positive regulation of cell-substrate adhesion
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 56 - 227 | 6.4e-55 | TIR domain |
| TIR_2 | PF13676 | 58 - 155 | 3.2e-14 | TIR domain |
| NB-ARC | PF00931 | 244 - 409 | 2.5e-20 | NB-ARC domain |
| WHD_ROQ1 | PF23282 | 477 - 546 | 5.3e-19 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 748 - 816 | 4.4e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 791 - 901 | 1.4e-12 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 1142 - 1252 | 2e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 1241 - 1328 | 1e-09 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 1244 - 1280 | 5.5e-07 | Leucine rich repeat |
| C-JID | PF20160 | 1948 - 2085 | 3.6e-07 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1103, 1860 |
| AatII | GACGTC | 2 cut(s) | 5135, 5894 |
| Acc16I | TGCGCA | 1 cut(s) | 2209 |
| Acc36I | ACCTGC | 2 cut(s) | 1650, 4790 |
| Acc65I | GGTACC | 2 cut(s) | 3568, 6894 |
| AccB1I | GGYRCC | 5 cut(s) | 3568, 5312, 6872, 6894, 6976 |
| AccB7I | CCANNNNNTGG | 5 cut(s) | 2165, 2182, 2383, 3176, 4269 |
| AccBSI | CCGCTC | 2 cut(s) | 1063, 6486 |
| AccI | GTMKAC | 3 cut(s) | 1093, 3916, 6618 |
| AccII | CGCG | 1 cut(s) | 4510 |
| AccIII | TCCGGA | 3 cut(s) | 587, 4082, 6412 |
| AcoI | YGGCCR | 2 cut(s) | 6505, 6888 |
| AcuI | CTGAAG | 7 cut(s) | 1871, 2077, 3761, 5545, 5678, 6105, 6728 |
| AcvI | CACGTG | 2 cut(s) | 3488, 5165 |
| AcyI | GRCGYC | 3 cut(s) | 3181, 5132, 5891 |
| AdeI | CACNNNGTG | 1 cut(s) | 6879 |
| AfeI | AGCGCT | 1 cut(s) | 1251 |
| AflII | CTTAAG | 2 cut(s) | 1777, 3122 |
| AflIII | ACRYGT | 4 cut(s) | 3487, 5155, 5164, 5332 |
| AgeI | ACCGGT | 1 cut(s) | 6973 |
| AjiI | CACGTC | 2 cut(s) | 4147, 4853 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1430, 1462 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 417, 449, 2777, 2809 |
| Alw21I | GWGCWC | 2 cut(s) | 2495, 5072 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2182, 2770, 4733 |
| Ama87I | CYCGRG | 2 cut(s) | 36, 2582 |
| Aor13HI | TCCGGA | 3 cut(s) | 587, 4082, 6412 |
| Aor51HI | AGCGCT | 1 cut(s) | 1251 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1027, 1059 |
| AsiGI | ACCGGT | 1 cut(s) | 6973 |
| Asp700I | GAANNNNTTC | 9 cut(s) | 276, 435, 627, 1191, 1214, 2223, 2292, 3303, 4862 |
| Asp718I | GGTACC | 2 cut(s) | 3568, 6894 |
| AspA2I | CCTAGG | 1 cut(s) | 2701 |
| AspLEI | GCGC | 4 cut(s) | 1252, 2210, 5210, 6819 |
| AsuC2I | CCSGG | 3 cut(s) | 1647, 5379, 6456 |
| AsuII | TTCGAA | 2 cut(s) | 1692, 2254 |
| AvaI | CYCGRG | 2 cut(s) | 36, 2582 |
| AvaII | GGWCC | 5 cut(s) | 4204, 4433, 5242, 5554, 6291 |
| AvrII | CCTAGG | 1 cut(s) | 2701 |
| BaeGI | GKGCMC | 2 cut(s) | 2583, 6981 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 3552, 3560, 3585, 3593 |
| BalI | TGGCCA | 1 cut(s) | 6890 |
| BamHI | GGATCC | 1 cut(s) | 5102 |
| BanI | GGYRCC | 5 cut(s) | 3568, 5312, 6872, 6894, 6976 |
| BanII | GRGCYC | 1 cut(s) | 1124 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 5008, 5040 |
| BauI | CACGAG | 1 cut(s) | 5936 |
| BbrPI | CACGTG | 2 cut(s) | 3488, 5165 |
| BbsI | GAAGAC | 5 cut(s) | 166, 2426, 4173, 5292, 5886 |
| Bbv12I | GWGCWC | 2 cut(s) | 2495, 5072 |
| BceAI | ACGGC | 4 cut(s) | 508, 2364, 5244, 6830 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1607, 1641, 6095, 6129 |
| BciVI | GTATCC | 1 cut(s) | 3502 |
| BclI | TGATCA | 2 cut(s) | 4132, 4969 |
| BcnI | CCSGG | 3 cut(s) | 1647, 5379, 6456 |
| BfoI | RGCGCY | 3 cut(s) | 1253, 5211, 6820 |
| BfrI | CTTAAG | 2 cut(s) | 1777, 3122 |
| BfuAI | ACCTGC | 2 cut(s) | 1650, 4790 |
| BfuI | GTATCC | 1 cut(s) | 3502 |
| BglII | AGATCT | 3 cut(s) | 2246, 2681, 2881 |
| BlnI | CCTAGG | 1 cut(s) | 2701 |
| BmcAI | AGTACT | 2 cut(s) | 3083, 5440 |
| Bme18I | GGWCC | 5 cut(s) | 4204, 4433, 5242, 5554, 6291 |
| BmeT110I | CYCGRG | 2 cut(s) | 36, 2582 |
| BmgBI | CACGTC | 2 cut(s) | 4147, 4853 |
| BmrI | ACTGGG | 5 cut(s) | 3234, 4145, 4760, 5542, 6135 |
| BmuI | ACTGGG | 5 cut(s) | 3234, 4145, 4760, 5542, 6135 |
| BoxI | GACNNNNGTC | 1 cut(s) | 5994 |
| BpiI | GAAGAC | 5 cut(s) | 166, 2426, 4173, 5292, 5886 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1047, 1079 |
| BpmI | CTGGAG | 8 cut(s) | 758, 1074, 2159, 4869, 5463, 5495, 5569, 6789 |
| Bpu10I | CCTNAGC | 1 cut(s) | 810 |
| Bpu14I | TTCGAA | 2 cut(s) | 1692, 2254 |
| BpuEI | CTTGAG | 7 cut(s) | 2132, 2263, 2479, 2585, 5093, 6052, 6583 |
| BpuMI | CCSGG | 3 cut(s) | 1647, 5379, 6456 |
| Bsa29I | ATCGAT | 1 cut(s) | 3792 |
| BsaAI | YACGTR | 3 cut(s) | 2915, 3488, 5165 |
| BsaBI | GATNNNNATC | 3 cut(s) | 877, 4131, 6966 |
| BsaHI | GRCGYC | 3 cut(s) | 3181, 5132, 5891 |
| BsaI | GGTCTC | 3 cut(s) | 33, 587, 2603 |
| BsaWI | WCCGGW | 4 cut(s) | 587, 4082, 6412, 6973 |
| Bse118I | RCCGGY | 3 cut(s) | 5315, 6246, 6973 |
| Bse3DI | GCAATG | 7 cut(s) | 1452, 4197, 4699, 4852, 5625, 6694, 6855 |
| Bse8I | GATNNNNATC | 3 cut(s) | 877, 4131, 6966 |
| BseAI | TCCGGA | 3 cut(s) | 587, 4082, 6412 |
| BseCI | ATCGAT | 1 cut(s) | 3792 |
| BseJI | GATNNNNATC | 3 cut(s) | 877, 4131, 6966 |
| BseMI | GCAATG | 7 cut(s) | 1452, 4197, 4699, 4852, 5625, 6694, 6855 |
| BseSI | GKGCMC | 2 cut(s) | 2583, 6981 |
| BseYI | CCCAGC | 2 cut(s) | 4478, 6513 |
| BsgI | GTGCAG | 1 cut(s) | 5403 |
| Bsh1236I | CGCG | 1 cut(s) | 4510 |
| Bsh1285I | CGRYCG | 2 cut(s) | 3796, 6974 |
| BshNI | GGYRCC | 5 cut(s) | 3568, 5312, 6872, 6894, 6976 |
| BshTI | ACCGGT | 1 cut(s) | 6973 |
| BshVI | ATCGAT | 1 cut(s) | 3792 |
| BsiEI | CGRYCG | 2 cut(s) | 3796, 6974 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2495, 5072 |
| BsiHKCI | CYCGRG | 2 cut(s) | 36, 2582 |
| BslFI | GGGAC | 8 cut(s) | 438, 3364, 4133, 4350, 4854, 5143, 5621, 5992 |
| BsmBI | CGTCTC | 3 cut(s) | 3188, 3374, 6242 |
| BsmFI | GGGAC | 8 cut(s) | 438, 3364, 4133, 4350, 4854, 5143, 5621, 5992 |
| BsmI | GAATGC | 1 cut(s) | 6277 |
| Bso31I | GGTCTC | 3 cut(s) | 33, 587, 2603 |
| BsoBI | CYCGRG | 2 cut(s) | 36, 2582 |
| Bsp119I | TTCGAA | 2 cut(s) | 1692, 2254 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1124, 2495, 2583, 5072, 6981 |
| Bsp13I | TCCGGA | 3 cut(s) | 587, 4082, 6412 |
| Bsp1407I | TGTACA | 4 cut(s) | 1141, 2276, 5015, 5668 |
| Bsp19I | CCATGG | 2 cut(s) | 2626, 6359 |
| BspDI | ATCGAT | 1 cut(s) | 3792 |
| BspEI | TCCGGA | 3 cut(s) | 587, 4082, 6412 |
| BspFNI | CGCG | 1 cut(s) | 4510 |
| BspHI | TCATGA | 3 cut(s) | 1297, 5074, 5986 |
| BspMAI | CTGCAG | 7 cut(s) | 2420, 2766, 3425, 3813, 4636, 4787, 6206 |
| BspMI | ACCTGC | 2 cut(s) | 1650, 4790 |
| BspT104I | TTCGAA | 2 cut(s) | 1692, 2254 |
| BspT107I | GGYRCC | 5 cut(s) | 3568, 5312, 6872, 6894, 6976 |
| BspTI | CTTAAG | 2 cut(s) | 1777, 3122 |
| BspTNI | GGTCTC | 3 cut(s) | 33, 587, 2603 |
| BsrBI | CCGCTC | 2 cut(s) | 1063, 6486 |
| BsrDI | GCAATG | 7 cut(s) | 1452, 4197, 4699, 4852, 5625, 6694, 6855 |
| BsrFI | RCCGGY | 3 cut(s) | 5315, 6246, 6973 |
| BsrGI | TGTACA | 4 cut(s) | 1141, 2276, 5015, 5668 |
| BssAI | RCCGGY | 3 cut(s) | 5315, 6246, 6973 |
| BssNAI | GTATAC | 1 cut(s) | 3917 |
| BssNI | GRCGYC | 3 cut(s) | 3181, 5132, 5891 |
| BssSI | CACGAG | 1 cut(s) | 5936 |
| BssT1I | CCWWGG | 4 cut(s) | 2626, 2701, 6039, 6359 |
| Bst1107I | GTATAC | 1 cut(s) | 3917 |
| Bst2BI | CACGAG | 1 cut(s) | 5936 |
| BstACI | GRCGYC | 3 cut(s) | 3181, 5132, 5891 |
| BstAFI | CTTAAG | 2 cut(s) | 1777, 3122 |
| BstAUI | TGTACA | 4 cut(s) | 1141, 2276, 5015, 5668 |
| BstBAI | YACGTR | 3 cut(s) | 2915, 3488, 5165 |
| BstBI | TTCGAA | 2 cut(s) | 1692, 2254 |
| BstC8I | GCNNGC | 5 cut(s) | 1061, 1684, 1784, 3632, 5317 |
| BstDSI | CCRYGG | 3 cut(s) | 2626, 6359, 6812 |
| BstEII | GGTNACC | 2 cut(s) | 4736, 6127 |
| BstFNI | CGCG | 1 cut(s) | 4510 |
| BstH2I | RGCGCY | 3 cut(s) | 1253, 5211, 6820 |
| BstHHI | GCGC | 4 cut(s) | 1252, 2210, 5210, 6819 |
| BstMCI | CGRYCG | 2 cut(s) | 3796, 6974 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 2827, 3604, 4516, 5390, 6207, 6391, 6572 |
| BstNSI | RCATGY | 7 cut(s) | 599, 1461, 1880, 4022, 5159, 5336, 5505 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 5994 |
| BstPI | GGTNACC | 2 cut(s) | 4736, 6127 |
| BstSLI | GKGCMC | 2 cut(s) | 2583, 6981 |
| BstUI | CGCG | 1 cut(s) | 4510 |
| BstV2I | GAAGAC | 5 cut(s) | 166, 2426, 4173, 5292, 5886 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 6819 |
| BstZ17I | GTATAC | 1 cut(s) | 3917 |
| Bsu15I | ATCGAT | 1 cut(s) | 3792 |
| BsuI | GTATCC | 1 cut(s) | 3502 |
| BsuTUI | ATCGAT | 1 cut(s) | 3792 |
| BtgI | CCRYGG | 3 cut(s) | 2626, 6359, 6812 |
| BtgZI | GCGATG | 1 cut(s) | 913 |
| BtrI | CACGTC | 2 cut(s) | 4147, 4853 |
| BtsI | GCAGTG | 1 cut(s) | 2759 |
| BtsIMutI | CAGTG | 9 cut(s) | 659, 955, 1399, 2759, 4950, 5865, 6081, 6169, 6222 |
| BveI | ACCTGC | 2 cut(s) | 1650, 4790 |
| Cac8I | GCNNGC | 5 cut(s) | 1061, 1684, 1784, 3632, 5317 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2182, 2770, 4733 |
| CciI | TCATGA | 3 cut(s) | 1297, 5074, 5986 |
| CfoI | GCGC | 4 cut(s) | 1252, 2210, 5210, 6819 |
| Cfr10I | RCCGGY | 3 cut(s) | 5315, 6246, 6973 |
| ClaI | ATCGAT | 1 cut(s) | 3792 |
| CpoI | CGGWCCG | 1 cut(s) | 4204 |
| CseI | GACGC | 8 cut(s) | 87, 263, 3170, 3391, 4598, 4851, 5984, 6224 |
| CsiI | ACCWGGT | 1 cut(s) | 6875 |
| CspAI | ACCGGT | 1 cut(s) | 6973 |
| CspI | CGGWCCG | 1 cut(s) | 4204 |
| DraI | TTTAAA | 1 cut(s) | 4587 |
| DraIII | CACNNNGTG | 1 cut(s) | 6879 |
| EaeI | YGGCCR | 2 cut(s) | 6505, 6888 |
| EciI | GGCGGA | 1 cut(s) | 2952 |
| Eco130I | CCWWGG | 4 cut(s) | 2626, 2701, 6039, 6359 |
| Eco147I | AGGCCT | 1 cut(s) | 2391 |
| Eco24I | GRGCYC | 1 cut(s) | 1124 |
| Eco31I | GGTCTC | 3 cut(s) | 33, 587, 2603 |
| Eco32I | GATATC | 3 cut(s) | 2463, 2960, 3718 |
| Eco47I | GGWCC | 5 cut(s) | 4204, 4433, 5242, 5554, 6291 |
| Eco47III | AGCGCT | 1 cut(s) | 1251 |
| Eco57I | CTGAAG | 7 cut(s) | 1871, 2077, 3761, 5545, 5678, 6105, 6728 |
| Eco72I | CACGTG | 2 cut(s) | 3488, 5165 |
| Eco88I | CYCGRG | 2 cut(s) | 36, 2582 |
| Eco91I | GGTNACC | 2 cut(s) | 4736, 6127 |
| EcoO109I | RGGNCCY | 1 cut(s) | 5242 |
| EcoO65I | GGTNACC | 2 cut(s) | 4736, 6127 |
| EcoRI | GAATTC | 4 cut(s) | 1979, 4257, 6450, 6788 |
| EcoRV | GATATC | 3 cut(s) | 2463, 2960, 3718 |
| EcoT14I | CCWWGG | 4 cut(s) | 2626, 2701, 6039, 6359 |
| EcoT22I | ATGCAT | 1 cut(s) | 1593 |
| EcoT38I | GRGCYC | 1 cut(s) | 1124 |
| ErhI | CCWWGG | 4 cut(s) | 2626, 2701, 6039, 6359 |
| Esp3I | CGTCTC | 3 cut(s) | 3188, 3374, 6242 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3696, 3728 |
| FaqI | GGGAC | 8 cut(s) | 438, 3364, 4133, 4350, 4854, 5143, 5621, 5992 |
| FauI | CCCGC | 5 cut(s) | 209, 1068, 4908, 5302, 6221 |
| FbaI | TGATCA | 2 cut(s) | 4132, 4969 |
| FblI | GTMKAC | 3 cut(s) | 1093, 3916, 6618 |
| FriOI | GRGCYC | 1 cut(s) | 1124 |
| FspI | TGCGCA | 1 cut(s) | 2209 |
| GlaI | GCGC | 4 cut(s) | 1251, 2209, 5209, 6818 |
| GsaI | CCCAGC | 2 cut(s) | 4482, 6517 |
| GsuI | CTGGAG | 8 cut(s) | 758, 1074, 2159, 4869, 5463, 5495, 5569, 6789 |
| HaeII | RGCGCY | 3 cut(s) | 1253, 5211, 6820 |
| HgaI | GACGC | 8 cut(s) | 87, 263, 3170, 3391, 4598, 4851, 5984, 6224 |
| HhaI | GCGC | 4 cut(s) | 1252, 2210, 5210, 6819 |
| Hin1I | GRCGYC | 3 cut(s) | 3181, 5132, 5891 |
| Hin6I | GCGC | 4 cut(s) | 1250, 2208, 5208, 6817 |
| HinP1I | GCGC | 4 cut(s) | 1250, 2208, 5208, 6817 |
| HincII | GTYRAC | 4 cut(s) | 750, 1094, 6326, 6619 |
| HindII | GTYRAC | 4 cut(s) | 750, 1094, 6326, 6619 |
| HindIII | AAGCTT | 5 cut(s) | 275, 561, 1188, 1780, 3596 |
| Hpy99I | CGWCG | 5 cut(s) | 79, 257, 1632, 3577, 6623 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 2827, 3604, 4516, 5390, 6207, 6391, 6572 |
| Hsp92I | GRCGYC | 3 cut(s) | 3181, 5132, 5891 |
| HspAI | GCGC | 4 cut(s) | 1250, 2208, 5208, 6817 |
| Kpn2I | TCCGGA | 3 cut(s) | 587, 4082, 6412 |
| KpnI | GGTACC | 2 cut(s) | 3572, 6898 |
| KroI | GCCGGC | 1 cut(s) | 5315 |
| KroNI | GCCGGC | 1 cut(s) | 5317 |
| Ksp22I | TGATCA | 2 cut(s) | 4132, 4969 |
| MabI | ACCWGGT | 1 cut(s) | 6875 |
| MbiI | CCGCTC | 2 cut(s) | 1063, 6486 |
| MfeI | CAATTG | 6 cut(s) | 2163, 3174, 3386, 3815, 5407, 5478 |
| MhlI | GDGCHC | 5 cut(s) | 1124, 2495, 2583, 5072, 6981 |
| MlsI | TGGCCA | 1 cut(s) | 6890 |
| MluNI | TGGCCA | 1 cut(s) | 6890 |
| MmeI | TCCRAC | 6 cut(s) | 679, 2085, 2930, 4939, 4963, 6023 |
| Mox20I | TGGCCA | 1 cut(s) | 6890 |
| Mph1103I | ATGCAT | 1 cut(s) | 1593 |
| MroI | TCCGGA | 3 cut(s) | 587, 4082, 6412 |
| MroNI | GCCGGC | 1 cut(s) | 5315 |
| MroXI | GAANNNNTTC | 9 cut(s) | 276, 435, 627, 1191, 1214, 2223, 2292, 3303, 4862 |
| MscI | TGGCCA | 1 cut(s) | 6890 |
| MslI | CAYNNNNRTG | 8 cut(s) | 1485, 3345, 4023, 4033, 4425, 5079, 5716, 5940 |
| Msp20I | TGGCCA | 1 cut(s) | 6890 |
| MspA1I | CMGCKG | 2 cut(s) | 1198, 3566 |
| MspCI | CTTAAG | 2 cut(s) | 1777, 3122 |
| MunI | CAATTG | 6 cut(s) | 2163, 3174, 3386, 3815, 5407, 5478 |
| Mva1269I | GAATGC | 1 cut(s) | 6277 |
| MvnI | CGCG | 1 cut(s) | 4510 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 2827, 3604, 4516, 5390, 6207, 6391, 6572 |
| NaeI | GCCGGC | 1 cut(s) | 5317 |
| NciI | CCSGG | 3 cut(s) | 1647, 5379, 6456 |
| NcoI | CCATGG | 2 cut(s) | 2626, 6359 |
| NgoMIV | GCCGGC | 1 cut(s) | 5315 |
| NmuCI | GTSAC | 6 cut(s) | 598, 2747, 3772, 4736, 6026, 6908 |
| NsbI | TGCGCA | 1 cut(s) | 2209 |
| NsiI | ATGCAT | 1 cut(s) | 1593 |
| NspI | RCATGY | 7 cut(s) | 599, 1461, 1880, 4022, 5159, 5336, 5505 |
| NspV | TTCGAA | 2 cut(s) | 1692, 2254 |
| PaeR7I | CTCGAG | 1 cut(s) | 36 |
| PagI | TCATGA | 3 cut(s) | 1297, 5074, 5986 |
| PceI | AGGCCT | 1 cut(s) | 2391 |
| PciI | ACATGT | 2 cut(s) | 5155, 5332 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 1011, 4849, 5888 |
| PctI | GAATGC | 1 cut(s) | 6277 |
| PdiI | GCCGGC | 1 cut(s) | 5317 |
| PdmI | GAANNNNTTC | 9 cut(s) | 276, 435, 627, 1191, 1214, 2223, 2292, 3303, 4862 |
| PflMI | CCANNNNNTGG | 5 cut(s) | 2165, 2182, 2383, 3176, 4269 |
| PinAI | ACCGGT | 1 cut(s) | 6973 |
| Ple19I | CGATCG | 1 cut(s) | 3796 |
| PmaCI | CACGTG | 2 cut(s) | 3488, 5165 |
| PmlI | CACGTG | 2 cut(s) | 3488, 5165 |
| Ppu21I | YACGTR | 3 cut(s) | 2915, 3488, 5165 |
| PpuMI | RGGWCCY | 1 cut(s) | 5242 |
| PscI | ACATGT | 2 cut(s) | 5155, 5332 |
| PshAI | GACNNNNGTC | 1 cut(s) | 5994 |
| PsiI | TTATAA | 2 cut(s) | 1103, 1860 |
| Psp5II | RGGWCCY | 1 cut(s) | 5242 |
| PspCI | CACGTG | 2 cut(s) | 3488, 5165 |
| PspEI | GGTNACC | 2 cut(s) | 4736, 6127 |
| PspFI | CCCAGC | 2 cut(s) | 4478, 6513 |
| PspPPI | RGGWCCY | 1 cut(s) | 5242 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 5151, 5183 |
| PstI | CTGCAG | 7 cut(s) | 2420, 2766, 3425, 3813, 4636, 4787, 6206 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2182, 2770, 4733 |
| PvuI | CGATCG | 1 cut(s) | 3796 |
| PvuII | CAGCTG | 1 cut(s) | 1198 |
| RseI | CAYNNNNRTG | 8 cut(s) | 1485, 3345, 4023, 4033, 4425, 5079, 5716, 5940 |
| Rsr2I | CGGWCCG | 1 cut(s) | 4204 |
| RsrII | CGGWCCG | 1 cut(s) | 4204 |
| SalI | GTCGAC | 2 cut(s) | 1092, 6617 |
| ScaI | AGTACT | 2 cut(s) | 3083, 5440 |
| SduI | GDGCHC | 5 cut(s) | 1124, 2495, 2583, 5072, 6981 |
| SexAI | ACCWGGT | 1 cut(s) | 6875 |
| Sfr274I | CTCGAG | 1 cut(s) | 36 |
| SfuI | TTCGAA | 2 cut(s) | 1692, 2254 |
| SinI | GGWCC | 5 cut(s) | 4204, 4433, 5242, 5554, 6291 |
| SlaI | CTCGAG | 1 cut(s) | 36 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 1485, 3345, 4023, 4033, 4425, 5079, 5716, 5940 |
| SseBI | AGGCCT | 1 cut(s) | 2391 |
| SspI | AATATT | 4 cut(s) | 1075, 1443, 2072, 5830 |
| StuI | AGGCCT | 1 cut(s) | 2391 |
| StyI | CCWWGG | 4 cut(s) | 2626, 2701, 6039, 6359 |
| TaqII | GACCGA | 1 cut(s) | 4221 |
| TauI | GCSGC | 5 cut(s) | 855, 2001, 2415, 5488, 6486 |
| TscAI | CASTG | 9 cut(s) | 666, 955, 1399, 2766, 4957, 5865, 6088, 6169, 6222 |
| TseFI | GTSAC | 6 cut(s) | 598, 2747, 3772, 4736, 6026, 6908 |
| Tsp45I | GTSAC | 6 cut(s) | 598, 2747, 3772, 4736, 6026, 6908 |
| TspGWI | ACGGA | 7 cut(s) | 667, 821, 1475, 3700, 5115, 6170, 7019 |
| TspRI | CASTG | 9 cut(s) | 666, 955, 1399, 2766, 4957, 5865, 6088, 6169, 6222 |
| Van91I | CCANNNNNTGG | 5 cut(s) | 2165, 2182, 2383, 3176, 4269 |
| Vha464I | CTTAAG | 2 cut(s) | 1777, 3122 |
| VpaK11BI | GGWCC | 5 cut(s) | 4204, 4433, 5242, 5554, 6291 |
| XbaI | TCTAGA | 3 cut(s) | 1322, 1936, 2215 |
| XceI | RCATGY | 7 cut(s) | 599, 1461, 1880, 4022, 5159, 5336, 5505 |
| XcmI | CCANNNNNNNNNTGG | 6 cut(s) | 156, 2633, 3586, 5593, 6883, 6898 |
| XhoI | CTCGAG | 1 cut(s) | 36 |
| XmaJI | CCTAGG | 1 cut(s) | 2701 |
| XmiI | GTMKAC | 3 cut(s) | 1093, 3916, 6618 |
| XmnI | GAANNNNTTC | 9 cut(s) | 276, 435, 627, 1191, 1214, 2223, 2292, 3303, 4862 |
| ZraI | GACGTC | 2 cut(s) | 5133, 5892 |
| ZrmI | AGTACT | 2 cut(s) | 3083, 5440 |
| Zsp2I | ATGCAT | 1 cut(s) | 1593 |