histone serine kinase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 73 - 130 | 2.5e-12 | TIR domain |
| TIR | PF01582 | 130 - 186 | 9.1e-06 | TIR domain |
| NB-ARC | PF00931 | 217 - 367 | 8.8e-18 | NB-ARC domain |
| NACHT | PF05729 | 220 - 362 | 6.1e-06 | NACHT domain |
| WHD_ROQ1 | PF23282 | 436 - 505 | 2e-18 | Disease resistance protein Roq1-like, winged-helix domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 980 |
| Acc65I | GGTACC | 2 cut(s) | 2466, 2604 |
| AccB1I | GGYRCC | 3 cut(s) | 2466, 2604, 2909 |
| AccI | GTMKAC | 3 cut(s) | 822, 970, 2483 |
| AciI | CCGC | 9 cut(s) | 153, 256, 611, 1792, 1919, 1986, 2344, 2706, 3551 |
| AcoI | YGGCCR | 4 cut(s) | 936, 2707, 3291, 3552 |
| AcsI | RAATTY | 3 cut(s) | 916, 3544, 3612 |
| AcuI | CTGAAG | 3 cut(s) | 1326, 1966, 2066 |
| AcvI | CACGTG | 1 cut(s) | 2600 |
| AfaI | GTAC | 6 cut(s) | 39, 924, 1230, 2468, 2606, 3077 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 575, 2870, 3547 |
| AflII | CTTAAG | 2 cut(s) | 14, 1657 |
| AflIII | ACRYGT | 1 cut(s) | 598 |
| AhlI | ACTAGT | 1 cut(s) | 2536 |
| AjnI | CCWGG | 5 cut(s) | 851, 925, 961, 2433, 2469 |
| AleI | CACNNNNGTG | 1 cut(s) | 3010 |
| Alw26I | GTCTC | 3 cut(s) | 1437, 1997, 3192 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1078, 1858 |
| Ama87I | CYCGRG | 1 cut(s) | 1527 |
| AoxI | GGCC | 6 cut(s) | 200, 936, 1159, 2707, 3291, 3552 |
| ApeKI | GCWGC | 4 cut(s) | 1858, 1884, 2630, 3619 |
| ApoI | RAATTY | 3 cut(s) | 916, 3544, 3612 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 330, 1091 |
| Asp718I | GGTACC | 2 cut(s) | 2466, 2604 |
| AspLEI | GCGC | 1 cut(s) | 2977 |
| AspS9I | GGNCC | 3 cut(s) | 849, 959, 1990 |
| AsuC2I | CCSGG | 2 cut(s) | 1976, 2093 |
| AsuHPI | GGTGA | 5 cut(s) | 257, 953, 1514, 1963, 2228 |
| AsuII | TTCGAA | 1 cut(s) | 334 |
| AvaI | CYCGRG | 1 cut(s) | 1527 |
| AvaII | GGWCC | 3 cut(s) | 849, 959, 1990 |
| BaeGI | GKGCMC | 1 cut(s) | 1767 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2588, 2596, 2621, 2629 |
| BamHI | GGATCC | 3 cut(s) | 123, 2389, 2699 |
| BanI | GGYRCC | 3 cut(s) | 2466, 2604, 2909 |
| BanII | GRGCYC | 1 cut(s) | 2315 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2088, 2120 |
| BauI | CACGAG | 1 cut(s) | 3377 |
| BbrPI | CACGTG | 1 cut(s) | 2600 |
| BbsI | GAAGAC | 2 cut(s) | 201, 220 |
| BbvCI | CCTCAGC | 1 cut(s) | 2234 |
| BbvI | GCAGC | 4 cut(s) | 1845, 1871, 2642, 3631 |
| BciT130I | CCWGG | 5 cut(s) | 853, 927, 963, 2435, 2471 |
| BciVI | GTATCC | 2 cut(s) | 313, 2867 |
| BclI | TGATCA | 2 cut(s) | 2158, 3237 |
| BcnI | CCSGG | 2 cut(s) | 1976, 2093 |
| BcoDI | GTCTC | 3 cut(s) | 1437, 1997, 3192 |
| BcuI | ACTAGT | 1 cut(s) | 2536 |
| BfmI | CTRYAG | 3 cut(s) | 2025, 3171, 3683 |
| BfoI | RGCGCY | 1 cut(s) | 2978 |
| BfrI | CTTAAG | 2 cut(s) | 14, 1657 |
| BfuI | GTATCC | 2 cut(s) | 313, 2867 |
| BglII | AGATCT | 1 cut(s) | 1317 |
| BisI | GCNGC | 7 cut(s) | 1793, 1859, 1885, 2631, 2707, 3552, 3620 |
| BlsI | GCNGC | 7 cut(s) | 1794, 1860, 1886, 2632, 2708, 3553, 3621 |
| Bme1390I | CCNGG | 7 cut(s) | 853, 927, 963, 1976, 2093, 2435, 2471 |
| Bme18I | GGWCC | 3 cut(s) | 849, 959, 1990 |
| BmeT110I | CYCGRG | 1 cut(s) | 1527 |
| BmgT120I | GGNCC | 3 cut(s) | 849, 959, 1990 |
| BmrFI | CCNGG | 7 cut(s) | 853, 927, 963, 1976, 2093, 2435, 2471 |
| BmrI | ACTGGG | 1 cut(s) | 3600 |
| BmsI | GCATC | 4 cut(s) | 1455, 1591, 2209, 3633 |
| BmuI | ACTGGG | 1 cut(s) | 3600 |
| BpiI | GAAGAC | 2 cut(s) | 201, 220 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2030, 2062, 2267, 2299 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2234 |
| Bpu14I | TTCGAA | 1 cut(s) | 334 |
| BpuEI | CTTGAG | 3 cut(s) | 1853, 2021, 3223 |
| BpuMI | CCSGG | 2 cut(s) | 1976, 2093 |
| BsaAI | YACGTR | 2 cut(s) | 820, 2600 |
| BsaBI | GATNNNNATC | 2 cut(s) | 763, 1248 |
| BsaJI | CCNNGG | 4 cut(s) | 962, 1113, 1974, 2608 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 33, 2378, 2408, 3094, 3124 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 575, 2870, 3547 |
| Bse118I | RCCGGY | 1 cut(s) | 938 |
| Bse1I | ACTGG | 7 cut(s) | 1236, 2067, 2984, 3001, 3030, 3277, 3595 |
| Bse3DI | GCAATG | 5 cut(s) | 348, 757, 1329, 1747, 3072 |
| Bse8I | GATNNNNATC | 2 cut(s) | 763, 1248 |
| BseBI | CCWGG | 5 cut(s) | 853, 927, 963, 2435, 2471 |
| BseDI | CCNNGG | 4 cut(s) | 962, 1113, 1974, 2608 |
| BseJI | GATNNNNATC | 2 cut(s) | 763, 1248 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 575, 2870, 3547 |
| BseMI | GCAATG | 5 cut(s) | 348, 757, 1329, 1747, 3072 |
| BseMII | CTCAG | 7 cut(s) | 247, 1712, 2225, 2274, 2718, 2775, 3563 |
| BseNI | ACTGG | 7 cut(s) | 1236, 2067, 2984, 3001, 3030, 3277, 3595 |
| BseRI | GAGGAG | 4 cut(s) | 11, 84, 2539, 3117 |
| BseSI | GKGCMC | 1 cut(s) | 1767 |
| BseX3I | CGGCCG | 3 cut(s) | 936, 2707, 3552 |
| BseXI | GCAGC | 4 cut(s) | 1845, 1871, 2642, 3631 |
| BseYI | CCCAGC | 1 cut(s) | 2308 |
| Bsh1285I | CGRYCG | 3 cut(s) | 939, 2710, 3555 |
| BshFI | GGCC | 6 cut(s) | 202, 938, 1161, 2709, 3293, 3554 |
| BshNI | GGYRCC | 3 cut(s) | 2466, 2604, 2909 |
| BsiEI | CGRYCG | 3 cut(s) | 939, 2710, 3555 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1527 |
| BsiSI | CCGG | 9 cut(s) | 939, 1976, 2093, 2316, 2448, 2697, 2703, 3510, 3530 |
| BslFI | GGGAC | 2 cut(s) | 1976, 3214 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 575, 2870, 3547 |
| BsmAI | GTCTC | 3 cut(s) | 1437, 1997, 3192 |
| BsmFI | GGGAC | 2 cut(s) | 1976, 3214 |
| BsnI | GGCC | 6 cut(s) | 202, 938, 1161, 2709, 3293, 3554 |
| BsoBI | CYCGRG | 1 cut(s) | 1527 |
| Bsp119I | TTCGAA | 1 cut(s) | 334 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1767, 2315 |
| Bsp19I | CCATGG | 2 cut(s) | 1113, 2608 |
| BspACI | CCGC | 9 cut(s) | 153, 256, 611, 1792, 1919, 1986, 2344, 2706, 3551 |
| BspANI | GGCC | 6 cut(s) | 202, 938, 1161, 2709, 3293, 3554 |
| BspCNI | CTCAG | 7 cut(s) | 246, 1713, 2226, 2273, 2719, 2776, 3564 |
| BspHI | TCATGA | 2 cut(s) | 1174, 2824 |
| BspQI | GCTCTTC | 1 cut(s) | 2747 |
| BspT104I | TTCGAA | 1 cut(s) | 334 |
| BspT107I | GGYRCC | 3 cut(s) | 2466, 2604, 2909 |
| BspTI | CTTAAG | 2 cut(s) | 14, 1657 |
| BsrDI | GCAATG | 5 cut(s) | 348, 757, 1329, 1747, 3072 |
| BsrFI | RCCGGY | 1 cut(s) | 938 |
| BsrI | ACTGG | 7 cut(s) | 1236, 2067, 2984, 3001, 3030, 3277, 3595 |
| BssAI | RCCGGY | 1 cut(s) | 938 |
| BssECI | CCNNGG | 4 cut(s) | 962, 1113, 1974, 2608 |
| BssSI | CACGAG | 1 cut(s) | 3377 |
| BssT1I | CCWWGG | 2 cut(s) | 1113, 2608 |
| Bst2BI | CACGAG | 1 cut(s) | 3377 |
| Bst2UI | CCWGG | 5 cut(s) | 853, 927, 963, 2435, 2471 |
| Bst4CI | ACNGT | 8 cut(s) | 827, 1639, 2255, 2456, 2648, 2888, 3298, 3367 |
| Bst6I | CTCTTC | 5 cut(s) | 69, 939, 2062, 2268, 2747 |
| BstAFI | CTTAAG | 2 cut(s) | 14, 1657 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1762 |
| BstBAI | YACGTR | 2 cut(s) | 820, 2600 |
| BstBI | TTCGAA | 1 cut(s) | 334 |
| BstC8I | GCNNGC | 5 cut(s) | 450, 1541, 1664, 2295, 2818 |
| BstDEI | CTNAG | 9 cut(s) | 233, 1478, 1721, 2234, 2260, 2340, 2727, 2784, 3572 |
| BstDSI | CCRYGG | 2 cut(s) | 1113, 2608 |
| BstEII | GGTNACC | 1 cut(s) | 3335 |
| BstH2I | RGCGCY | 1 cut(s) | 2978 |
| BstHHI | GCGC | 1 cut(s) | 2977 |
| BstMAI | GTCTC | 3 cut(s) | 1437, 1997, 3192 |
| BstMCI | CGRYCG | 3 cut(s) | 939, 2710, 3555 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 747, 1762, 1927, 2219, 2780 |
| BstNI | CCWGG | 5 cut(s) | 853, 927, 963, 2435, 2471 |
| BstNSI | RCATGY | 2 cut(s) | 488, 3156 |
| BstPI | GGTNACC | 1 cut(s) | 3335 |
| BstSCI | CCNGG | 7 cut(s) | 851, 925, 961, 1974, 2091, 2433, 2469 |
| BstSFI | CTRYAG | 3 cut(s) | 2025, 3171, 3683 |
| BstSLI | GKGCMC | 1 cut(s) | 1767 |
| BstSNI | TACGTA | 1 cut(s) | 820 |
| BstV1I | GCAGC | 4 cut(s) | 1845, 1871, 2642, 3631 |
| BstV2I | GAAGAC | 2 cut(s) | 201, 220 |
| BstX2I | RGATCY | 8 cut(s) | 123, 534, 625, 1249, 1317, 1942, 2389, 2699 |
| BstYI | RGATCY | 8 cut(s) | 123, 534, 625, 1249, 1317, 1942, 2389, 2699 |
| BstZI | CGGCCG | 3 cut(s) | 936, 2707, 3552 |
| BsuI | GTATCC | 2 cut(s) | 313, 2867 |
| BsuRI | GGCC | 6 cut(s) | 202, 938, 1161, 2709, 3293, 3554 |
| BtgI | CCRYGG | 2 cut(s) | 1113, 2608 |
| BtsI | GCAGTG | 2 cut(s) | 2373, 3414 |
| BtsIMutI | CAGTG | 6 cut(s) | 832, 2373, 2994, 3284, 3303, 3414 |
| Cac8I | GCNNGC | 5 cut(s) | 450, 1541, 1664, 2295, 2818 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1078, 1858 |
| CciI | TCATGA | 2 cut(s) | 1174, 2824 |
| CfoI | GCGC | 1 cut(s) | 2977 |
| Cfr10I | RCCGGY | 1 cut(s) | 938 |
| Cfr13I | GGNCC | 3 cut(s) | 849, 959, 1990 |
| CsiI | ACCWGGT | 1 cut(s) | 851 |
| Csp6I | GTAC | 6 cut(s) | 38, 923, 1229, 2467, 2605, 3076 |
| CviQI | GTAC | 6 cut(s) | 38, 923, 1229, 2467, 2605, 3076 |
| DdeI | CTNAG | 9 cut(s) | 233, 1478, 1721, 2234, 2260, 2340, 2727, 2784, 3572 |
| DraI | TTTAAA | 1 cut(s) | 456 |
| EaeI | YGGCCR | 4 cut(s) | 936, 2707, 3291, 3552 |
| EagI | CGGCCG | 3 cut(s) | 936, 2707, 3552 |
| Eam1104I | CTCTTC | 5 cut(s) | 69, 939, 2062, 2268, 2747 |
| EarI | CTCTTC | 5 cut(s) | 69, 939, 2062, 2268, 2747 |
| EclXI | CGGCCG | 3 cut(s) | 936, 2707, 3552 |
| Eco105I | TACGTA | 1 cut(s) | 820 |
| Eco130I | CCWWGG | 2 cut(s) | 1113, 2608 |
| Eco24I | GRGCYC | 1 cut(s) | 2315 |
| Eco47I | GGWCC | 3 cut(s) | 849, 959, 1990 |
| Eco52I | CGGCCG | 3 cut(s) | 936, 2707, 3552 |
| Eco57I | CTGAAG | 3 cut(s) | 1326, 1966, 2066 |
| Eco72I | CACGTG | 1 cut(s) | 2600 |
| Eco88I | CYCGRG | 1 cut(s) | 1527 |
| Eco91I | GGTNACC | 1 cut(s) | 3335 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1990 |
| EcoO65I | GGTNACC | 1 cut(s) | 3335 |
| EcoRI | GAATTC | 1 cut(s) | 3544 |
| EcoRII | CCWGG | 5 cut(s) | 851, 925, 961, 2433, 2469 |
| EcoT14I | CCWWGG | 2 cut(s) | 1113, 2608 |
| EcoT22I | ATGCAT | 1 cut(s) | 1470 |
| EcoT38I | GRGCYC | 1 cut(s) | 2315 |
| ErhI | CCWWGG | 2 cut(s) | 1113, 2608 |
| FaqI | GGGAC | 2 cut(s) | 1976, 3214 |
| FauI | CCCGC | 2 cut(s) | 263, 1979 |
| FbaI | TGATCA | 2 cut(s) | 2158, 3237 |
| FblI | GTMKAC | 3 cut(s) | 822, 970, 2483 |
| Fnu4HI | GCNGC | 7 cut(s) | 1793, 1859, 1885, 2631, 2707, 3552, 3620 |
| FriOI | GRGCYC | 1 cut(s) | 2315 |
| Fsp4HI | GCNGC | 7 cut(s) | 1793, 1859, 1885, 2631, 2707, 3552, 3620 |
| GlaI | GCGC | 1 cut(s) | 2976 |
| GluI | GCNGC | 7 cut(s) | 1793, 1859, 1885, 2631, 2707, 3552, 3620 |
| GsaI | CCCAGC | 1 cut(s) | 2312 |
| HaeII | RGCGCY | 1 cut(s) | 2978 |
| HaeIII | GGCC | 6 cut(s) | 202, 938, 1161, 2709, 3293, 3554 |
| HapII | CCGG | 9 cut(s) | 939, 1976, 2093, 2316, 2448, 2697, 2703, 3510, 3530 |
| HhaI | GCGC | 1 cut(s) | 2977 |
| Hin6I | GCGC | 1 cut(s) | 2975 |
| HinP1I | GCGC | 1 cut(s) | 2975 |
| HincII | GTYRAC | 2 cut(s) | 971, 2484 |
| HindII | GTYRAC | 2 cut(s) | 971, 2484 |
| HindIII | AAGCTT | 5 cut(s) | 176, 450, 1065, 1648, 1660 |
| HpaII | CCGG | 9 cut(s) | 939, 1976, 2093, 2316, 2448, 2697, 2703, 3510, 3530 |
| HphI | GGTGA | 5 cut(s) | 257, 953, 1514, 1963, 2228 |
| Hpy99I | CGWCG | 3 cut(s) | 287, 2327, 2485 |
| HpyCH4III | ACNGT | 8 cut(s) | 827, 1639, 2255, 2456, 2648, 2888, 3298, 3367 |
| HpyCH4IV | ACGT | 5 cut(s) | 282, 598, 819, 2137, 2599 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 747, 1762, 1927, 2219, 2780 |
| HpyF3I | CTNAG | 9 cut(s) | 233, 1478, 1721, 2234, 2260, 2340, 2727, 2784, 3572 |
| HpySE526I | ACGT | 5 cut(s) | 282, 598, 819, 2137, 2599 |
| HspAI | GCGC | 1 cut(s) | 2975 |
| KflI | GGGWCCC | 1 cut(s) | 1990 |
| KpnI | GGTACC | 2 cut(s) | 2470, 2608 |
| Ksp22I | TGATCA | 2 cut(s) | 2158, 3237 |
| LguI | GCTCTTC | 1 cut(s) | 2747 |
| LmnI | GCTCC | 5 cut(s) | 24, 185, 2318, 2515, 3102 |
| Lsp1109I | GCAGC | 4 cut(s) | 1845, 1871, 2642, 3631 |
| LweI | GCATC | 4 cut(s) | 1455, 1591, 2209, 3633 |
| MabI | ACCWGGT | 1 cut(s) | 851 |
| MaeII | ACGT | 5 cut(s) | 282, 598, 819, 2137, 2599 |
| MaeIII | GTNAC | 5 cut(s) | 815, 1188, 2255, 2992, 3335 |
| MfeI | CAATTG | 1 cut(s) | 3132 |
| MflI | RGATCY | 8 cut(s) | 123, 534, 625, 1249, 1317, 1942, 2389, 2699 |
| MhlI | GDGCHC | 2 cut(s) | 1767, 2315 |
| MlyI | GAGTC | 7 cut(s) | 623, 806, 966, 976, 2504, 2721, 3310 |
| MmeI | TCCRAC | 1 cut(s) | 1974 |
| Mph1103I | ATGCAT | 1 cut(s) | 1470 |
| MroXI | GAANNNNTTC | 2 cut(s) | 330, 1091 |
| MslI | CAYNNNNRTG | 4 cut(s) | 735, 1197, 1569, 3010 |
| MspA1I | CMGCKG | 3 cut(s) | 1884, 1921, 1986 |
| MspCI | CTTAAG | 2 cut(s) | 14, 1657 |
| MspI | CCGG | 9 cut(s) | 939, 1976, 2093, 2316, 2448, 2697, 2703, 3510, 3530 |
| MspR9I | CCNGG | 7 cut(s) | 853, 927, 963, 1976, 2093, 2435, 2471 |
| MunI | CAATTG | 1 cut(s) | 3132 |
| MvaI | CCWGG | 5 cut(s) | 853, 927, 963, 2435, 2471 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 747, 1762, 1927, 2219, 2780 |
| NciI | CCSGG | 2 cut(s) | 1976, 2093 |
| NcoI | CCATGG | 2 cut(s) | 1113, 2608 |
| NmeAIII | GCCGAG | 2 cut(s) | 2735, 3269 |
| NmuCI | GTSAC | 2 cut(s) | 1188, 2992 |
| NsiI | ATGCAT | 1 cut(s) | 1470 |
| NspI | RCATGY | 2 cut(s) | 488, 3156 |
| NspV | TTCGAA | 1 cut(s) | 334 |
| OliI | CACNNNNGTG | 1 cut(s) | 3010 |
| PagI | TCATGA | 2 cut(s) | 1174, 2824 |
| PciSI | GCTCTTC | 1 cut(s) | 2747 |
| PdmI | GAANNNNTTC | 2 cut(s) | 330, 1091 |
| PflFI | GACNNNGTC | 1 cut(s) | 2479 |
| PkrI | GCNGC | 7 cut(s) | 1794, 1860, 1886, 2632, 2708, 3553, 3621 |
| PleI | GAGTC | 7 cut(s) | 622, 805, 966, 975, 2503, 2720, 3309 |
| PmaCI | CACGTG | 1 cut(s) | 2600 |
| PmlI | CACGTG | 1 cut(s) | 2600 |
| PpsI | GAGTC | 7 cut(s) | 622, 805, 966, 975, 2503, 2720, 3309 |
| Ppu21I | YACGTR | 2 cut(s) | 820, 2600 |
| PpuMI | RGGWCCY | 1 cut(s) | 1990 |
| PsiI | TTATAA | 1 cut(s) | 980 |
| Psp5II | RGGWCCY | 1 cut(s) | 1990 |
| Psp6I | CCWGG | 5 cut(s) | 851, 925, 961, 2433, 2469 |
| PspCI | CACGTG | 1 cut(s) | 2600 |
| PspEI | GGTNACC | 1 cut(s) | 3335 |
| PspFI | CCCAGC | 1 cut(s) | 2308 |
| PspGI | CCWGG | 5 cut(s) | 851, 925, 961, 2433, 2469 |
| PspPI | GGNCC | 3 cut(s) | 849, 959, 1990 |
| PspPPI | RGGWCCY | 1 cut(s) | 1990 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1078, 1858 |
| PsuI | RGATCY | 8 cut(s) | 123, 534, 625, 1249, 1317, 1942, 2389, 2699 |
| PsyI | GACNNNGTC | 1 cut(s) | 2479 |
| PvuII | CAGCTG | 1 cut(s) | 1884 |
| RsaI | GTAC | 6 cut(s) | 39, 924, 1230, 2468, 2606, 3077 |
| RsaNI | GTAC | 6 cut(s) | 38, 923, 1229, 2467, 2605, 3076 |
| RseI | CAYNNNNRTG | 4 cut(s) | 735, 1197, 1569, 3010 |
| SalI | GTCGAC | 2 cut(s) | 969, 2482 |
| SapI | GCTCTTC | 1 cut(s) | 2747 |
| SatI | GCNGC | 7 cut(s) | 1793, 1859, 1885, 2631, 2707, 3552, 3620 |
| Sau96I | GGNCC | 3 cut(s) | 849, 959, 1990 |
| SchI | GAGTC | 7 cut(s) | 623, 806, 966, 976, 2504, 2721, 3310 |
| ScrFI | CCNGG | 7 cut(s) | 853, 927, 963, 1976, 2093, 2435, 2471 |
| SduI | GDGCHC | 2 cut(s) | 1767, 2315 |
| SexAI | ACCWGGT | 1 cut(s) | 851 |
| SfaNI | GCATC | 4 cut(s) | 1455, 1591, 2209, 3633 |
| SfcI | CTRYAG | 3 cut(s) | 2025, 3171, 3683 |
| SfuI | TTCGAA | 1 cut(s) | 334 |
| SinI | GGWCC | 3 cut(s) | 849, 959, 1990 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 735, 1197, 1569, 3010 |
| SmlI | CTYRAG | 5 cut(s) | 14, 1657, 1868, 2000, 3202 |
| SmoI | CTYRAG | 5 cut(s) | 14, 1657, 1868, 2000, 3202 |
| SnaBI | TACGTA | 1 cut(s) | 820 |
| SpeI | ACTAGT | 1 cut(s) | 2536 |
| SsiI | CCGC | 9 cut(s) | 153, 256, 611, 1792, 1919, 1986, 2344, 2706, 3551 |
| SspI | AATATT | 2 cut(s) | 2131, 3526 |
| StyD4I | CCNGG | 7 cut(s) | 851, 925, 961, 1974, 2091, 2433, 2469 |
| StyI | CCWWGG | 2 cut(s) | 1113, 2608 |
| TaaI | ACNGT | 8 cut(s) | 827, 1639, 2255, 2456, 2648, 2888, 3298, 3367 |
| TaiI | ACGT | 5 cut(s) | 285, 601, 822, 2140, 2602 |
| TaqI | TCGA | 6 cut(s) | 67, 334, 970, 1551, 2483, 3473 |
| TaqII | GACCGA | 1 cut(s) | 3134 |
| TatI | WGTACW | 2 cut(s) | 37, 3075 |
| TauI | GCSGC | 3 cut(s) | 1795, 2709, 3554 |
| TscAI | CASTG | 6 cut(s) | 832, 2373, 3001, 3284, 3303, 3414 |
| TseFI | GTSAC | 2 cut(s) | 1188, 2992 |
| TseI | GCWGC | 4 cut(s) | 1858, 1884, 2630, 3619 |
| Tsp45I | GTSAC | 2 cut(s) | 1188, 2992 |
| TspGWI | ACGGA | 5 cut(s) | 1493, 1673, 2382, 2528, 3308 |
| TspRI | CASTG | 6 cut(s) | 832, 2373, 3001, 3284, 3303, 3414 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2479 |
| Vha464I | CTTAAG | 2 cut(s) | 14, 1657 |
| VpaK11BI | GGWCC | 3 cut(s) | 849, 959, 1990 |
| XapI | RAATTY | 3 cut(s) | 916, 3544, 3612 |
| XbaI | TCTAGA | 3 cut(s) | 883, 1324, 1819 |
| XceI | RCATGY | 2 cut(s) | 488, 3156 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2615 |
| XmiI | GTMKAC | 3 cut(s) | 822, 970, 2483 |
| XmnI | GAANNNNTTC | 2 cut(s) | 330, 1091 |
| Zsp2I | ATGCAT | 1 cut(s) | 1470 |