Rh5CG318000

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000307
Physical Location & Seq
Reverse (-)
35219730 .. 35221626
1897 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG318000.1

Sequence Viewer

Length: 1575 bp
ATGCTGAGAAATACTTATCCAAATACTATCGTAAAATGGACTTCAGATGAAGGTTTCAGTTTCATAGATTGCAGATATTCAGACGAAAATGCCGACGATGATGAAGGATATATGTCTTTCCATAAGATCATTGAGGATCGAATTCATCATGACAAGCCATTTGAAATTCGTTTTCGTCATACTCAACCTTCCCATCCTTTTCTATACGTTCAAGGTGATGGAATTCCGGACTGGTGCACTCAGTGGAACACTGGTTCTTCTGTTACATTGCAACTAACTGGTCCAGAAGACAAGACTAATAGTACGTGGATGGGATTAGCCTTATTTGTTGCTTTTGAACACATTCTGAATGATCAAGTGAAAGAAATTCTCTGTCATCTGAGCATCGACGAAGGTGGTCCTCAAATTCCTTTAGTTTTTCAAGACTTGGATGATGAGTCAGTTGGACTATGTTGCTACTTGCCACGAGGCTGCGGGGGGTTTGCAGGACAGCTGGATAAAGCCAGTCGAATTAATGCTACATTTTTACCAACTACTTTACCGGTGAAATCGTGTGGGATACAGCCAATATCCGAGCATGATGCTCCAATGTTTGCTCAGGATTTAACCCAGACTGCTTTTGCTGACGTACGTGCTCAACAGGAAAAGGCCAGTAAGTACACTGTTTATCGACATCGTAAGAGAATGTTAGATAAGGCAACGAAATTGGAAAGATCTGGAGACGTGCTGGTACCTGCGTACAATTCTTTAAATGTGAATCAACACAAGTGGAAAATTGATCATGATATCCATCCCAGATTAGAGGAAGAGCTAAAGCTGTTCAGATTGCTTTCAGGGCTCTACGAGGGAAGCAATGGACGTCAGAAGAAATTTCATTTTTGTTTTCCAGATCCAGTAATTTCGCCCTGGTTCATCAATCACTACGCAGGGAATGTAGCACTTTGTGACCTTCCTCAGAACTTAATCGATGATAAGAGATGGATTGGATTAGAAGTGTATGTTGTGTTTACACCTGGTGACAGTGACCACAATCTTTCTGATTCCTTCCTTCATGTTGATTTAAGTGCACATGAAAGTAGTGTGATGCATTCGTCCATCAAAATTGAGAGTTGTTCTGGGTCATATCAACTTATTGTACTACATGTACCACGGATGCATTTTCCAGAACAGCTGACTCATTATCAGGTTATTAGCACGTTGTTTACAACCAGTACCCCAATTGTTGAGATTATAGTGTGCGGGAGCCGTTTGGTATATGAGCATGATCTGGAAGATTTAATCCTTTCATTAACTGCGTGTACATTGAGGAAGCCACATTCAATTGGCCAAGTTTATTCCCAGGCCCAAGTATATGTTGAAACTATGGAAAAGAAAGCAGATGAAAATATCCAGTGCAATGCAAAGGGAGGAGAAATGTCATCCACTGATGGCCATTCATCGTTTCGAAGAAGTGTCAAACAAATTGAAGTACCAGATAAAGTTCGCAGTTCAATATTGCAGAAATATAGATGCCATATCCAAGGAAAGCAAGGAATACTAGAGTCTGACAAAATAATTGTCCACTCTAAGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 LRR_8 NB-ARC TIR

Protein Analysis

524

Amino Acids

59.53

Weight (kDa)

5.88

Isoelectric Point (pI)

48.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000307)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g16600 FvH4_1g16610 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16621 FvH4_1g16630 FvH4_1g16640 FvH4_1g16640 FvH4_1g16650 FvH4_1g16650 FvH4_3g27631 FvH4_4g11392 FvH4_4g11542
prunus_persica Prupe.4G224500_v2.0.a1 Prupe.4G226900_v2.0.a1 Prupe.4G227000_v2.0.a1
pyrus_communis pycom11g18180 pycom11g18210 pycom11g18230 pycom11g18270 pycom11g18350 pycom11g18360 pycom11g18370
rosa_chinensis RchiOBHm_Chr2g0106511 RchiOBHm_Chr2g0106541 RchiOBHm_Chr2g0106551 RchiOBHm_Chr2g0106571 RchiOBHm_Chr2g0124621 RchiOBHm_Chr6g0251591 RchiOBHm_Chr6g0251631 RchiOBHm_Chr6g0251641
rosa_laevigata RLG00000015443 RLG00000015444 RLG00000015458 RLG00000017510 RLG00000017511 RLG00000017512 RLG00000017515 RLG00000017516 RLG00000017517 RLG00000018809 RLG00000020934 RLG00000020935 RLG00000034092
rosa_multiflora Rmu_co8285777.1_g000001 Rmu_sc0000762.1_g000001 Rmu_sc0001872.1_g000006 Rmu_sc0005255.1_g000019 Rmu_sc0005597.1_g000006 Rmu_sc0012104.1_g000001 Rmu_sc0017105.1_g000011 Rmu_sc0022904.1_g000001 Rmu_ssc0000135.1_g000049 Rmu_ssc0000213.1_g000047
rosa_roxburghii Rroxscaffold_2G00092830 Rroxscaffold_2G00119790 Rroxscaffold_2G00137010 Rroxscaffold_2G00137030 Rroxscaffold_2G00137070 Rroxscaffold_7G00216560
rosa_rugosa Rorug02G0136100 Rorug02G0136200 Rorug02G0136300 Rorug02G0136400 Rorug02G0251800 Rorug02G0251800 Rorug02G0455500 Rorug02G0455600 Rorug02G0455700 Rorug05G0195300
rosa_samantha Rh2AG187400 Rh2AG187500 Rh2AG187600 Rh2AG310500 Rh2BG198200 Rh2BG198300 Rh2BG198400 Rh2BG198600 Rh2BG318900 Rh2BG534300 Rh2CG192400 Rh2CG192500 Rh2CG192600 Rh2CG297500 Rh2DG193500 Rh2DG193600 Rh2DG193800 Rh2DG334200 Rh2DG543100 Rh5AG280400 Rh5BG285800 Rh5BG285900 Rh5CG317900 Rh5CG318000 Rh5DG294600 Rh5DG294700 Rh6AG012200 Rh6AG012700 Rh6BG011200 Rh6BG011700
rosa_wichuraiana Rw0G009380 Rw2G014610 Rw2G014630 Rw2G014640 Rw2G014680 Rw2G025120 Rw2G043000 Rw5G026490 Rw6G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 862
Acc36I ACCTGC 1 cut(s) 742
Acc65I GGTACC 1 cut(s) 730
AccB1I GGYRCC 1 cut(s) 730
AccIII TCCGGA 1 cut(s) 226
AciI CCGC 2 cut(s) 474, 1239
AclWI GGATC 2 cut(s) 144, 884
AcoI YGGCCR 2 cut(s) 1324, 1429
AcsI RAATTY 6 cut(s) 141, 165, 222, 366, 405, 869
AcuI CTGAAG 1 cut(s) 27
AcyI GRCGYC 1 cut(s) 859
AdeI CACNNNGTG 3 cut(s) 243, 944, 1016
AfiI CCNNNNNNNGG 1 cut(s) 1567
AflIII ACRYGT 1 cut(s) 1141
AgeI ACCGGT 1 cut(s) 541
AgsI TTSAA 8 cut(s) 164, 212, 338, 422, 1320, 1358, 1466, 1491
AjiI CACGTC 1 cut(s) 724
AjnI CCWGG 3 cut(s) 905, 1012, 1338
AloI GAACNNNNNNTCC 2 cut(s) 238, 270
AluBI AGCT 4 cut(s) 493, 811, 817, 1171
AluI AGCT 4 cut(s) 493, 811, 817, 1171
Alw21I GWGCWC 3 cut(s) 239, 637, 1069
Alw26I GTCTC 1 cut(s) 714
Alw44I GTGCAC 2 cut(s) 235, 1065
AlwI GGATC 2 cut(s) 144, 884
Aor13HI TCCGGA 1 cut(s) 226
AoxI GGCC 4 cut(s) 648, 1324, 1341, 1429
ApaLI GTGCAC 2 cut(s) 235, 1065
ApeKI GCWGC 1 cut(s) 471
ApoI RAATTY 6 cut(s) 141, 165, 222, 366, 405, 869
ArsI GACNNNNNNTTYG 4 cut(s) 143, 175, 1542, 1574
AseI ATTAAT 1 cut(s) 513
AsiGI ACCGGT 1 cut(s) 541
Asp700I GAANNNNTTC 1 cut(s) 342
Asp718I GGTACC 1 cut(s) 730
AspS9I GGNCC 3 cut(s) 281, 398, 1342
AsuHPI GGTGA 3 cut(s) 227, 556, 1028
AsuII TTCGAA 1 cut(s) 1444
AvaII GGWCC 2 cut(s) 281, 398
BaeGI GKGCMC 2 cut(s) 239, 1069
BaeI ACNNNNGTAYC 2 cut(s) 722, 755
BalI TGGCCA 2 cut(s) 1326, 1431
BanI GGYRCC 1 cut(s) 730
BanII GRGCYC 1 cut(s) 840
BauI CACGAG 1 cut(s) 465
BbsI GAAGAC 1 cut(s) 294
Bbv12I GWGCWC 3 cut(s) 239, 637, 1069
BbvI GCAGC 1 cut(s) 458
BccI CCATC 7 cut(s) 201, 212, 304, 798, 972, 1103, 1421
BceAI ACGGC 1 cut(s) 1230
BcgI CGANNNNNNTGC 2 cut(s) 563, 597
BciT130I CCWGG 3 cut(s) 907, 1014, 1340
BciVI GTATCC 1 cut(s) 552
BclI TGATCA 2 cut(s) 352, 778
BcoDI GTCTC 1 cut(s) 714
BfaI CTAG 1 cut(s) 1538
BfuAI ACCTGC 1 cut(s) 742
BfuI GTATCC 1 cut(s) 552
BglII AGATCT 1 cut(s) 713
BisI GCNGC 1 cut(s) 472
BlsI GCNGC 1 cut(s) 473
Bme1390I CCNGG 3 cut(s) 907, 1014, 1340
Bme18I GGWCC 2 cut(s) 281, 398
BmgBI CACGTC 1 cut(s) 724
BmgT120I GGNCC 3 cut(s) 281, 398, 1342
BmiI GGNNCC 2 cut(s) 732, 1244
BmrFI CCNGG 3 cut(s) 907, 1014, 1340
BmsI GCATC 5 cut(s) 393, 571, 1074, 1143, 1499
BpiI GAAGAC 1 cut(s) 294
BpmI CTGGAG 1 cut(s) 738
Bpu10I CCTNAGC 1 cut(s) 597
Bpu14I TTCGAA 1 cut(s) 1444
Bsa29I ATCGAT 1 cut(s) 966
BsaAI YACGTR 2 cut(s) 306, 632
BsaBI GATNNNNATC 1 cut(s) 789
BsaHI GRCGYC 1 cut(s) 859
BsaJI CCNNGG 4 cut(s) 905, 1148, 1338, 1519
BsaWI WCCGGW 2 cut(s) 226, 541
Bsc4I CCNNNNNNNGG 1 cut(s) 1567
Bse118I RCCGGY 1 cut(s) 541
Bse1I ACTGG 8 cut(s) 236, 256, 283, 504, 651, 893, 1209, 1390
Bse3DI GCAATG 3 cut(s) 266, 859, 1402
Bse8I GATNNNNATC 1 cut(s) 789
BseAI TCCGGA 1 cut(s) 226
BseBI CCWGG 3 cut(s) 907, 1014, 1340
BseCI ATCGAT 1 cut(s) 966
BseDI CCNNGG 4 cut(s) 905, 1148, 1338, 1519
BseGI GGATG 6 cut(s) 193, 315, 436, 790, 1158, 1418
BseJI GATNNNNATC 1 cut(s) 789
BseLI CCNNNNNNNGG 1 cut(s) 1567
BseMI GCAATG 3 cut(s) 266, 859, 1402
BseMII CTCAG 4 cut(s) 254, 371, 611, 968
BseNI ACTGG 8 cut(s) 236, 256, 283, 504, 651, 893, 1209, 1390
BseRI GAGGAG 1 cut(s) 1422
BseSI GKGCMC 2 cut(s) 239, 1069
BseXI GCAGC 1 cut(s) 458
BshFI GGCC 4 cut(s) 650, 1326, 1343, 1431
BshNI GGYRCC 1 cut(s) 730
BshTI ACCGGT 1 cut(s) 541
BshVI ATCGAT 1 cut(s) 966
BsiHKAI GWGCWC 3 cut(s) 239, 637, 1069
BsiSI CCGG 2 cut(s) 227, 542
BsiWI CGTACG 1 cut(s) 628
BslI CCNNNNNNNGG 1 cut(s) 1567
BsmAI GTCTC 1 cut(s) 714
BsmBI CGTCTC 1 cut(s) 714
BsmI GAATGC 1 cut(s) 1087
BsnI GGCC 4 cut(s) 650, 1326, 1343, 1431
Bsp119I TTCGAA 1 cut(s) 1444
Bsp1286I GDGCHC 4 cut(s) 239, 637, 840, 1069
Bsp13I TCCGGA 1 cut(s) 226
Bsp1407I TGTACA 1 cut(s) 1298
Bsp143I GATC 7 cut(s) 126, 136, 352, 713, 778, 889, 1264
BspACI CCGC 2 cut(s) 474, 1239
BspANI GGCC 4 cut(s) 650, 1326, 1343, 1431
BspCNI CTCAG 4 cut(s) 253, 372, 610, 967
BspDI ATCGAT 1 cut(s) 966
BspEI TCCGGA 1 cut(s) 226
BspHI TCATGA 2 cut(s) 148, 781
BspLI GGNNCC 2 cut(s) 732, 1244
BspMI ACCTGC 1 cut(s) 742
BspPI GGATC 2 cut(s) 144, 884
BspQI GCTCTTC 1 cut(s) 801
BspT104I TTCGAA 1 cut(s) 1444
BspT107I GGYRCC 1 cut(s) 730
BsrDI GCAATG 3 cut(s) 266, 859, 1402
BsrFI RCCGGY 1 cut(s) 541
BsrGI TGTACA 1 cut(s) 1298
BsrI ACTGG 8 cut(s) 236, 256, 283, 504, 651, 893, 1209, 1390
BssAI RCCGGY 1 cut(s) 541
BssECI CCNNGG 4 cut(s) 905, 1148, 1338, 1519
BssMI GATC 7 cut(s) 126, 136, 352, 713, 778, 889, 1264
BssNI GRCGYC 1 cut(s) 859
BssSI CACGAG 1 cut(s) 465
BssT1I CCWWGG 1 cut(s) 1519
Bst2BI CACGAG 1 cut(s) 465
Bst2UI CCWGG 3 cut(s) 907, 1014, 1340
Bst4CI ACNGT 2 cut(s) 664, 1022
Bst6I CTCTTC 1 cut(s) 801
BstACI GRCGYC 1 cut(s) 859
BstAUI TGTACA 1 cut(s) 1298
BstBAI YACGTR 2 cut(s) 306, 632
BstBI TTCGAA 1 cut(s) 1444
BstDEI CTNAG 7 cut(s) 5, 240, 380, 597, 954, 1566, 1572
BstDSI CCRYGG 1 cut(s) 1148
BstF5I GGATG 6 cut(s) 193, 315, 436, 790, 1158, 1418
BstKTI GATC 7 cut(s) 129, 139, 355, 716, 781, 892, 1267
BstMAI GTCTC 1 cut(s) 714
BstMBI GATC 7 cut(s) 126, 136, 352, 713, 778, 889, 1264
BstMWI GCNNNNNNNGC 1 cut(s) 835
BstNI CCWGG 3 cut(s) 907, 1014, 1340
BstNSI RCATGY 1 cut(s) 1145
BstSCI CCNGG 3 cut(s) 905, 1012, 1338
BstSLI GKGCMC 2 cut(s) 239, 1069
BstV1I GCAGC 1 cut(s) 458
BstV2I GAAGAC 1 cut(s) 294
BstX2I RGATCY 2 cut(s) 713, 889
BstYI RGATCY 2 cut(s) 713, 889
Bsu15I ATCGAT 1 cut(s) 966
BsuI GTATCC 1 cut(s) 552
BsuRI GGCC 4 cut(s) 650, 1326, 1343, 1431
BsuTUI ATCGAT 1 cut(s) 966
BtgI CCRYGG 1 cut(s) 1148
BtrI CACGTC 1 cut(s) 724
BtsCI GGATG 6 cut(s) 193, 315, 436, 790, 1158, 1418
BtsIMutI CAGTG 6 cut(s) 248, 249, 660, 1027, 1397, 1422
BveI ACCTGC 1 cut(s) 742
CciI TCATGA 2 cut(s) 148, 781
Cfr10I RCCGGY 1 cut(s) 541
Cfr13I GGNCC 3 cut(s) 281, 398, 1342
ClaI ATCGAT 1 cut(s) 966
CsiI ACCWGGT 1 cut(s) 1012
CspAI ACCGGT 1 cut(s) 541
CspCI CAANNNNNGTGG 2 cut(s) 749, 784
CviAII CATG 7 cut(s) 149, 578, 782, 1052, 1070, 1142, 1262
DdeI CTNAG 7 cut(s) 5, 240, 380, 597, 954, 1566, 1572
DpnI GATC 7 cut(s) 128, 138, 354, 715, 780, 891, 1266
DpnII GATC 7 cut(s) 126, 136, 352, 713, 778, 889, 1264
DraI TTTAAA 1 cut(s) 750
DraIII CACNNNGTG 3 cut(s) 243, 944, 1016
EaeI YGGCCR 2 cut(s) 1324, 1429
Eam1104I CTCTTC 1 cut(s) 801
EarI CTCTTC 1 cut(s) 801
Eco130I CCWWGG 1 cut(s) 1519
Eco24I GRGCYC 1 cut(s) 840
Eco32I GATATC 1 cut(s) 787
Eco47I GGWCC 2 cut(s) 281, 398
Eco57I CTGAAG 1 cut(s) 27
EcoRI GAATTC 2 cut(s) 141, 222
EcoRII CCWGG 3 cut(s) 905, 1012, 1338
EcoRV GATATC 1 cut(s) 787
EcoT14I CCWWGG 1 cut(s) 1519
EcoT22I ATGCAT 2 cut(s) 1089, 1158
EcoT38I GRGCYC 1 cut(s) 840
ErhI CCWWGG 1 cut(s) 1519
Esp3I CGTCTC 1 cut(s) 714
FaeI CATG 7 cut(s) 152, 581, 785, 1055, 1073, 1145, 1265
FatI CATG 7 cut(s) 148, 577, 781, 1051, 1069, 1141, 1261
FauI CCCGC 2 cut(s) 467, 1232
FbaI TGATCA 2 cut(s) 352, 778
Fnu4HI GCNGC 1 cut(s) 472
FokI GGATG 6 cut(s) 180, 322, 443, 777, 1165, 1405
FriOI GRGCYC 1 cut(s) 840
Fsp4HI GCNGC 1 cut(s) 472
FspBI CTAG 1 cut(s) 1538
GluI GCNGC 1 cut(s) 472
GsuI CTGGAG 1 cut(s) 738
HaeIII GGCC 4 cut(s) 650, 1326, 1343, 1431
HapII CCGG 2 cut(s) 227, 542
Hin1I GRCGYC 1 cut(s) 859
Hin1II CATG 7 cut(s) 152, 581, 785, 1055, 1073, 1145, 1265
HinfI GANTC 5 cut(s) 437, 757, 1040, 1174, 1541
HpaII CCGG 2 cut(s) 227, 542
HphI GGTGA 3 cut(s) 227, 556, 1028
Hpy166II GTNNAC 7 cut(s) 237, 660, 1008, 1067, 1203, 1299, 1561
Hpy8I GTNNAC 7 cut(s) 237, 660, 1008, 1067, 1203, 1299, 1561
Hpy99I CGWCG 2 cut(s) 98, 392
HpyAV CCTTC 7 cut(s) 44, 98, 198, 386, 959, 1054, 1058
HpyCH4III ACNGT 2 cut(s) 664, 1022
HpyCH4IV ACGT 7 cut(s) 207, 305, 627, 631, 723, 859, 1196
HpyF10VI GCNNNNNNNGC 1 cut(s) 835
HpyF3I CTNAG 7 cut(s) 5, 240, 380, 597, 954, 1566, 1572
HpySE526I ACGT 7 cut(s) 207, 305, 627, 631, 723, 859, 1196
Hsp92I GRCGYC 1 cut(s) 859
Hsp92II CATG 7 cut(s) 152, 581, 785, 1055, 1073, 1145, 1265
Kpn2I TCCGGA 1 cut(s) 226
KpnI GGTACC 1 cut(s) 734
Ksp22I TGATCA 2 cut(s) 352, 778
Kzo9I GATC 7 cut(s) 126, 136, 352, 713, 778, 889, 1264
LguI GCTCTTC 1 cut(s) 801
LmnI GCTCC 2 cut(s) 589, 1242
Lsp1109I GCAGC 1 cut(s) 458
LweI GCATC 5 cut(s) 393, 571, 1074, 1143, 1499
MabI ACCWGGT 1 cut(s) 1012
MaeI CTAG 1 cut(s) 1538
MaeII ACGT 7 cut(s) 207, 305, 627, 631, 723, 859, 1196
MaeIII GTNAC 4 cut(s) 262, 944, 1016, 1022
MalI GATC 7 cut(s) 128, 138, 354, 715, 780, 891, 1266
MboI GATC 7 cut(s) 126, 136, 352, 713, 778, 889, 1264
MboII GAAGA 6 cut(s) 249, 299, 818, 877, 1283, 1458
MfeI CAATTG 2 cut(s) 1218, 1320
MflI RGATCY 2 cut(s) 713, 889
MhlI GDGCHC 4 cut(s) 239, 637, 840, 1069
MlsI TGGCCA 2 cut(s) 1326, 1431
MluNI TGGCCA 2 cut(s) 1326, 1431
MlyI GAGTC 3 cut(s) 446, 1168, 1550
MmeI TCCRAC 1 cut(s) 424
MnlI CCTC 8 cut(s) 127, 411, 461, 796, 838, 963, 1299, 1400
Mox20I TGGCCA 2 cut(s) 1326, 1431
Mph1103I ATGCAT 2 cut(s) 1089, 1158
MroI TCCGGA 1 cut(s) 226
MroXI GAANNNNTTC 1 cut(s) 342
MscI TGGCCA 2 cut(s) 1326, 1431
MseI TTAA 7 cut(s) 513, 605, 749, 962, 1061, 1277, 1289
Msp20I TGGCCA 2 cut(s) 1326, 1431
MspA1I CMGCKG 2 cut(s) 493, 1171
MspI CCGG 2 cut(s) 227, 542
MspR9I CCNGG 3 cut(s) 907, 1014, 1340
MunI CAATTG 2 cut(s) 1218, 1320
Mva1269I GAATGC 1 cut(s) 1087
MvaI CCWGG 3 cut(s) 907, 1014, 1340
MwoI GCNNNNNNNGC 1 cut(s) 835
NdeII GATC 7 cut(s) 126, 136, 352, 713, 778, 889, 1264
NlaIII CATG 7 cut(s) 152, 581, 785, 1055, 1073, 1145, 1265
NlaIV GGNNCC 2 cut(s) 732, 1244
NmuCI GTSAC 3 cut(s) 944, 1016, 1022
NsiI ATGCAT 2 cut(s) 1089, 1158
NspI RCATGY 1 cut(s) 1145
NspV TTCGAA 1 cut(s) 1444
PagI TCATGA 2 cut(s) 148, 781
PciI ACATGT 1 cut(s) 1141
PciSI GCTCTTC 1 cut(s) 801
PcsI WCGNNNNNNNCGW 1 cut(s) 90
PctI GAATGC 1 cut(s) 1087
PdmI GAANNNNTTC 1 cut(s) 342
PfeI GAWTC 2 cut(s) 757, 1040
Pfl23II CGTACG 1 cut(s) 628
PinAI ACCGGT 1 cut(s) 541
PkrI GCNGC 1 cut(s) 473
PleI GAGTC 3 cut(s) 445, 1168, 1549
PpsI GAGTC 3 cut(s) 445, 1168, 1549
Ppu21I YACGTR 2 cut(s) 306, 632
PscI ACATGT 1 cut(s) 1141
PshBI ATTAAT 1 cut(s) 513
Psp6I CCWGG 3 cut(s) 905, 1012, 1338
PspGI CCWGG 3 cut(s) 905, 1012, 1338
PspLI CGTACG 1 cut(s) 628
PspN4I GGNNCC 2 cut(s) 732, 1244
PspPI GGNCC 3 cut(s) 281, 398, 1342
PsuI RGATCY 2 cut(s) 713, 889
PvuII CAGCTG 2 cut(s) 493, 1171
SapI GCTCTTC 1 cut(s) 801
SaqAI TTAA 7 cut(s) 513, 605, 749, 962, 1061, 1277, 1289
SatI GCNGC 1 cut(s) 472
Sau3AI GATC 7 cut(s) 126, 136, 352, 713, 778, 889, 1264
Sau96I GGNCC 3 cut(s) 281, 398, 1342
SchI GAGTC 3 cut(s) 446, 1168, 1550
ScrFI CCNGG 3 cut(s) 907, 1014, 1340
SduI GDGCHC 4 cut(s) 239, 637, 840, 1069
SexAI ACCWGGT 1 cut(s) 1012
SfaNI GCATC 5 cut(s) 393, 571, 1074, 1143, 1499
SfuI TTCGAA 1 cut(s) 1444
SinI GGWCC 2 cut(s) 281, 398
SsiI CCGC 2 cut(s) 474, 1239
SspI AATATT 1 cut(s) 1494
SspMI CTAG 1 cut(s) 1538
StyD4I CCNGG 3 cut(s) 905, 1012, 1338
StyI CCWWGG 1 cut(s) 1519
TaaI ACNGT 2 cut(s) 664, 1022
TaiI ACGT 7 cut(s) 210, 308, 630, 634, 726, 862, 1199
TaqI TCGA 6 cut(s) 139, 387, 508, 670, 966, 1444
TatI WGTACW 3 cut(s) 657, 1135, 1298
TfiI GAWTC 2 cut(s) 757, 1040
Tru1I TTAA 7 cut(s) 513, 605, 749, 962, 1061, 1277, 1289
Tru9I TTAA 7 cut(s) 513, 605, 749, 962, 1061, 1277, 1289
TscAI CASTG 6 cut(s) 248, 256, 667, 1027, 1397, 1429
TseFI GTSAC 3 cut(s) 944, 1016, 1022
TseI GCWGC 1 cut(s) 471
Tsp45I GTSAC 3 cut(s) 944, 1016, 1022
TspGWI ACGGA 1 cut(s) 1165
TspRI CASTG 6 cut(s) 248, 256, 667, 1027, 1397, 1429
VneI GTGCAC 2 cut(s) 235, 1065
VpaK11BI GGWCC 2 cut(s) 281, 398
VspI ATTAAT 1 cut(s) 513
XapI RAATTY 6 cut(s) 141, 165, 222, 366, 405, 869
XceI RCATGY 1 cut(s) 1145
XmnI GAANNNNTTC 1 cut(s) 342
XspI CTAG 1 cut(s) 1538
ZraI GACGTC 1 cut(s) 860
Zsp2I ATGCAT 2 cut(s) 1089, 1158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.