Rh6BG011700

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0000307
Physical Location & Seq
Reverse (-)
1752844 .. 1767935
15092 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG011700.1

Sequence Viewer

Length: 3861 bp
ATGGACTTTGAAAGAAAGGATGAAATTATTCTTCAGCAGCACCTGCAGCTTCGTTACTTTCATACAGAAATTCCTGATTGGTGTCGTCACAAGAGTAGTGGGTCTTCTGTAGTAGCCATGCAAGTCTCTGATCCTGAAATTATTAAGAGCTTGGGAGTAGCCCTGTTTGTTGTTTTTGAAATCTTTGAGAGTGGTCACAATTTTGATAAGAGTTGGGAGTTGCAACAGACCCTTTGTACTTTTAAAGATGACCAAGGACTTGAACTTATCTATATCTTTAAAGAATTTGAAAAATTCCTGGCTGGAACACATGTATTATTTTGCTATGAGCCGCTAAAGTACTTTCAAGTTGCTGGAATGTTGAATAAAGCAAGTCGACTTGAGGCTTCAGTTTCAACACAGAGACCAGATCTGGCGATTAAGTCTTGTGGGATGCAACTGATCTTTCAGGAAGAAGCTAAAGAGTTTGCTCAAAAATTAAGTGAGGCTTGTAATCCTCAGACGGATTTCGAATTTGGTAGACATTGTAAGGAATTGATAAAGGCCAAGGGAAAGAAAAGCTCCGGTAATATAATGGCACCAAATGAAGCAGAAAAGATTAGCTGGAAATTTGATTTTAACATGCACCAGGGAGAACATCTACAGTTGTTGCTTTCAAAAGTCTATGAGGATTTCAATCGGGACATCATATATAATGCAACTTACCCTCATTGCGCTAAACTTCTGGAGTGGTTCGGTGATCATCATCTCAGTAGGGGACCTTCAGTGAAAATCCCGTTACCACCATCTCTATCTACTGATGGGAATTGGATAGGATTGGCTCTATGTGCACGTTTTTCAGACCACGAGAATCAAACTACCTCCATAGACAAAGTGAATCCAGAAATTGCTGAGCTTGTTTGTCATTTGGAAACTGAGAACAGTGGTTTCGAACATCTTCACCACTATCGACCAACCAATGAAGAACTCAAGCGGTTATGTCCTACAGAATACATTTGGCTATCTTATATACCACGTCAGGGGTATCTAGATCAGTTAAATGAGTGTGACCTCTTGGAGGCTTCATTTGCCAGCGAAAGCCGAGGATTATTTGCTGAAGAATGTGGTCTCCGTCTTGTCTACCAGCATGATGAGCAAGAGTTTAAGAATCTGTGTACCTTCATGAACTCGTTTCTGGACAAAAGATCTGAAAGGTTGGAAGAATATGAGGCTCCCAAGAAGGGTAAACACGTTGTAGAATCTGATTTCAACATGCACCCGAGAGAAGATCTACAGTTGCTGCTTTCAGTGCTCTATAAGGGGTATCTAGATCAGTTAAATGAGTGTGACCTCTTGGAGGCTTCATTTGCTAGCGAAAGCCGAGGGTTGTTTGCTGAAGTGTGTGTTCTCCGTCTTGTCTACCAGCATGATGAGCAAGAGTTTAAGGATCTGTGTATCTCCATGAACTCGTTGCTGGACAAAAGATCAGGAAAGTTGGAAGAACAAGAGGCTCCCAAGAAGGGTAAACAAGTTCTAGAATCTGACTTCAACATGCACCCGAGAGAAGTTCTACAGTCGTTGCTTTCAGTACTCTATGAGGGACCATATGGACGTGAAAAGGACTTTGGCCTTTTTTTTCCTCATAAGGTAGTTCCTTTCTGGTTTTTCCATCACTATGCAGGGGACGTGGCACTGTGCGACTTTCCTCTGGACTTATCTGTTGATCAGAGATGGGTCGGTTTAGAACTATTTGTTATGGTTTCGAGTGGTTACACTATCAATGTTGAATCCTTTCTTGATGTTGATTTGTGTTCCAATGAAATTAGCACAGTAAGCACATCCGTAATGATAAACACTTGTCTGGGGTCAGATCAACTTGTTGTAATCCATATACCACGAGTGCGTTTTCCGGAGCAGTTGAATCAATGTCACGGTATCAGCGCATTGTTTAGAACCACCACTCCAGATATGAGGGTTCGAATGTGTGGAAGCCGTTTACTATACGAGCAAGATTTGGAAGACTTGATCCGTGCAATAACTGTGTGCACATTAGACAGTCAAGATGTCATTGATTCACTTTGTCAGCACATCCAACAATTACTTGGAAGTAACTTGCTGGAGGAACCTTCTGATCATGTAGTAGCAGTTGAAACCGTTGAGCAGAATTCAGTGGAAGGAGAAACTGAGGTTGGTCGCAGAAATGATCATTCCTCCACTGAAAGGGAGGACTTGATTCAGGAACGGAGAGAGAAAGTCTTCACTTCAATATTGCACAACTACAGATCTTATCTCCAACAAAAGCATGGTTGTATAGAGTCGGAAAGAATTATATCCCATTCTGAAGGCTATCTTTTGGACGATGGAGATCCAAAGCCGGTGTTTGCCACGCATCATTTACATGTAATGGTTGAGACTCGACTCTATGGGAGCCTTAGCTCAGAAGATTGGAAACAATCTCTCGAGTCATTGCTTCAGTATTTCAAGGGGGCCACTCTCAGTGTCAAAGGACAAATGATTGCTGTTTTAAATCCGTTCACTCCTTCCTCAGTAAACAACTTTTGTTTCCCTCGAAAGGAACTTCCAGGATGGTTCACGCAACAGACGAGAATGCCCAGGATTGGATTGATCATAGACCCACTTGTATGTGATAATGAGAATTGGATGGGATTTGCTGTGTGCGCTACTTTTTCAGTCCACGAGCATCCAAGTGCTGTCCTTGACAACCTGGCCACAAGGACTTTCAACGTTATGTGTCATTTGGCAGCATCGGATGGACGATGTTTGAGTCCTGCCCCGGTGTTTACCATAACAAAAGAGAAATTCAAGTGGCTACATCTTCGTGGATTTATGTGGCTAACCTACATACCTCGTACTTATCTTGCGGAGTTCAGAGAAGTACGTGATGCAGAAGCTAGAATTTATAATGATTGCCCAGGATTGATGGTGACAAGGTGGAATGAAAATGAACAGTCACATTATTCTGATAGAGGGGAAACCAGTACCAGTAAAATCTTGACGCCCAAAGGACATGTGAAGGATTTCAATCGGGACTTCAAATATAATGCAACTTACCCTCATTGCGCTAAACTGTTGGAGTGGTTCGGTGATCACACAAGGGGCCCTTCAGTGAAAATCCCGTTACCACCATCTCTATCTAGCGATGGGAATTGGATAGGATTGGCTCTATATGCACGTTTTTCAGACCTCGAGAATCAAACTACCTCCAAAGACAAAGTGAATCCAGAAATTGTTGAGCTTGTTTGTCATTTGGAAACTGAGAACGGTAGTTTTAAACATCTTCACCACTATCAACCAACCTATGAAGAATTCAAGCGGTTATGTCCTACAGAATTCATTTGGCTATCTTACATACCACGTCAGGGGTATCTAGATCAGTTAAATGAGTGTGACCTCTTGGAGGCTTCATTTGCTAGCGAAAGCCGAGGGTTGTTTGCTGAAGTGTGTGTTCTCCGTCTTGTCTACCAGCATAATGAGCAAGAGTTTAAGGATCTGTGTATCTCCATGAACTCGTTGCTGGACAAAAGATCAGGAAAGTTGGAAGAACAAGAGGCTCCCAAGAAGGGTAAACAAGTTCTGGAACACCCTGAACCTGAGATTGTATGGGGATCTAATGCAGAGTGGAATCTGGAGATCTGCGACGACCCAAAAACGAGACGTCGAACAATATCTTCTTTCTCGTCTAAGTCAAATAAGATTATCCAAAGGTTGTTGTTGGGTTGCCTAAAATACACCGGCACTCTCTCTCTCTCACCTTTATCGGGTATAATCTTTAAGTTGTTGCTCTATGTTCAAGTCGATCAATCAGCAGCTGTCAAGTCAGGATTTGGCAATGAAGATGAATCCCAACTGCTAACAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 LRR_8 NB-ARC TIR

Protein Analysis

1286

Amino Acids

147.74

Weight (kDa)

5.39

Isoelectric Point (pI)

43.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000307)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g16600 FvH4_1g16610 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16621 FvH4_1g16630 FvH4_1g16640 FvH4_1g16640 FvH4_1g16650 FvH4_1g16650 FvH4_3g27631 FvH4_4g11392 FvH4_4g11542
prunus_persica Prupe.4G224500_v2.0.a1 Prupe.4G226900_v2.0.a1 Prupe.4G227000_v2.0.a1
pyrus_communis pycom11g18180 pycom11g18210 pycom11g18230 pycom11g18270 pycom11g18350 pycom11g18360 pycom11g18370
rosa_chinensis RchiOBHm_Chr2g0106511 RchiOBHm_Chr2g0106541 RchiOBHm_Chr2g0106551 RchiOBHm_Chr2g0106571 RchiOBHm_Chr2g0124621 RchiOBHm_Chr6g0251591 RchiOBHm_Chr6g0251631 RchiOBHm_Chr6g0251641
rosa_laevigata RLG00000015443 RLG00000015444 RLG00000015458 RLG00000017510 RLG00000017511 RLG00000017512 RLG00000017515 RLG00000017516 RLG00000017517 RLG00000018809 RLG00000020934 RLG00000020935 RLG00000034092
rosa_multiflora Rmu_co8285777.1_g000001 Rmu_sc0000762.1_g000001 Rmu_sc0001872.1_g000006 Rmu_sc0005255.1_g000019 Rmu_sc0005597.1_g000006 Rmu_sc0012104.1_g000001 Rmu_sc0017105.1_g000011 Rmu_sc0022904.1_g000001 Rmu_ssc0000135.1_g000049 Rmu_ssc0000213.1_g000047
rosa_roxburghii Rroxscaffold_2G00092830 Rroxscaffold_2G00119790 Rroxscaffold_2G00137010 Rroxscaffold_2G00137030 Rroxscaffold_2G00137070 Rroxscaffold_7G00216560
rosa_rugosa Rorug02G0136100 Rorug02G0136200 Rorug02G0136300 Rorug02G0136400 Rorug02G0251800 Rorug02G0251800 Rorug02G0455500 Rorug02G0455600 Rorug02G0455700 Rorug05G0195300
rosa_samantha Rh2AG187400 Rh2AG187500 Rh2AG187600 Rh2AG310500 Rh2BG198200 Rh2BG198300 Rh2BG198400 Rh2BG198600 Rh2BG318900 Rh2BG534300 Rh2CG192400 Rh2CG192500 Rh2CG192600 Rh2CG297500 Rh2DG193500 Rh2DG193600 Rh2DG193800 Rh2DG334200 Rh2DG543100 Rh5AG280400 Rh5BG285800 Rh5BG285900 Rh5CG317900 Rh5CG318000 Rh5DG294600 Rh5DG294700 Rh6AG012200 Rh6AG012700 Rh6BG011200 Rh6BG011700
rosa_wichuraiana Rw0G009380 Rw2G014610 Rw2G014630 Rw2G014640 Rw2G014680 Rw2G025120 Rw2G043000 Rw5G026490 Rw6G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2901
AarI CACCTGC 1 cut(s) 51
AatII GACGTC 1 cut(s) 3658
Acc36I ACCTGC 1 cut(s) 51
AccB1I GGYRCC 1 cut(s) 577
AccI GTMKAC 5 cut(s) 376, 520, 1119, 1398, 3459
AccIII TCCGGA 1 cut(s) 1888
AciI CCGC 4 cut(s) 332, 973, 2861, 3313
AclI AACGTT 1 cut(s) 2724
AclWI GGATC 6 cut(s) 125, 1434, 1999, 2339, 3495, 3613
AcoI YGGCCR 1 cut(s) 2706
AcuI CTGAAG 9 cut(s) 17, 372, 747, 1116, 1395, 2340, 2435, 3087, 3456
AcyI GRCGYC 2 cut(s) 2996, 3655
AfaI GTAC 7 cut(s) 238, 341, 1156, 1569, 2851, 2877, 2980
AflIII ACRYGT 4 cut(s) 310, 1228, 2377, 3007
AjiI CACGTC 4 cut(s) 1016, 1592, 1666, 3356
AjnI CCWGG 6 cut(s) 297, 627, 2560, 2591, 2703, 2911
AjuI GAANNNNNNNTTGG 4 cut(s) 1587, 1619, 2151, 2183
AloI GAACNNNNNNTCC 2 cut(s) 1924, 1956
Alw21I GWGCWC 3 cut(s) 832, 1293, 2027
Alw26I GTCTC 5 cut(s) 130, 397, 1112, 2384, 3646
Alw44I GTGCAC 2 cut(s) 828, 2023
AlwI GGATC 6 cut(s) 125, 1434, 1999, 2339, 3495, 3613
AlwNI CAGNNNCTG 3 cut(s) 43, 1279, 3809
Ama87I CYCGRG 4 cut(s) 1258, 1537, 2438, 3185
Aor13HI TCCGGA 1 cut(s) 1888
AoxI GGCC 5 cut(s) 543, 1606, 2466, 2706, 3097
ApaI GGGCCC 1 cut(s) 3101
ApaLI GTGCAC 2 cut(s) 828, 2023
ApeKI GCWGC 5 cut(s) 37, 46, 1279, 2741, 3806
Asp700I GAANNNNTTC 5 cut(s) 27, 936, 1770, 2234, 3017
AspLEI GCGC 4 cut(s) 716, 1922, 2660, 3062
AspS9I GGNCC 5 cut(s) 758, 1580, 2466, 3097, 3098
AsuC2I CCSGG 1 cut(s) 2774
AsuHPI GGTGA 6 cut(s) 749, 932, 2935, 3095, 3272, 3741
AsuII TTCGAA 3 cut(s) 510, 930, 1957
AsuNHI GCTAGC 2 cut(s) 1349, 3410
AvaI CYCGRG 4 cut(s) 1258, 1537, 2438, 3185
AvaII GGWCC 2 cut(s) 758, 1580
BaeGI GKGCMC 3 cut(s) 832, 2027, 3101
BalI TGGCCA 1 cut(s) 2708
BanI GGYRCC 1 cut(s) 577
BanII GRGCYC 1 cut(s) 3101
BarI GAAGNNNNNNTAC 4 cut(s) 88, 120, 745, 777
BauI CACGAG 3 cut(s) 845, 1875, 2675
BbsI GAAGAC 3 cut(s) 96, 2004, 2227
Bbv12I GWGCWC 3 cut(s) 832, 1293, 2027
BbvI GCAGC 5 cut(s) 49, 58, 1266, 2753, 3818
BceAI ACGGC 1 cut(s) 1956
BciT130I CCWGG 6 cut(s) 299, 629, 2562, 2593, 2705, 2913
BclI TGATCA 6 cut(s) 739, 1702, 2110, 2182, 2604, 3085
BcnI CCSGG 1 cut(s) 2774
BcoDI GTCTC 5 cut(s) 130, 397, 1112, 2384, 3646
BfaI CTAG 8 cut(s) 1028, 1307, 1350, 1514, 2892, 3135, 3368, 3411
BfmI CTRYAG 8 cut(s) 44, 108, 641, 984, 1271, 1550, 2257, 3324
BfuAI ACCTGC 1 cut(s) 51
BglII AGATCT 5 cut(s) 409, 1184, 1267, 2261, 3630
BisI GCNGC 6 cut(s) 38, 47, 332, 1280, 2742, 3807
BlpI GCTNAGC 1 cut(s) 891
BlsI GCNGC 6 cut(s) 39, 48, 333, 1281, 2743, 3808
BmcAI AGTACT 2 cut(s) 341, 1569
Bme1390I CCNGG 7 cut(s) 299, 629, 2562, 2593, 2705, 2774, 2913
Bme18I GGWCC 2 cut(s) 758, 1580
BmeT110I CYCGRG 4 cut(s) 1258, 1537, 2438, 3185
BmgBI CACGTC 4 cut(s) 1016, 1592, 1666, 3356
BmgT120I GGNCC 5 cut(s) 758, 1580, 2466, 3097, 3098
BmrFI CCNGG 7 cut(s) 299, 629, 2562, 2593, 2705, 2774, 2913
BmsI GCATC 5 cut(s) 423, 2377, 2689, 2753, 2872
BmtI GCTAGC 2 cut(s) 1353, 3414
BpiI GAAGAC 3 cut(s) 96, 2004, 2227
BpmI CTGGAG 4 cut(s) 746, 1926, 2117, 3647
Bpu10I CCTNAGC 1 cut(s) 2411
Bpu1102I GCTNAGC 1 cut(s) 891
Bpu14I TTCGAA 3 cut(s) 510, 930, 1957
BpuEI CTTGAG 2 cut(s) 401, 953
BpuMI CCSGG 1 cut(s) 2774
BsaAI YACGTR 1 cut(s) 2879
BsaBI GATNNNNATC 4 cut(s) 675, 744, 2343, 3021
BsaHI GRCGYC 2 cut(s) 2996, 3655
BsaI GGTCTC 2 cut(s) 397, 1112
BsaJI CCNNGG 9 cut(s) 253, 546, 628, 1081, 1360, 2591, 2772, 2911, 3421
BsaWI WCCGGW 2 cut(s) 563, 1888
BsaXI ACNNNNNCTCC 2 cut(s) 1924, 1954
Bse118I RCCGGY 2 cut(s) 2353, 3731
Bse1I ACTGG 2 cut(s) 2976, 2982
Bse3DI GCAATG 4 cut(s) 709, 2444, 3055, 3835
Bse8I GATNNNNATC 4 cut(s) 675, 744, 2343, 3021
BseAI TCCGGA 1 cut(s) 1888
BseBI CCWGG 6 cut(s) 299, 629, 2562, 2593, 2705, 2913
BseDI CCNNGG 9 cut(s) 253, 546, 628, 1081, 1360, 2591, 2772, 2911, 3421
BseGI GGATG 8 cut(s) 25, 438, 1817, 2067, 2570, 2646, 2680, 2755
BseJI GATNNNNATC 4 cut(s) 675, 744, 2343, 3021
BseMI GCAATG 4 cut(s) 709, 2444, 3055, 3835
BseNI ACTGG 2 cut(s) 2976, 2982
BseSI GKGCMC 3 cut(s) 832, 2027, 3101
BseXI GCAGC 5 cut(s) 49, 58, 1266, 2753, 3818
BshFI GGCC 5 cut(s) 545, 1608, 2468, 2708, 3099
BshNI GGYRCC 1 cut(s) 577
BsiHKAI GWGCWC 3 cut(s) 832, 1293, 2027
BsiHKCI CYCGRG 4 cut(s) 1258, 1537, 2438, 3185
BsiSI CCGG 5 cut(s) 564, 1889, 2354, 2774, 3732
BslFI GGGAC 5 cut(s) 695, 771, 1593, 1676, 3041
BsmAI GTCTC 5 cut(s) 130, 397, 1112, 2384, 3646
BsmBI CGTCTC 1 cut(s) 3646
BsmFI GGGAC 5 cut(s) 695, 771, 1593, 1676, 3041
BsmI GAATGC 1 cut(s) 2592
BsnI GGCC 5 cut(s) 545, 1608, 2468, 2708, 3099
Bso31I GGTCTC 2 cut(s) 397, 1112
BsoBI CYCGRG 4 cut(s) 1258, 1537, 2438, 3185
Bsp119I TTCGAA 3 cut(s) 510, 930, 1957
Bsp120I GGGCCC 1 cut(s) 3097
Bsp1286I GDGCHC 4 cut(s) 832, 1293, 2027, 3101
Bsp13I TCCGGA 1 cut(s) 1888
Bsp1720I GCTNAGC 1 cut(s) 891
BspACI CCGC 4 cut(s) 332, 973, 2861, 3313
BspANI GGCC 5 cut(s) 545, 1608, 2468, 2708, 3099
BspEI TCCGGA 1 cut(s) 1888
BspHI TCATGA 1 cut(s) 1161
BspMAI CTGCAG 1 cut(s) 48
BspMI ACCTGC 1 cut(s) 51
BspOI GCTAGC 2 cut(s) 1353, 3414
BspPI GGATC 6 cut(s) 125, 1434, 1999, 2339, 3495, 3613
BspT104I TTCGAA 3 cut(s) 510, 930, 1957
BspT107I GGYRCC 1 cut(s) 577
BspTNI GGTCTC 2 cut(s) 397, 1112
BsrDI GCAATG 4 cut(s) 709, 2444, 3055, 3835
BsrFI RCCGGY 2 cut(s) 2353, 3731
BsrI ACTGG 2 cut(s) 2976, 2982
BssAI RCCGGY 2 cut(s) 2353, 3731
BssECI CCNNGG 9 cut(s) 253, 546, 628, 1081, 1360, 2591, 2772, 2911, 3421
BssNI GRCGYC 2 cut(s) 2996, 3655
BssSI CACGAG 3 cut(s) 845, 1875, 2675
BssT1I CCWWGG 2 cut(s) 253, 546
Bst2BI CACGAG 3 cut(s) 845, 1875, 2675
Bst2UI CCWGG 6 cut(s) 299, 629, 2562, 2593, 2705, 2913
BstACI GRCGYC 2 cut(s) 2996, 3655
BstAPI GCANNNNNTGC 1 cut(s) 43
BstBAI YACGTR 1 cut(s) 2879
BstBI TTCGAA 3 cut(s) 510, 930, 1957
BstC8I GCNNGC 3 cut(s) 1072, 1351, 3412
BstENI CCTNNNNNAGG 3 cut(s) 1055, 1334, 3395
BstF5I GGATG 8 cut(s) 25, 438, 1817, 2067, 2570, 2646, 2680, 2755
BstHHI GCGC 4 cut(s) 716, 1922, 2660, 3062
BstMAI GTCTC 5 cut(s) 130, 397, 1112, 2384, 3646
BstNI CCWGG 6 cut(s) 299, 629, 2562, 2593, 2705, 2913
BstNSI RCATGY 6 cut(s) 314, 625, 1255, 1534, 2381, 3011
BstSCI CCNGG 7 cut(s) 297, 627, 2560, 2591, 2703, 2772, 2911
BstSFI CTRYAG 8 cut(s) 44, 108, 641, 984, 1271, 1550, 2257, 3324
BstSLI GKGCMC 3 cut(s) 832, 2027, 3101
BstV1I GCAGC 5 cut(s) 49, 58, 1266, 2753, 3818
BstV2I GAAGAC 3 cut(s) 96, 2004, 2227
BstX2I RGATCY 9 cut(s) 409, 1184, 1267, 1426, 2261, 2344, 3487, 3605, 3630
BstYI RGATCY 9 cut(s) 409, 1184, 1267, 1426, 2261, 2344, 3487, 3605, 3630
BsuRI GGCC 5 cut(s) 545, 1608, 2468, 2708, 3099
BtgZI GCGATG 1 cut(s) 3153
BtrI CACGTC 4 cut(s) 1016, 1592, 1666, 3356
BtsCI GGATG 8 cut(s) 25, 438, 1817, 2067, 2570, 2646, 2680, 2755
BtsIMutI CAGTG 8 cut(s) 771, 928, 1293, 1670, 2154, 2193, 2482, 3111
BveI ACCTGC 1 cut(s) 51
Cac8I GCNNGC 3 cut(s) 1072, 1351, 3412
CaiI CAGNNNCTG 3 cut(s) 43, 1279, 3809
CciI TCATGA 1 cut(s) 1161
CfoI GCGC 4 cut(s) 716, 1922, 2660, 3062
Cfr10I RCCGGY 2 cut(s) 2353, 3731
Cfr13I GGNCC 5 cut(s) 758, 1580, 2466, 3097, 3098
CseI GACGC 1 cut(s) 3004
Csp6I GTAC 7 cut(s) 237, 340, 1155, 1568, 2850, 2876, 2979
CspCI CAANNNNNGTGG 2 cut(s) 79, 114
CviQI GTAC 7 cut(s) 237, 340, 1155, 1568, 2850, 2876, 2979
DraI TTTAAA 4 cut(s) 244, 280, 2505, 3271
EaeI YGGCCR 1 cut(s) 2706
Eco130I CCWWGG 2 cut(s) 253, 546
Eco24I GRGCYC 1 cut(s) 3101
Eco31I GGTCTC 2 cut(s) 397, 1112
Eco47I GGWCC 2 cut(s) 758, 1580
Eco57I CTGAAG 9 cut(s) 17, 372, 747, 1116, 1395, 2340, 2435, 3087, 3456
Eco88I CYCGRG 4 cut(s) 1258, 1537, 2438, 3185
EcoNI CCTNNNNNAGG 3 cut(s) 1055, 1334, 3395
EcoO109I RGGNCCY 3 cut(s) 758, 3097, 3098
EcoRI GAATTC 3 cut(s) 2143, 3305, 3329
EcoRII CCWGG 6 cut(s) 297, 627, 2560, 2591, 2703, 2911
EcoT14I CCWWGG 2 cut(s) 253, 546
EcoT38I GRGCYC 1 cut(s) 3101
ErhI CCWWGG 2 cut(s) 253, 546
Esp3I CGTCTC 1 cut(s) 3646
FalI AAGNNNNNCTT 6 cut(s) 472, 504, 2313, 2345, 3085, 3117
FaqI GGGAC 5 cut(s) 695, 771, 1593, 1676, 3041
FauNDI CATATG 1 cut(s) 1585
FbaI TGATCA 6 cut(s) 739, 1702, 2110, 2182, 2604, 3085
FblI GTMKAC 5 cut(s) 376, 520, 1119, 1398, 3459
Fnu4HI GCNGC 6 cut(s) 38, 47, 332, 1280, 2742, 3807
FokI GGATG 8 cut(s) 32, 445, 1804, 2054, 2577, 2653, 2667, 2762
FriOI GRGCYC 1 cut(s) 3101
Fsp4HI GCNGC 6 cut(s) 38, 47, 332, 1280, 2742, 3807
FspBI CTAG 8 cut(s) 1028, 1307, 1350, 1514, 2892, 3135, 3368, 3411
GlaI GCGC 4 cut(s) 715, 1921, 2659, 3061
GluI GCNGC 6 cut(s) 38, 47, 332, 1280, 2742, 3807
GsuI CTGGAG 4 cut(s) 746, 1926, 2117, 3647
HaeIII GGCC 5 cut(s) 545, 1608, 2468, 2708, 3099
HapII CCGG 5 cut(s) 564, 1889, 2354, 2774, 3732
HgaI GACGC 1 cut(s) 3004
HhaI GCGC 4 cut(s) 716, 1922, 2660, 3062
Hin1I GRCGYC 2 cut(s) 2996, 3655
Hin6I GCGC 4 cut(s) 714, 1920, 2658, 3060
HinP1I GCGC 4 cut(s) 714, 1920, 2658, 3060
HincII GTYRAC 1 cut(s) 377
HindII GTYRAC 1 cut(s) 377
HpaII CCGG 5 cut(s) 564, 1889, 2354, 2774, 3732
HphI GGTGA 6 cut(s) 749, 932, 2935, 3095, 3272, 3741
Hpy99I CGWCG 2 cut(s) 3641, 3660
Hsp92I GRCGYC 2 cut(s) 2996, 3655
HspAI GCGC 4 cut(s) 714, 1920, 2658, 3060
Kpn2I TCCGGA 1 cut(s) 1888
Ksp22I TGATCA 6 cut(s) 739, 1702, 2110, 2182, 2604, 3085
LmnI GCTCC 6 cut(s) 566, 1216, 1495, 1891, 2406, 3556
Lsp1109I GCAGC 5 cut(s) 49, 58, 1266, 2753, 3818
LweI GCATC 5 cut(s) 423, 2377, 2689, 2753, 2872
MaeI CTAG 8 cut(s) 1028, 1307, 1350, 1514, 2892, 3135, 3368, 3411
MflI RGATCY 9 cut(s) 409, 1184, 1267, 1426, 2261, 2344, 3487, 3605, 3630
MhlI GDGCHC 4 cut(s) 832, 1293, 2027, 3101
MlsI TGGCCA 1 cut(s) 2708
MluNI TGGCCA 1 cut(s) 2708
MlyI GAGTC 5 cut(s) 2303, 2386, 2391, 2450, 2773
MmeI TCCRAC 7 cut(s) 1176, 1455, 2095, 2277, 2296, 3051, 3516
Mox20I TGGCCA 1 cut(s) 2708
MroI TCCGGA 1 cut(s) 1888
MroXI GAANNNNTTC 5 cut(s) 27, 936, 1770, 2234, 3017
MscI TGGCCA 1 cut(s) 2708
MslI CAYNNNNRTG 5 cut(s) 1653, 2376, 2620, 2685, 2817
Msp20I TGGCCA 1 cut(s) 2708
MspA1I CMGCKG 1 cut(s) 3809
MspI CCGG 5 cut(s) 564, 1889, 2354, 2774, 3732
MspR9I CCNGG 7 cut(s) 299, 629, 2562, 2593, 2705, 2774, 2913
Mva1269I GAATGC 1 cut(s) 2592
MvaI CCWGG 6 cut(s) 299, 629, 2562, 2593, 2705, 2913
NciI CCSGG 1 cut(s) 2774
NdeI CATATG 1 cut(s) 1585
NheI GCTAGC 2 cut(s) 1349, 3410
NmeAIII GCCGAG 3 cut(s) 1106, 1385, 3446
NmuCI GTSAC 8 cut(s) 86, 194, 1046, 1325, 1907, 2923, 2949, 3386
NspI RCATGY 6 cut(s) 314, 625, 1255, 1534, 2381, 3011
NspV TTCGAA 3 cut(s) 510, 930, 1957
PaeR7I CTCGAG 2 cut(s) 2438, 3185
PagI TCATGA 1 cut(s) 1161
PaqCI CACCTGC 1 cut(s) 51
PciI ACATGT 3 cut(s) 310, 2377, 3007
PcsI WCGNNNNNNNCGW 1 cut(s) 2579
PctI GAATGC 1 cut(s) 2592
PdmI GAANNNNTTC 5 cut(s) 27, 936, 1770, 2234, 3017
PfoI TCCNGGA 1 cut(s) 2560
PkrI GCNGC 6 cut(s) 39, 48, 333, 1281, 2743, 3808
PleI GAGTC 5 cut(s) 2302, 2386, 2391, 2449, 2772
PpsI GAGTC 5 cut(s) 2302, 2386, 2391, 2449, 2772
Ppu21I YACGTR 1 cut(s) 2879
PpuMI RGGWCCY 1 cut(s) 758
PscI ACATGT 3 cut(s) 310, 2377, 3007
PsiI TTATAA 1 cut(s) 2901
Psp1406I AACGTT 1 cut(s) 2724
Psp5II RGGWCCY 1 cut(s) 758
Psp6I CCWGG 6 cut(s) 297, 627, 2560, 2591, 2703, 2911
PspGI CCWGG 6 cut(s) 297, 627, 2560, 2591, 2703, 2911
PspOMI GGGCCC 1 cut(s) 3097
PspPI GGNCC 5 cut(s) 758, 1580, 2466, 3097, 3098
PspPPI RGGWCCY 1 cut(s) 758
PstI CTGCAG 1 cut(s) 48
PstNI CAGNNNCTG 3 cut(s) 43, 1279, 3809
PsuI RGATCY 9 cut(s) 409, 1184, 1267, 1426, 2261, 2344, 3487, 3605, 3630
PvuII CAGCTG 1 cut(s) 3809
RsaI GTAC 7 cut(s) 238, 341, 1156, 1569, 2851, 2877, 2980
RsaNI GTAC 7 cut(s) 237, 340, 1155, 1568, 2850, 2876, 2979
RseI CAYNNNNRTG 5 cut(s) 1653, 2376, 2620, 2685, 2817
SalI GTCGAC 1 cut(s) 375
SatI GCNGC 6 cut(s) 38, 47, 332, 1280, 2742, 3807
Sau96I GGNCC 5 cut(s) 758, 1580, 2466, 3097, 3098
ScaI AGTACT 2 cut(s) 341, 1569
SchI GAGTC 5 cut(s) 2303, 2386, 2391, 2450, 2773
ScrFI CCNGG 7 cut(s) 299, 629, 2562, 2593, 2705, 2774, 2913
SduI GDGCHC 4 cut(s) 832, 1293, 2027, 3101
SfaNI GCATC 5 cut(s) 423, 2377, 2689, 2753, 2872
SfcI CTRYAG 8 cut(s) 44, 108, 641, 984, 1271, 1550, 2257, 3324
Sfr274I CTCGAG 2 cut(s) 2438, 3185
SfuI TTCGAA 3 cut(s) 510, 930, 1957
SinI GGWCC 2 cut(s) 758, 1580
SlaI CTCGAG 2 cut(s) 2438, 3185
SmiMI CAYNNNNRTG 5 cut(s) 1653, 2376, 2620, 2685, 2817
SmlI CTYRAG 4 cut(s) 380, 968, 2438, 3185
SmoI CTYRAG 4 cut(s) 380, 968, 2438, 3185
SsiI CCGC 4 cut(s) 332, 973, 2861, 3313
SspI AATATT 1 cut(s) 2247
SspMI CTAG 8 cut(s) 1028, 1307, 1350, 1514, 2892, 3135, 3368, 3411
StyD4I CCNGG 7 cut(s) 297, 627, 2560, 2591, 2703, 2772, 2911
StyI CCWWGG 2 cut(s) 253, 546
TatI WGTACW 3 cut(s) 236, 339, 1567
TauI GCSGC 1 cut(s) 334
TscAI CASTG 8 cut(s) 771, 928, 1293, 1677, 2154, 2200, 2482, 3111
TseFI GTSAC 8 cut(s) 86, 194, 1046, 1325, 1907, 2923, 2949, 3386
TseI GCWGC 5 cut(s) 37, 46, 1279, 2741, 3806
Tsp45I GTSAC 8 cut(s) 86, 194, 1046, 1325, 1907, 2923, 2949, 3386
TspGWI ACGGA 8 cut(s) 518, 1100, 1379, 1810, 1997, 2236, 2499, 3440
TspRI CASTG 8 cut(s) 771, 928, 1293, 1677, 2154, 2200, 2482, 3111
VneI GTGCAC 2 cut(s) 828, 2023
VpaK11BI GGWCC 2 cut(s) 758, 1580
XagI CCTNNNNNAGG 3 cut(s) 1055, 1334, 3395
XbaI TCTAGA 4 cut(s) 1027, 1306, 1513, 3367
XceI RCATGY 6 cut(s) 314, 625, 1255, 1534, 2381, 3011
XcmI CCANNNNNNNNNTGG 2 cut(s) 2078, 2279
XhoI CTCGAG 2 cut(s) 2438, 3185
XmiI GTMKAC 5 cut(s) 376, 520, 1119, 1398, 3459
XmnI GAANNNNTTC 5 cut(s) 27, 936, 1770, 2234, 3017
XspI CTAG 8 cut(s) 1028, 1307, 1350, 1514, 2892, 3135, 3368, 3411
ZraI GACGTC 1 cut(s) 3656
ZrmI AGTACT 2 cut(s) 341, 1569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.