CviAII CATG 9 cut(s) 19, 283, 456, 525, 596, 881, 926, 1147, 1420
CviQI GTAC 7 cut(s) 816, 1469, 1800, 1869, 1938, 2007, 2352
DdeI CTNAG 6 cut(s) 640, 647, 731, 1313, 2500, 2642
Eam1104I CTCTTC 2 cut(s) 225, 252
EarI CTCTTC 2 cut(s) 225, 252
Eco130I CCWWGG 3 cut(s) 498, 595, 670
Eco147I AGGCCT 1 cut(s) 360
Eco31I GGTCTC 1 cut(s) 2600
Eco32I GATATC 1 cut(s) 794
Eco47I GGWCC 1 cut(s) 70
Eco47III AGCGCT 1 cut(s) 412
Eco57I CTGAAG 1 cut(s) 46
Eco88I CYCGRG 1 cut(s) 551
EcoO109I RGGNCCY 1 cut(s) 70
EcoRV GATATC 1 cut(s) 794
EcoT14I CCWWGG 3 cut(s) 498, 595, 670
EcoT22I ATGCAT 1 cut(s) 526
ErhI CCWWGG 3 cut(s) 498, 595, 670
FaeI CATG 9 cut(s) 22, 286, 459, 528, 599, 884, 929, 1150, 1423
FaqI GGGAC 3 cut(s) 56, 764, 1264
FatI CATG 9 cut(s) 18, 282, 455, 524, 595, 880, 925, 1146, 1419
FauI CCCGC 1 cut(s) 1142
FbaI TGATCA 1 cut(s) 2524
FokI GGATG 7 cut(s) 255, 690, 860, 1122, 1191, 1533, 2590
FspBI CTAG 8 cut(s) 44, 465, 620, 671, 1121, 1598, 1620, 1686
GlaI GCGC 1 cut(s) 412
GsuI CTGGAG 1 cut(s) 128
HaeII RGCGCY 1 cut(s) 414
HaeIII GGCC 1 cut(s) 360
HapII CCGG 2 cut(s) 839, 1546
HhaI GCGC 1 cut(s) 413
Hin1II CATG 9 cut(s) 22, 286, 459, 528, 599, 884, 929, 1150, 1423
Hin6I GCGC 1 cut(s) 411
HinP1I GCGC 1 cut(s) 411
HincII GTYRAC 2 cut(s) 2321, 2390
HindII GTYRAC 2 cut(s) 2321, 2390
HindIII AAGCTT 3 cut(s) 1187, 1496, 1561
HinfI GANTC 9 cut(s) 400, 554, 574, 770, 1075, 1264, 1354, 2322, 2419
HpaII CCGG 2 cut(s) 839, 1546
Hpy188I TCNGA 9 cut(s) 153, 298, 399, 1054, 1089, 1359, 1450, 2424, 2643
HpyAV CCTTC 6 cut(s) 92, 203, 404, 686, 1028, 1139
HpyCH4III ACNGT 3 cut(s) 588, 755, 1612
HpyF10VI GCNNNNNNNGC 3 cut(s) 1134, 1143, 1629
HpyF3I CTNAG 6 cut(s) 640, 647, 731, 1313, 2500, 2642
Hsp92II CATG 9 cut(s) 22, 286, 459, 528, 599, 884, 929, 1150, 1423
HspAI GCGC 1 cut(s) 411
Ksp22I TGATCA 1 cut(s) 2524
LmnI GCTCC 5 cut(s) 500, 514, 695, 1435, 2542
MaeI CTAG 8 cut(s) 44, 465, 620, 671, 1121, 1598, 1620, 1686
MaeIII GTNAC 3 cut(s) 46, 1230, 2645
MboII GAAGA 7 cut(s) 212, 269, 395, 710, 765, 994, 997
MfeI CAATTG 9 cut(s) 1761, 1830, 1899, 1968, 2037, 2313, 2382, 2451, 2520
MflI RGATCY 7 cut(s) 22, 139, 215, 650, 715, 987, 1117
MhlI GDGCHC 1 cut(s) 552
MlyI GAGTC 6 cut(s) 409, 563, 1084, 1363, 2316, 2428
MmeI TCCRAC 4 cut(s) 54, 1105, 1632, 2520
Mph1103I ATGCAT 1 cut(s) 526
MroXI GAANNNNTTC 1 cut(s) 261
MslI CAYNNNNRTG 2 cut(s) 1145, 1245
MspCI CTTAAG 1 cut(s) 1016
MspI CCGG 2 cut(s) 839, 1546
MunI CAATTG 9 cut(s) 1761, 1830, 1899, 1968, 2037, 2313, 2382, 2451, 2520
Mva1269I GAATGC 1 cut(s) 12
MwoI GCNNNNNNNGC 3 cut(s) 1134, 1143, 1629
NcoI CCATGG 1 cut(s) 595
NheI GCTAGC 1 cut(s) 1619
NlaIII CATG 9 cut(s) 22, 286, 459, 528, 599, 884, 929, 1150, 1423
NlaIV GGNNCC 5 cut(s) 72, 316, 333, 496, 1008
NmuCI GTSAC 2 cut(s) 46, 1230
NsiI ATGCAT 1 cut(s) 526
NspI RCATGY 2 cut(s) 286, 528
PceI AGGCCT 1 cut(s) 360
PctI GAATGC 1 cut(s) 12
PdmI GAANNNNTTC 1 cut(s) 261
PfeI GAWTC 3 cut(s) 574, 770, 1264
PflMI CCANNNNNTGG 1 cut(s) 1070
PinAI ACCGGT 1 cut(s) 1545
PleI GAGTC 6 cut(s) 408, 562, 1083, 1362, 2316, 2427
PpsI GAGTC 6 cut(s) 408, 562, 1083, 1362, 2316, 2427
PpuMI RGGWCCY 1 cut(s) 70
PshBI ATTAAT 1 cut(s) 1209
Psp5II RGGWCCY 1 cut(s) 70
PspN4I GGNNCC 5 cut(s) 72, 316, 333, 496, 1008
PspPI GGNCC 1 cut(s) 70
PspPPI RGGWCCY 1 cut(s) 70
PstI CTGCAG 1 cut(s) 903
PstNI CAGNNNCTG 1 cut(s) 151
PsuI RGATCY 7 cut(s) 22, 139, 215, 650, 715, 987, 1117
RsaI GTAC 7 cut(s) 817, 1470, 1801, 1870, 1939, 2008, 2353
RsaNI GTAC 7 cut(s) 816, 1469, 1800, 1869, 1938, 2007, 2352
RseI CAYNNNNRTG 2 cut(s) 1145, 1245
SalI GTCGAC 2 cut(s) 2319, 2388
Sau96I GGNCC 1 cut(s) 70
ScaI AGTACT 1 cut(s) 817
SchI GAGTC 6 cut(s) 409, 563, 1084, 1363, 2316, 2428
SduI GDGCHC 1 cut(s) 552
SfcI CTRYAG 1 cut(s) 899
SinI GGWCC 1 cut(s) 70
SmiMI CAYNNNNRTG 2 cut(s) 1145, 1245
SmlI CTYRAG 4 cut(s) 80, 211, 569, 1016
SmoI CTYRAG 4 cut(s) 80, 211, 569, 1016
SseBI AGGCCT 1 cut(s) 360
SsiI CCGC 3 cut(s) 119, 318, 1135
SspI AATATT 1 cut(s) 864
SspMI CTAG 8 cut(s) 44, 465, 620, 671, 1121, 1598, 1620, 1686
StuI AGGCCT 1 cut(s) 360
StyI CCWWGG 3 cut(s) 498, 595, 670
TaaI ACNGT 3 cut(s) 588, 755, 1612
TaqI TCGA 6 cut(s) 785, 802, 832, 957, 2320, 2389
TaqII GACCGA 1 cut(s) 2582
TatI WGTACW 1 cut(s) 815
TfiI GAWTC 3 cut(s) 574, 770, 1264
TscAI CASTG 3 cut(s) 70, 441, 1647
TseFI GTSAC 2 cut(s) 46, 1230
Tsp45I GTSAC 2 cut(s) 46, 1230
TspDTI ATGAA 9 cut(s) 765, 1118, 1129, 1163, 1473, 2093, 2162, 2231, 2300
TspGWI ACGGA 1 cut(s) 1600
TspRI CASTG 3 cut(s) 70, 441, 1647
Van91I CCANNNNNTGG 1 cut(s) 1070
Vha464I CTTAAG 1 cut(s) 1016
VpaK11BI GGWCC 1 cut(s) 70
VspI ATTAAT 1 cut(s) 1209
XapI RAATTY 5 cut(s) 163, 440, 742, 1670, 1723
XbaI TCTAGA 2 cut(s) 619, 1120
XceI RCATGY 2 cut(s) 286, 528
XcmI CCANNNNNNNNNTGG 2 cut(s) 602, 1486
XmaJI CCTAGG 1 cut(s) 670
XmnI GAANNNNTTC 1 cut(s) 261
XspI CTAG 8 cut(s) 44, 465, 620, 671, 1121, 1598, 1620, 1686
ZrmI AGTACT 1 cut(s) 817
Zsp2I ATGCAT 1 cut(s) 526
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.