Rmu_ssc0000135.1_g000049

positive regulation of cell-substrate adhesion

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000135.1
Physical Location & Seq
Reverse (-)
240390 .. 246004
5615 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000135.1_g000049.1.cds

Sequence Viewer

Length: 2964 bp
atgaaccttagatacggtacgttttctgtgcagggaacatctgctgttgaaggcttattcttaagcttgggtgaaaaagaagaaatgcgtttgagcaatgacccattcttaactatgaccaaactaagattgctgaagatttataatgtaaattttctgggtgggcattttacatatctctctgacgatttacgttgtctggaatggcacgaatgtcctctaaagtctctgccatctggttttacgccctatcagctggttgaattcaagatgcctaacagctgcattgaacgactgtggaagaaaacgccttctatgagaatgctgacactcatggatctttccaactgccaatatctagtcacgacccctgacttcggtgaggtcccaaatcttgagagattgatccttgaaggttgtaaagagttatccgcggttcacccaacaattagggatctccagcatctgattttattgaatttgaaaggctgtgcaagtctaaagagccttcccccatcaatcagcttgagatctcttcaaacttttattctttcgggatgttcaaaactggagaagtttccggagattgtgggaaacatgcaaactttgtcagaactttatttagatggcaccgctataagggagctgcctgtatcaatccagcttttaacaggccttgttttgctaaatctatgtggctgcaagacccttccgagtcttccaagcgctctttgtagaagtttgacatcactgaaatttctttatctgtcatggtgctctagtttggacaaactgccagaaaacataggctccttggaacacttggaggagcttgatgcatgtcatactgctataagaaaagtgcccgagtccatttcactactcaagaatcttaaactactgtgtttccatggctgctctggatacacgggtctagagatgccaaacaagttctcaggtctaagatgtttgacaacactaaacctaggtggatgtaatctccctgaaggagcaatccccagtgacattggcaatttgttctcactgcagagtctggatttaagtgaaaacaactttttcaccatacctgaaagcatctctcaactttctgagcttacagaaatttttctgtttaggtgtagcaaactacaatcgttgccaaaagatcttccatcaagactaagaactataaatttacgggactgtcctatgctgacagattcttcatataatttgatgagatatccacctcgaaagggtttaagtactatcataagttgtcgaaaaccagaggaggatgagcagttgccaatattgctacctgaactcgatgaggtgtctctttctctgcagttgccaatgctacctgaactccatgagtttcatttgggaaatctggaaaaactcgatctttcctactgccaacacttgaagaagatccctgacttgaatggggttccaaaccttaagaaattgatccttgaaggctgtgaaaaattatcagaggttcacccaacatttgggagtctccaacatctgatttttttgaatatgaaaggatgtgtagatctagagagccttccccgcttcatctgcatgaaatatcttgaaatctgtattctttcaggatgttcaaagcttaaagagtttccggagattaatggagatatggataaattgtcacaactgcatttagatgggacggctttagagaatctgccgataccaatgcagcatttgaaatgccctattgtgataaatctaagaggttgcaagaacctattgactattccagtccttttgagtctgaaagctctcaatctgtcaggctgctctcgtatatccggatttccaaataacttgggaagcatggcacatttggaggagcttgatgcctctgaaactgctataacacgagtaccccagtccatttcatttatggagaagcttaaagtgttgtctttctgtggatgtaaaggtttgcagttgcctaaccggttctcgcaattaagctttttgacatctttaaatctacggaggtgtggtctagcagaaataacagtccttactagcctctgtggcttatcctcactgcaaaagttggatttgagtggaaacaaatttgtgagtatacctagtgaaattagtcacttatcctctttgaagcgattgaatttgagtaggaacgacttggtgagtgtaccagatgcaattggtggcttatcctctttgcaacaattgaatttgagtatgaacgacttagtgagtataccagatgcaattgatcgactttcctctttgcagcaattggatttgagtactaacgacttggtgagtataccagatgcaattggtggcttatcctccttgcagcgattgaatttgagtacgaacgacttggtgagtataccagatgcaattggtcgactttcctctttgcagcaattggatttgagtatgaacgacttggtgagtataccagatgcaactggtggcttatcctctttgcagcgattggatttgagtatgaacgacttggtgagaataccagatgcaactggtggcttatcctctttgcagcgattgaatttgagtacgaacgacttggtgagtataccagatgcaattggtcgactatcctctttgcagcgattggatttgagtatgaacgacttggtgagaataccagatgcaactggtggcttatcctctttgcagcgattgaatttgagtacgaacgacttggtgagtataccagatgcaattggtcgactatcctctttgcagcgattggatttgagtgcaaacgacttggtgagtataccagatgcaattggtcgactctcctcgttggagcgattggatttgagtaggaacaagctggtgagcataccagatgcaatcggtctcttaacatccttgaagcatttagattggagtgaaaacaactcagtgagtaactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

987

Amino Acids

108.79

Weight (kDa)

5.7

Isoelectric Point (pI)

38.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000307)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g16600 FvH4_1g16610 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16621 FvH4_1g16630 FvH4_1g16640 FvH4_1g16640 FvH4_1g16650 FvH4_1g16650 FvH4_3g27631 FvH4_4g11392 FvH4_4g11542
prunus_persica Prupe.4G224500_v2.0.a1 Prupe.4G226900_v2.0.a1 Prupe.4G227000_v2.0.a1
pyrus_communis pycom11g18180 pycom11g18210 pycom11g18230 pycom11g18270 pycom11g18350 pycom11g18360 pycom11g18370
rosa_chinensis RchiOBHm_Chr2g0106511 RchiOBHm_Chr2g0106541 RchiOBHm_Chr2g0106551 RchiOBHm_Chr2g0106571 RchiOBHm_Chr2g0124621 RchiOBHm_Chr6g0251591 RchiOBHm_Chr6g0251631 RchiOBHm_Chr6g0251641
rosa_laevigata RLG00000015443 RLG00000015444 RLG00000015458 RLG00000017510 RLG00000017511 RLG00000017512 RLG00000017515 RLG00000017516 RLG00000017517 RLG00000018809 RLG00000020934 RLG00000020935 RLG00000034092
rosa_multiflora Rmu_co8285777.1_g000001 Rmu_sc0000762.1_g000001 Rmu_sc0001872.1_g000006 Rmu_sc0005255.1_g000019 Rmu_sc0005597.1_g000006 Rmu_sc0012104.1_g000001 Rmu_sc0017105.1_g000011 Rmu_sc0022904.1_g000001 Rmu_ssc0000135.1_g000049 Rmu_ssc0000213.1_g000047
rosa_roxburghii Rroxscaffold_2G00092830 Rroxscaffold_2G00119790 Rroxscaffold_2G00137010 Rroxscaffold_2G00137030 Rroxscaffold_2G00137070 Rroxscaffold_7G00216560
rosa_rugosa Rorug02G0136100 Rorug02G0136200 Rorug02G0136300 Rorug02G0136400 Rorug02G0251800 Rorug02G0251800 Rorug02G0455500 Rorug02G0455600 Rorug02G0455700 Rorug05G0195300
rosa_samantha Rh2AG187400 Rh2AG187500 Rh2AG187600 Rh2AG310500 Rh2BG198200 Rh2BG198300 Rh2BG198400 Rh2BG198600 Rh2BG318900 Rh2BG534300 Rh2CG192400 Rh2CG192500 Rh2CG192600 Rh2CG297500 Rh2DG193500 Rh2DG193600 Rh2DG193800 Rh2DG334200 Rh2DG543100 Rh5AG280400 Rh5BG285800 Rh5BG285900 Rh5CG317900 Rh5CG318000 Rh5DG294600 Rh5DG294700 Rh6AG012200 Rh6AG012700 Rh6BG011200 Rh6BG011700
rosa_wichuraiana Rw0G009380 Rw2G014610 Rw2G014630 Rw2G014640 Rw2G014680 Rw2G025120 Rw2G043000 Rw5G026490 Rw6G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 144
AccB1I GGYRCC 1 cut(s) 629
AccB7I CCANNNNNTGG 1 cut(s) 1520
AccII CGCG 1 cut(s) 434
AccIII TCCGGA 3 cut(s) 580, 1651, 1844
AciI CCGC 4 cut(s) 432, 434, 633, 1585
AclWI GGATC 5 cut(s) 345, 400, 462, 1432, 1471
AcuI CTGAAG 2 cut(s) 155, 1026
AfaI GTAC 8 cut(s) 19, 1267, 1920, 2202, 2320, 2389, 2596, 2734
AfeI AGCGCT 1 cut(s) 727
AfiI CCNNNNNNNGG 4 cut(s) 377, 639, 1256, 1520
AflII CTTAAG 2 cut(s) 61, 1466
AgeI ACCGGT 1 cut(s) 1995
Alw21I GWGCWC 1 cut(s) 779
Alw26I GTCTC 4 cut(s) 231, 1344, 1532, 2912
AlwI GGATC 5 cut(s) 345, 400, 462, 1432, 1471
AlwNI CAGNNNCTG 2 cut(s) 466, 1054
Ama87I CYCGRG 1 cut(s) 866
Aor13HI TCCGGA 3 cut(s) 580, 1651, 1844
Aor51HI AGCGCT 1 cut(s) 727
AoxI GGCC 1 cut(s) 673
AseI ATTAAT 1 cut(s) 1659
AsiGI ACCGGT 1 cut(s) 1995
Asp700I GAANNNNTTC 1 cut(s) 1125
AspA2I CCTAGG 1 cut(s) 985
AspLEI GCGC 1 cut(s) 728
AspS9I GGNCC 1 cut(s) 385
AvaI CYCGRG 1 cut(s) 866
AvaII GGWCC 1 cut(s) 385
AvrII CCTAGG 1 cut(s) 985
BaeGI GKGCMC 1 cut(s) 867
BaeI ACNNNNGTAYC 4 cut(s) 916, 949, 1902, 1935
BanI GGYRCC 1 cut(s) 629
BauI CACGAG 1 cut(s) 1914
BbsI GAAGAC 1 cut(s) 710
Bbv12I GWGCWC 1 cut(s) 779
BccI CCATC 5 cut(s) 241, 523, 620, 1180, 1691
BceAI ACGGC 1 cut(s) 1719
BcgI CGANNNNNNTGC 2 cut(s) 1711, 1745
BciVI GTATCC 1 cut(s) 917
BcoDI GTCTC 4 cut(s) 231, 1344, 1532, 2912
BfaI CTAG 8 cut(s) 359, 780, 935, 986, 1571, 2048, 2070, 2136
BfmI CTRYAG 2 cut(s) 1046, 1349
BfoI RGCGCY 1 cut(s) 729
BfrI CTTAAG 2 cut(s) 61, 1466
BfuI GTATCC 1 cut(s) 917
BglI GCCNNNNNGGC 1 cut(s) 2079
BglII AGATCT 3 cut(s) 530, 1165, 1567
BlnI CCTAGG 1 cut(s) 985
BmcAI AGTACT 2 cut(s) 1267, 2320
Bme18I GGWCC 1 cut(s) 385
BmeT110I CYCGRG 1 cut(s) 866
BmgT120I GGNCC 1 cut(s) 385
BmiI GGNNCC 4 cut(s) 387, 631, 811, 1458
BmrI ACTGGG 2 cut(s) 1014, 1918
BmuI ACTGGG 2 cut(s) 1014, 1918
BpiI GAAGAC 1 cut(s) 710
BpmI CTGGAG 2 cut(s) 443, 590
BpuEI CTTGAG 3 cut(s) 416, 547, 869
BsaI GGTCTC 1 cut(s) 2912
BsaJI CCNNGG 4 cut(s) 432, 813, 910, 985
BsaWI WCCGGW 4 cut(s) 580, 1651, 1844, 1995
BsaXI ACNNNNNCTCC 6 cut(s) 794, 824, 1356, 1386, 2029, 2059
Bsc4I CCNNNNNNNGG 4 cut(s) 377, 639, 1256, 1520
Bse118I RCCGGY 1 cut(s) 1995
Bse1I ACTGG 7 cut(s) 573, 1020, 1793, 1924, 2494, 2563, 2701
Bse3DI GCAATG 1 cut(s) 103
BseAI TCCGGA 3 cut(s) 580, 1651, 1844
BseDI CCNNGG 4 cut(s) 432, 813, 910, 985
BseGI GGATG 7 cut(s) 563, 998, 1303, 1565, 1634, 1976, 2915
BseLI CCNNNNNNNGG 4 cut(s) 377, 639, 1256, 1520
BseMI GCAATG 1 cut(s) 103
BseMII CTCAG 3 cut(s) 969, 1101, 2964
BseNI ACTGG 7 cut(s) 573, 1020, 1793, 1924, 2494, 2563, 2701
BseRI GAGGAG 4 cut(s) 842, 1307, 1898, 2836
BseSI GKGCMC 1 cut(s) 867
BsgI GTGCAG 1 cut(s) 50
Bsh1236I CGCG 1 cut(s) 434
BshFI GGCC 1 cut(s) 675
BshNI GGYRCC 1 cut(s) 629
BshTI ACCGGT 1 cut(s) 1995
BsiHKAI GWGCWC 1 cut(s) 779
BsiHKCI CYCGRG 1 cut(s) 866
BsiSI CCGG 4 cut(s) 581, 1652, 1845, 1996
BslFI GGGAC 3 cut(s) 371, 1214, 1714
BslI CCNNNNNNNGG 4 cut(s) 377, 639, 1256, 1520
BsmAI GTCTC 4 cut(s) 231, 1344, 1532, 2912
BsmFI GGGAC 3 cut(s) 371, 1214, 1714
BsmI GAATGC 1 cut(s) 327
BsnI GGCC 1 cut(s) 675
Bso31I GGTCTC 1 cut(s) 2912
BsoBI CYCGRG 1 cut(s) 866
Bsp1286I GDGCHC 2 cut(s) 779, 867
Bsp13I TCCGGA 3 cut(s) 580, 1651, 1844
Bsp19I CCATGG 1 cut(s) 910
BspACI CCGC 4 cut(s) 432, 434, 633, 1585
BspANI GGCC 1 cut(s) 675
BspCNI CTCAG 3 cut(s) 968, 1102, 2963
BspEI TCCGGA 3 cut(s) 580, 1651, 1844
BspFNI CGCG 1 cut(s) 434
BspLI GGNNCC 4 cut(s) 387, 631, 811, 1458
BspMAI CTGCAG 2 cut(s) 1050, 1353
BspPI GGATC 5 cut(s) 345, 400, 462, 1432, 1471
BspT107I GGYRCC 1 cut(s) 629
BspTI CTTAAG 2 cut(s) 61, 1466
BspTNI GGTCTC 1 cut(s) 2912
BsrDI GCAATG 1 cut(s) 103
BsrFI RCCGGY 1 cut(s) 1995
BsrI ACTGG 7 cut(s) 573, 1020, 1793, 1924, 2494, 2563, 2701
BssAI RCCGGY 1 cut(s) 1995
BssECI CCNNGG 4 cut(s) 432, 813, 910, 985
BssNAI GTATAC 8 cut(s) 2132, 2270, 2339, 2408, 2477, 2615, 2753, 2822
BssSI CACGAG 1 cut(s) 1914
BssT1I CCWWGG 3 cut(s) 813, 910, 985
Bst1107I GTATAC 8 cut(s) 2132, 2270, 2339, 2408, 2477, 2615, 2753, 2822
Bst2BI CACGAG 1 cut(s) 1914
Bst4CI ACNGT 5 cut(s) 17, 297, 903, 1205, 2062
Bst6I CTCTTC 1 cut(s) 540
BstAFI CTTAAG 2 cut(s) 61, 1466
BstDEI CTNAG 9 cut(s) 8, 125, 955, 962, 1110, 1181, 1763, 2260, 2950
BstDSI CCRYGG 2 cut(s) 432, 910
BstF5I GGATG 7 cut(s) 563, 998, 1303, 1565, 1634, 1976, 2915
BstFNI CGCG 1 cut(s) 434
BstH2I RGCGCY 1 cut(s) 729
BstHHI GCGC 1 cut(s) 728
BstMAI GTCTC 4 cut(s) 231, 1344, 1532, 2912
BstMWI GCNNNNNNNGC 5 cut(s) 253, 1315, 1584, 1593, 2079
BstNSI RCATGY 2 cut(s) 601, 843
BstSFI CTRYAG 2 cut(s) 1046, 1349
BstSLI GKGCMC 1 cut(s) 867
BstUI CGCG 1 cut(s) 434
BstV2I GAAGAC 1 cut(s) 710
BstX2I RGATCY 6 cut(s) 337, 454, 530, 1165, 1437, 1567
BstYI RGATCY 6 cut(s) 337, 454, 530, 1165, 1437, 1567
BstZ17I GTATAC 8 cut(s) 2132, 2270, 2339, 2408, 2477, 2615, 2753, 2822
BsuI GTATCC 1 cut(s) 917
BsuRI GGCC 1 cut(s) 675
BtgI CCRYGG 2 cut(s) 432, 910
BtsCI GGATG 7 cut(s) 563, 998, 1303, 1565, 1634, 1976, 2915
BtsI GCAGTG 2 cut(s) 1043, 2090
BtsIMutI CAGTG 5 cut(s) 749, 1027, 1043, 2090, 2958
CaiI CAGNNNCTG 2 cut(s) 466, 1054
CfoI GCGC 1 cut(s) 728
Cfr10I RCCGGY 1 cut(s) 1995
Cfr13I GGNCC 1 cut(s) 385
Cfr42I CCGCGG 1 cut(s) 435
Csp6I GTAC 8 cut(s) 18, 1266, 1919, 2201, 2319, 2388, 2595, 2733
CspAI ACCGGT 1 cut(s) 1995
CviAII CATG 8 cut(s) 334, 598, 771, 840, 911, 1376, 1597, 1870
CviQI GTAC 8 cut(s) 18, 1266, 1919, 2201, 2319, 2388, 2595, 2733
DdeI CTNAG 9 cut(s) 8, 125, 955, 962, 1110, 1181, 1763, 2260, 2950
DraI TTTAAA 1 cut(s) 2028
Eam1104I CTCTTC 1 cut(s) 540
EarI CTCTTC 1 cut(s) 540
Eco130I CCWWGG 3 cut(s) 813, 910, 985
Eco147I AGGCCT 1 cut(s) 675
Eco31I GGTCTC 1 cut(s) 2912
Eco32I GATATC 1 cut(s) 1244
Eco47I GGWCC 1 cut(s) 385
Eco47III AGCGCT 1 cut(s) 727
Eco57I CTGAAG 2 cut(s) 155, 1026
Eco88I CYCGRG 1 cut(s) 866
EcoO109I RGGNCCY 1 cut(s) 385
EcoRI GAATTC 1 cut(s) 263
EcoRV GATATC 1 cut(s) 1244
EcoT14I CCWWGG 3 cut(s) 813, 910, 985
EcoT22I ATGCAT 1 cut(s) 841
ErhI CCWWGG 3 cut(s) 813, 910, 985
FaeI CATG 8 cut(s) 337, 601, 774, 843, 914, 1379, 1600, 1873
FaqI GGGAC 3 cut(s) 371, 1214, 1714
FatI CATG 8 cut(s) 333, 597, 770, 839, 910, 1375, 1596, 1869
FauI CCCGC 1 cut(s) 1592
FokI GGATG 7 cut(s) 570, 1005, 1310, 1572, 1641, 1983, 2902
FspBI CTAG 8 cut(s) 359, 780, 935, 986, 1571, 2048, 2070, 2136
GlaI GCGC 1 cut(s) 727
GsuI CTGGAG 2 cut(s) 443, 590
HaeII RGCGCY 1 cut(s) 729
HaeIII GGCC 1 cut(s) 675
HapII CCGG 4 cut(s) 581, 1652, 1845, 1996
HhaI GCGC 1 cut(s) 728
Hin1II CATG 8 cut(s) 337, 601, 774, 843, 914, 1379, 1600, 1873
Hin6I GCGC 1 cut(s) 726
HinP1I GCGC 1 cut(s) 726
HincII GTYRAC 4 cut(s) 2426, 2633, 2771, 2840
HindII GTYRAC 4 cut(s) 2426, 2633, 2771, 2840
HindIII AAGCTT 4 cut(s) 64, 1637, 1946, 2011
HinfI GANTC 9 cut(s) 715, 869, 889, 1051, 1220, 1525, 1714, 1804, 2841
HpaII CCGG 4 cut(s) 581, 1652, 1845, 1996
Hpy188I TCNGA 9 cut(s) 184, 468, 613, 714, 1111, 1504, 1539, 1809, 1900
HpyAV CCTTC 8 cut(s) 44, 321, 407, 518, 719, 1001, 1478, 1589
HpyCH4III ACNGT 5 cut(s) 17, 297, 903, 1205, 2062
HpyCH4IV ACGT 2 cut(s) 20, 193
HpyF10VI GCNNNNNNNGC 5 cut(s) 253, 1315, 1584, 1593, 2079
HpyF3I CTNAG 9 cut(s) 8, 125, 955, 962, 1110, 1181, 1763, 2260, 2950
HpySE526I ACGT 2 cut(s) 20, 193
Hsp92II CATG 8 cut(s) 337, 601, 774, 843, 914, 1379, 1600, 1873
HspAI GCGC 1 cut(s) 726
Kpn2I TCCGGA 3 cut(s) 580, 1651, 1844
KspI CCGCGG 1 cut(s) 435
LmnI GCTCC 6 cut(s) 643, 815, 829, 1010, 1885, 2854
MaeI CTAG 8 cut(s) 359, 780, 935, 986, 1571, 2048, 2070, 2136
MaeII ACGT 2 cut(s) 20, 193
MaeIII GTNAC 5 cut(s) 361, 1022, 1680, 2147, 2957
MboII GAAGA 9 cut(s) 92, 148, 313, 527, 710, 1160, 1215, 1444, 1447
MflI RGATCY 6 cut(s) 337, 454, 530, 1165, 1437, 1567
MhlI GDGCHC 2 cut(s) 779, 867
MlyI GAGTC 6 cut(s) 724, 878, 1060, 1534, 1813, 2835
MmeI TCCRAC 4 cut(s) 369, 1555, 2082, 2832
Mph1103I ATGCAT 1 cut(s) 841
MroI TCCGGA 3 cut(s) 580, 1651, 1844
MroXI GAANNNNTTC 1 cut(s) 1125
MslI CAYNNNNRTG 2 cut(s) 1595, 1695
MspA1I CMGCKG 3 cut(s) 256, 282, 434
MspCI CTTAAG 2 cut(s) 61, 1466
MspI CCGG 4 cut(s) 581, 1652, 1845, 1996
Mva1269I GAATGC 1 cut(s) 327
MvnI CGCG 1 cut(s) 434
MwoI GCNNNNNNNGC 5 cut(s) 253, 1315, 1584, 1593, 2079
NcoI CCATGG 1 cut(s) 910
NlaIII CATG 8 cut(s) 337, 601, 774, 843, 914, 1379, 1600, 1873
NlaIV GGNNCC 4 cut(s) 387, 631, 811, 1458
NmuCI GTSAC 4 cut(s) 361, 1022, 1680, 2147
NsiI ATGCAT 1 cut(s) 841
NspI RCATGY 2 cut(s) 601, 843
PceI AGGCCT 1 cut(s) 675
PctI GAATGC 1 cut(s) 327
PdmI GAANNNNTTC 1 cut(s) 1125
PfeI GAWTC 3 cut(s) 889, 1220, 1714
PflMI CCANNNNNTGG 1 cut(s) 1520
PinAI ACCGGT 1 cut(s) 1995
PleI GAGTC 6 cut(s) 723, 877, 1059, 1533, 1812, 2835
PpsI GAGTC 6 cut(s) 723, 877, 1059, 1533, 1812, 2835
PpuMI RGGWCCY 1 cut(s) 385
PshBI ATTAAT 1 cut(s) 1659
PsiI TTATAA 1 cut(s) 144
Psp5II RGGWCCY 1 cut(s) 385
PspN4I GGNNCC 4 cut(s) 387, 631, 811, 1458
PspPI GGNCC 1 cut(s) 385
PspPPI RGGWCCY 1 cut(s) 385
PsrI GAACNNNNNNTAC 1 cut(s) 28
PstI CTGCAG 2 cut(s) 1050, 1353
PstNI CAGNNNCTG 2 cut(s) 466, 1054
PsuI RGATCY 6 cut(s) 337, 454, 530, 1165, 1437, 1567
PvuII CAGCTG 2 cut(s) 256, 282
RsaI GTAC 8 cut(s) 19, 1267, 1920, 2202, 2320, 2389, 2596, 2734
RsaNI GTAC 8 cut(s) 18, 1266, 1919, 2201, 2319, 2388, 2595, 2733
RseI CAYNNNNRTG 2 cut(s) 1595, 1695
SacII CCGCGG 1 cut(s) 435
SalI GTCGAC 4 cut(s) 2424, 2631, 2769, 2838
Sau96I GGNCC 1 cut(s) 385
ScaI AGTACT 2 cut(s) 1267, 2320
SchI GAGTC 6 cut(s) 724, 878, 1060, 1534, 1813, 2835
SduI GDGCHC 2 cut(s) 779, 867
SfcI CTRYAG 2 cut(s) 1046, 1349
Sfr303I CCGCGG 1 cut(s) 435
SgrBI CCGCGG 1 cut(s) 435
SinI GGWCC 1 cut(s) 385
SmiMI CAYNNNNRTG 2 cut(s) 1595, 1695
SmlI CTYRAG 5 cut(s) 61, 395, 526, 884, 1466
SmoI CTYRAG 5 cut(s) 61, 395, 526, 884, 1466
SseBI AGGCCT 1 cut(s) 675
SsiI CCGC 4 cut(s) 432, 434, 633, 1585
SspI AATATT 1 cut(s) 1314
SspMI CTAG 8 cut(s) 359, 780, 935, 986, 1571, 2048, 2070, 2136
StuI AGGCCT 1 cut(s) 675
StyI CCWWGG 3 cut(s) 813, 910, 985
TaaI ACNGT 5 cut(s) 17, 297, 903, 1205, 2062
TaiI ACGT 2 cut(s) 23, 196
TaqI TCGA 9 cut(s) 1252, 1282, 1329, 1407, 2287, 2425, 2632, 2770, 2839
TaqII GACCGA 1 cut(s) 2894
TatI WGTACW 2 cut(s) 1265, 2318
TfiI GAWTC 3 cut(s) 889, 1220, 1714
TscAI CASTG 5 cut(s) 756, 1027, 1050, 2097, 2958
TseFI GTSAC 4 cut(s) 361, 1022, 1680, 2147
Tsp45I GTSAC 4 cut(s) 361, 1022, 1680, 2147
TspGWI ACGGA 1 cut(s) 2050
TspRI CASTG 5 cut(s) 756, 1027, 1050, 2097, 2958
Van91I CCANNNNNTGG 1 cut(s) 1520
Vha464I CTTAAG 2 cut(s) 61, 1466
VpaK11BI GGWCC 1 cut(s) 385
VspI ATTAAT 1 cut(s) 1659
XbaI TCTAGA 2 cut(s) 934, 1570
XceI RCATGY 2 cut(s) 601, 843
XcmI CCANNNNNNNNNTGG 2 cut(s) 917, 1936
XmaJI CCTAGG 1 cut(s) 985
XmnI GAANNNNTTC 1 cut(s) 1125
XspI CTAG 8 cut(s) 359, 780, 935, 986, 1571, 2048, 2070, 2136
ZrmI AGTACT 2 cut(s) 1267, 2320
Zsp2I ATGCAT 1 cut(s) 841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.