Prupe.4G224500_v2.0.a1

TMV resistance protein N-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
14124454 .. 14130784
6331 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G224500.1

Sequence Viewer

Length: 2625 bp
ATGTTCACAATCCTCCTCCTCCTCCTTCCTTGTATTCTTCTTCACCTTGTTAATTTTCTCCTAGGGCGTGCTGAGTTTCCTTCTTCAACCCTTGAACTGAAGCATGAGGAAGCTCCCCAAGCAGTGCCTTCATCTTCAATCCCTGAAACATTGGACTTTGATGTCTTCCTCAGTTTTAGGGGGGAAGACACCCGCAATAGTTTTACGGACCATTTATATCACGGTTTGAATCTGAAAGGAATCGATACATTCATGGATGAAGAGAGGCTTGAGAGGGGAAAACCCATCGCACCAAAACTCCTGAAAGCAATTGAACACTCTAAGTTTGCAGTTGTCGTTCTTTCAGAAGACTACGCTTCTTCAACTTGGTGTTTGGATGAACTTGCCCATATTGTTCAGTGCATGAAAGGGGGGAGACTAAAAGTGTTTCCGGTCTTCTACCACATCGAGGCATCCACGGTAAGAAAGCAAACAGGAAATTATGGAAAAGCCTTTGCTAAGCATGACGAAAATTTTAAGAAGGAAAAAAGGAAGGTGAAAAAGTGGAGGAGAGCTCTGACGAGGGTAGCCGAAGTTGCCGGATGGGATTTGAAAAATAGGAAAGAATCAGAAGTTATTGAGGAAATAGCTAACAGGATTTCAAATATATTGAACGACGAACTCTCAAGTTCTAACAACGATTTAATTGGAATGGATTCTCGTATTAAGAAAATGGAGGAGTACTTGGCTCTTTGCAGGTCGGATGATGTTCGCACCATAGGGATTTGGGGGTTCGGGGGCATTGGTAAGACAACTCTCGCAAACGAAGTTTTTAAGAAGATCAGGAACCAATTTGATGCTAAATGCTTCGTTTCCTCTGTTAGAGAGGAATCCACAAAAGTAAATGGTCTAGTTGGCATGCAAAAATCTCTCTTTGCAACCTTGCTGCACTGCAATGAAGATATACAAAATGCTGACTTGGGGATCCAATTGTTACGTACTAGACTAAGGAATAAAAGGGTGCTTATTGTTCTGGATGATGTTGATAAACTAGATCAGATAAAGGCTTTAGCAGATGAATCTTGGTTGGGTCCAGGGAGTCGAGTCATTATAACAACTAGGGAGAAGCATGAGTTGGATTCATGTGGACTACTTGCAGATAGTATATACGAGGTTGACAAGCTGAAGATTGGTGAAGATTCTCAGCTCTTTTGTCGAAAAGCCTTCAAGGAAAACGATGCTCCACATGATTATAAAGAGTTGTCCAAAAAATATGTAGAATATGCTGGTGGCATTCCTTTAGCTCTTATAGTTCTGGGATCATACTTGAGGGGAAAAAATGTAATAGAATGGTCAGAAGCATTTGATAGACTTGATGAAGATCCTGAAGAAGACATTATGAATGTGCTTAAAATAAGTTTTGACGCATTAAAGGGCACAGTGAAACAAATCTTTCTGGACATTGCATGCTTCTTTAATGGAGAGAATCAAGTTCGTGTAAAGAAGATATTAGAAAGTTGCCGGTTTTATCCTACAAGTGGTATGCGTGACCTTCTTGATAAAGCCCTAATTAAAATTAACGAAAGAAATGAACTGTGGATGCATGATTTACTTCGGAAAATGGGTCAGGACATTGTTCATAGACAATTTCCTAATGAGCCTGGAAAGCGCAGCAGGTTGTGGATTAATGAGAATGCCTACAAACGCAACAGGTCATGGCATGATAAAGTACTTGCAGAGAATACGGGAACAACTGCTGTCGAAGGCATATTCCTAATCTTGCTGGCAAAGGAAGAGATACAGTTGGATGCTGACCCGTTCGCTAAAATGTGCAACCTAAGATTGTTGAAGATTTGTAATGTCAACTTTTCTAGATGCCCTGAGTATTTCTCCAAAGAGTTACGGCTTCTGGAATGGCACGAATATCCTTTAGAATCTCTGCCATCAAGTTTTAAACCATGTCAGCTTGTTGAACTCAAGATGCCTAACAGTCGCATTACCCAACTATGGCATGAAAGTTGTACCATGATGGAAAACTTAGTACAAATGGATCTTTCCAACTGCAAATTCTTGATCAAGACCCCAGACTTCAGAAAGGTCCCAAATCTTGAGAGGTTGATTCTTGAAGGTTGTGAAAAATTATCAGAGGTTCACGCAACAATTGGGGATCTCCAACGTCTCGTTGTATTGAATATGGGACGTTGTGAAAGTCTAGAGAGCCTTCCCCACTCCATCAGCTTAAAATCTCTTAAAACCTTTAATCTTTCTGGTTGTTCAAAACTCAAAGAGTTTCCAGAGATTGTGGGAAACATGGAAGCTTTGTCAGAACTTTTTTTAGATGGAACGGCTATAAGGACGCTGCCGGCATCAATCCAGCAATTGAGGGGCCTTTTTTGGATAAATTTAAGTCGTTGCAAGAACCTTACGTGTCTTCCTATGGCCATTTGTAGTATGACATCTTTGAGATATATATATATGTCTGGCTGGCTGTTCGTGCCTTGTAAAACTGCTACAACAGAAGTGCCAGTCGAATCCTCTGTATCCGCTGAACATAAAGATGAGCTGGCTGAATCCTCTGTATCCACTGAGCATAGAGAAATGGAATCCTCTGTATTGTTCAATGAGCTGGCAACGGAAGAGATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

875

Amino Acids

99.89

Weight (kDa)

6.2

Isoelectric Point (pI)

42.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000307)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g16600 FvH4_1g16610 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16621 FvH4_1g16630 FvH4_1g16640 FvH4_1g16640 FvH4_1g16650 FvH4_1g16650 FvH4_3g27631 FvH4_4g11392 FvH4_4g11542
prunus_persica Prupe.4G224500_v2.0.a1 Prupe.4G226900_v2.0.a1 Prupe.4G227000_v2.0.a1
pyrus_communis pycom11g18180 pycom11g18210 pycom11g18230 pycom11g18270 pycom11g18350 pycom11g18360 pycom11g18370
rosa_chinensis RchiOBHm_Chr2g0106511 RchiOBHm_Chr2g0106541 RchiOBHm_Chr2g0106551 RchiOBHm_Chr2g0106571 RchiOBHm_Chr2g0124621 RchiOBHm_Chr6g0251591 RchiOBHm_Chr6g0251631 RchiOBHm_Chr6g0251641
rosa_laevigata RLG00000015443 RLG00000015444 RLG00000015458 RLG00000017510 RLG00000017511 RLG00000017512 RLG00000017515 RLG00000017516 RLG00000017517 RLG00000018809 RLG00000020934 RLG00000020935 RLG00000034092
rosa_multiflora Rmu_co8285777.1_g000001 Rmu_sc0000762.1_g000001 Rmu_sc0001872.1_g000006 Rmu_sc0005255.1_g000019 Rmu_sc0005597.1_g000006 Rmu_sc0012104.1_g000001 Rmu_sc0017105.1_g000011 Rmu_sc0022904.1_g000001 Rmu_ssc0000135.1_g000049 Rmu_ssc0000213.1_g000047
rosa_roxburghii Rroxscaffold_2G00092830 Rroxscaffold_2G00119790 Rroxscaffold_2G00137010 Rroxscaffold_2G00137030 Rroxscaffold_2G00137070 Rroxscaffold_7G00216560
rosa_rugosa Rorug02G0136100 Rorug02G0136200 Rorug02G0136300 Rorug02G0136400 Rorug02G0251800 Rorug02G0251800 Rorug02G0455500 Rorug02G0455600 Rorug02G0455700 Rorug05G0195300
rosa_samantha Rh2AG187400 Rh2AG187500 Rh2AG187600 Rh2AG310500 Rh2BG198200 Rh2BG198300 Rh2BG198400 Rh2BG198600 Rh2BG318900 Rh2BG534300 Rh2CG192400 Rh2CG192500 Rh2CG192600 Rh2CG297500 Rh2DG193500 Rh2DG193600 Rh2DG193800 Rh2DG334200 Rh2DG543100 Rh5AG280400 Rh5BG285800 Rh5BG285900 Rh5CG317900 Rh5CG318000 Rh5DG294600 Rh5DG294700 Rh6AG012200 Rh6AG012700 Rh6BG011200 Rh6BG011700
rosa_wichuraiana Rw0G009380 Rw2G014610 Rw2G014630 Rw2G014640 Rw2G014680 Rw2G025120 Rw2G043000 Rw5G026490 Rw6G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1091, 1233
AasI GACNNNNNNGTC 1 cut(s) 161
Acc36I ACCTGC 2 cut(s) 726, 1644
AciI CCGC 2 cut(s) 193, 2523
AclWI GGATC 6 cut(s) 958, 971, 1306, 1355, 2037, 2154
AcoI YGGCCR 1 cut(s) 2418
AcsI RAATTY 3 cut(s) 511, 2045, 2380
AcuI CTGAAG 4 cut(s) 119, 1184, 1386, 2053
AfaI GTAC 5 cut(s) 722, 979, 1710, 2002, 2022
AfiI CCNNNNNNNGG 3 cut(s) 448, 1517, 1986
AflIII ACRYGT 1 cut(s) 2405
AjnI CCWGG 2 cut(s) 1072, 1639
AjuI GAANNNNNNNTTGG 4 cut(s) 1097, 1129, 2030, 2062
Alw21I GWGCWC 1 cut(s) 556
Alw26I GTCTC 2 cut(s) 409, 2162
AlwI GGATC 6 cut(s) 958, 971, 1306, 1355, 2037, 2154
AoxI GGCC 2 cut(s) 2365, 2418
ApeKI GCWGC 3 cut(s) 925, 1650, 2338
ApoI RAATTY 3 cut(s) 511, 2045, 2380
AseI ATTAAT 1 cut(s) 1665
Asp700I GAANNNNTTC 1 cut(s) 694
AspA2I CCTAGG 1 cut(s) 61
AspLEI GCGC 1 cut(s) 1650
AspS9I GGNCC 4 cut(s) 208, 1070, 2077, 2365
AsuHPI GGTGA 3 cut(s) 35, 547, 1184
AvaII GGWCC 3 cut(s) 208, 1070, 2077
AvrII CCTAGG 1 cut(s) 61
BaeGI GKGCMC 1 cut(s) 1418
BalI TGGCCA 1 cut(s) 2420
BamHI GGATCC 1 cut(s) 963
BanII GRGCYC 1 cut(s) 556
BbsI GAAGAC 6 cut(s) 157, 192, 354, 427, 1377, 2402
Bbv12I GWGCWC 1 cut(s) 556
BbvI GCAGC 3 cut(s) 912, 1662, 2325
BccI CCATC 6 cut(s) 293, 576, 1930, 2002, 2219, 2312
BceAI ACGGC 2 cut(s) 1898, 2340
BciT130I CCWGG 2 cut(s) 1074, 1641
BciVI GTATCC 2 cut(s) 2530, 2569
BclI TGATCA 1 cut(s) 2052
BcoDI GTCTC 2 cut(s) 409, 2162
BfaI CTAG 7 cut(s) 62, 890, 981, 1031, 1098, 1851, 2192
BfuAI ACCTGC 2 cut(s) 726, 1644
BfuI GTATCC 2 cut(s) 2530, 2569
BisI GCNGC 3 cut(s) 926, 1651, 2339
BlnI CCTAGG 1 cut(s) 61
BlpI GCTNAGC 1 cut(s) 498
BlsI GCNGC 3 cut(s) 927, 1652, 2340
BmcAI AGTACT 2 cut(s) 722, 1710
Bme1390I CCNGG 2 cut(s) 1074, 1641
Bme18I GGWCC 3 cut(s) 208, 1070, 2077
BmgT120I GGNCC 4 cut(s) 208, 1070, 2077, 2365
BmiI GGNNCC 5 cut(s) 827, 965, 1071, 2079, 2366
BmrFI CCNGG 2 cut(s) 1074, 1641
BmsI GCATC 8 cut(s) 461, 826, 1207, 1569, 1777, 1844, 1950, 2354
BpiI GAAGAC 6 cut(s) 157, 192, 354, 427, 1377, 2402
BplI GAGNNNNNCTC 4 cut(s) 538, 570, 1853, 1885
Bpu1102I GCTNAGC 1 cut(s) 498
BpuEI CTTGAG 5 cut(s) 290, 649, 1327, 1940, 2108
Bsa29I ATCGAT 1 cut(s) 243
BsaAI YACGTR 2 cut(s) 977, 2406
BsaBI GATNNNNATC 1 cut(s) 1359
BsaJI CCNNGG 3 cut(s) 61, 456, 1073
BsaWI WCCGGW 1 cut(s) 430
BsaXI ACNNNNNCTCC 2 cut(s) 282, 312
Bsc4I CCNNNNNNNGG 3 cut(s) 448, 1517, 1986
Bse118I RCCGGY 2 cut(s) 1500, 2341
Bse1I ACTGG 1 cut(s) 2504
Bse3DI GCAATG 2 cut(s) 940, 1440
Bse8I GATNNNNATC 1 cut(s) 1359
BseBI CCWGG 2 cut(s) 1074, 1641
BseCI ATCGAT 1 cut(s) 243
BseDI CCNNGG 3 cut(s) 61, 456, 1073
BseGI GGATG 8 cut(s) 262, 382, 452, 587, 748, 1021, 1584, 1792
BseJI GATNNNNATC 1 cut(s) 1359
BseLI CCNNNNNNNGG 3 cut(s) 448, 1517, 1986
BseMI GCAATG 2 cut(s) 940, 1440
BseMII CTCAG 5 cut(s) 63, 184, 1196, 1851, 2556
BseNI ACTGG 1 cut(s) 2504
BseRI GAGGAG 5 cut(s) 5, 8, 11, 562, 731
BseSI GKGCMC 1 cut(s) 1418
BseXI GCAGC 3 cut(s) 912, 1662, 2325
BsgI GTGCAG 1 cut(s) 911
BshFI GGCC 2 cut(s) 2367, 2420
BshVI ATCGAT 1 cut(s) 243
BsiHKAI GWGCWC 1 cut(s) 556
BsiSI CCGG 4 cut(s) 431, 579, 1501, 2342
BslFI GGGAC 2 cut(s) 2063, 2190
BslI CCNNNNNNNGG 3 cut(s) 448, 1517, 1986
BsmAI GTCTC 2 cut(s) 409, 2162
BsmBI CGTCTC 1 cut(s) 2162
BsmFI GGGAC 2 cut(s) 2063, 2190
BsmI GAATGC 2 cut(s) 1272, 1678
BsnI GGCC 2 cut(s) 2367, 2420
Bsp1286I GDGCHC 2 cut(s) 556, 1418
Bsp143I GATC 8 cut(s) 819, 963, 1033, 1298, 1360, 2029, 2052, 2146
Bsp1720I GCTNAGC 1 cut(s) 498
BspACI CCGC 2 cut(s) 193, 2523
BspANI GGCC 2 cut(s) 2367, 2420
BspCNI CTCAG 5 cut(s) 64, 183, 1195, 1852, 2557
BspDI ATCGAT 1 cut(s) 243
BspLI GGNNCC 5 cut(s) 827, 965, 1071, 2079, 2366
BspMI ACCTGC 2 cut(s) 726, 1644
BspPI GGATC 6 cut(s) 958, 971, 1306, 1355, 2037, 2154
BsrDI GCAATG 2 cut(s) 940, 1440
BsrFI RCCGGY 2 cut(s) 1500, 2341
BsrI ACTGG 1 cut(s) 2504
BssAI RCCGGY 2 cut(s) 1500, 2341
BssECI CCNNGG 3 cut(s) 61, 456, 1073
BssMI GATC 8 cut(s) 819, 963, 1033, 1298, 1360, 2029, 2052, 2146
BssT1I CCWWGG 1 cut(s) 61
Bst2UI CCWGG 2 cut(s) 1074, 1641
Bst4CI ACNGT 6 cut(s) 224, 460, 1420, 1575, 1782, 1970
Bst6I CTCTTC 3 cut(s) 255, 1767, 2610
BstBAI YACGTR 2 cut(s) 977, 2406
BstC8I GCNNGC 8 cut(s) 69, 899, 1447, 1764, 2343, 2465, 2544, 2607
BstDSI CCRYGG 1 cut(s) 456
BstF5I GGATG 8 cut(s) 262, 382, 452, 587, 748, 1021, 1584, 1792
BstHHI GCGC 1 cut(s) 1650
BstKTI GATC 8 cut(s) 822, 966, 1036, 1301, 1363, 2032, 2055, 2149
BstMAI GTCTC 2 cut(s) 409, 2162
BstMBI GATC 8 cut(s) 819, 963, 1033, 1298, 1360, 2029, 2052, 2146
BstMWI GCNNNNNNNGC 4 cut(s) 119, 575, 1645, 2473
BstNI CCWGG 2 cut(s) 1074, 1641
BstNSI RCATGY 2 cut(s) 901, 1449
BstSCI CCNGG 2 cut(s) 1072, 1639
BstSLI GKGCMC 1 cut(s) 1418
BstSNI TACGTA 1 cut(s) 977
BstV1I GCAGC 3 cut(s) 912, 1662, 2325
BstV2I GAAGAC 6 cut(s) 157, 192, 354, 427, 1377, 2402
BstX2I RGATCY 4 cut(s) 963, 1360, 2029, 2146
BstYI RGATCY 4 cut(s) 963, 1360, 2029, 2146
Bsu15I ATCGAT 1 cut(s) 243
BsuI GTATCC 2 cut(s) 2530, 2569
BsuRI GGCC 2 cut(s) 2367, 2420
BsuTUI ATCGAT 1 cut(s) 243
BtgI CCRYGG 1 cut(s) 456
BtgZI GCGATG 1 cut(s) 271
BtsCI GGATG 8 cut(s) 262, 382, 452, 587, 748, 1021, 1584, 1792
BtsI GCAGTG 2 cut(s) 129, 928
BtsIMutI CAGTG 5 cut(s) 129, 404, 928, 1425, 2562
BveI ACCTGC 2 cut(s) 726, 1644
Cac8I GCNNGC 8 cut(s) 69, 899, 1447, 1764, 2343, 2465, 2544, 2607
CfoI GCGC 1 cut(s) 1650
Cfr10I RCCGGY 2 cut(s) 1500, 2341
Cfr13I GGNCC 4 cut(s) 208, 1070, 2077, 2365
ClaI ATCGAT 1 cut(s) 243
CseI GACGC 2 cut(s) 1412, 2344
Csp6I GTAC 5 cut(s) 721, 978, 1709, 2001, 2021
CviQI GTAC 5 cut(s) 721, 978, 1709, 2001, 2021
DpnI GATC 8 cut(s) 821, 965, 1035, 1300, 1362, 2031, 2054, 2148
DpnII GATC 8 cut(s) 819, 963, 1033, 1298, 1360, 2029, 2052, 2146
DraI TTTAAA 1 cut(s) 1933
DrdI GACNNNNNNGTC 1 cut(s) 161
DseDI GACNNNNNNGTC 1 cut(s) 161
EaeI YGGCCR 1 cut(s) 2418
Eam1104I CTCTTC 3 cut(s) 255, 1767, 2610
EarI CTCTTC 3 cut(s) 255, 1767, 2610
Ecl136II GAGCTC 1 cut(s) 554
Eco105I TACGTA 1 cut(s) 977
Eco130I CCWWGG 1 cut(s) 61
Eco24I GRGCYC 1 cut(s) 556
Eco47I GGWCC 3 cut(s) 208, 1070, 2077
Eco53kI GAGCTC 1 cut(s) 554
Eco57I CTGAAG 4 cut(s) 119, 1184, 1386, 2053
EcoICRI GAGCTC 1 cut(s) 554
EcoO109I RGGNCCY 2 cut(s) 2077, 2365
EcoRII CCWGG 2 cut(s) 1072, 1639
EcoT14I CCWWGG 1 cut(s) 61
EcoT22I ATGCAT 1 cut(s) 1584
EcoT38I GRGCYC 1 cut(s) 556
ErhI CCWWGG 1 cut(s) 61
Esp3I CGTCTC 1 cut(s) 2162
FalI AAGNNNNNCTT 2 cut(s) 252, 284
FaqI GGGAC 2 cut(s) 2063, 2190
FauI CCCGC 1 cut(s) 200
FbaI TGATCA 1 cut(s) 2052
Fnu4HI GCNGC 3 cut(s) 926, 1651, 2339
FokI GGATG 8 cut(s) 269, 389, 439, 594, 755, 1028, 1591, 1799
FriOI GRGCYC 1 cut(s) 556
Fsp4HI GCNGC 3 cut(s) 926, 1651, 2339
FspBI CTAG 7 cut(s) 62, 890, 981, 1031, 1098, 1851, 2192
GlaI GCGC 1 cut(s) 1649
GluI GCNGC 3 cut(s) 926, 1651, 2339
HaeIII GGCC 2 cut(s) 2367, 2420
HapII CCGG 4 cut(s) 431, 579, 1501, 2342
HgaI GACGC 2 cut(s) 1412, 2344
HhaI GCGC 1 cut(s) 1650
Hin6I GCGC 1 cut(s) 1648
HinP1I GCGC 1 cut(s) 1648
HincII GTYRAC 2 cut(s) 1156, 1843
HindII GTYRAC 2 cut(s) 1156, 1843
HindIII AAGCTT 1 cut(s) 2295
HpaII CCGG 4 cut(s) 431, 579, 1501, 2342
HphI GGTGA 3 cut(s) 35, 547, 1184
Hpy166II GTNNAC 5 cut(s) 6, 1127, 1156, 1843, 2131
Hpy8I GTNNAC 5 cut(s) 6, 1127, 1156, 1843, 2131
Hpy99I CGWCG 1 cut(s) 659
HpyCH4III ACNGT 6 cut(s) 224, 460, 1420, 1575, 1782, 1970
HpyCH4IV ACGT 4 cut(s) 976, 2155, 2179, 2405
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 575, 1645, 2473
HpySE526I ACGT 4 cut(s) 976, 2155, 2179, 2405
HspAI GCGC 1 cut(s) 1648
KroI GCCGGC 1 cut(s) 2341
KroNI GCCGGC 1 cut(s) 2343
Ksp22I TGATCA 1 cut(s) 2052
Kzo9I GATC 8 cut(s) 819, 963, 1033, 1298, 1360, 2029, 2052, 2146
LmnI GCTCC 2 cut(s) 118, 1225
Lsp1109I GCAGC 3 cut(s) 912, 1662, 2325
LweI GCATC 8 cut(s) 461, 826, 1207, 1569, 1777, 1844, 1950, 2354
MaeI CTAG 7 cut(s) 62, 890, 981, 1031, 1098, 1851, 2192
MaeII ACGT 4 cut(s) 976, 2155, 2179, 2405
MaeIII GTNAC 3 cut(s) 972, 1526, 1878
MalI GATC 8 cut(s) 821, 965, 1035, 1300, 1362, 2031, 2054, 2148
MboI GATC 8 cut(s) 819, 963, 1033, 1298, 1360, 2029, 2052, 2146
MfeI CAATTG 4 cut(s) 309, 968, 2139, 2357
MflI RGATCY 4 cut(s) 963, 1360, 2029, 2146
MhlI GDGCHC 2 cut(s) 556, 1418
MlsI TGGCCA 1 cut(s) 2420
MluNI TGGCCA 1 cut(s) 2420
MlyI GAGTC 2 cut(s) 1087, 1092
MmeI TCCRAC 5 cut(s) 720, 1095, 1764, 2061, 2176
Mox20I TGGCCA 1 cut(s) 2420
Mph1103I ATGCAT 1 cut(s) 1584
MroNI GCCGGC 1 cut(s) 2341
MroXI GAANNNNTTC 1 cut(s) 694
MscI TGGCCA 1 cut(s) 2420
MslI CAYNNNNRTG 2 cut(s) 933, 2535
Msp20I TGGCCA 1 cut(s) 2420
MspA1I CMGCKG 1 cut(s) 2525
MspI CCGG 4 cut(s) 431, 579, 1501, 2342
MspR9I CCNGG 2 cut(s) 1074, 1641
MunI CAATTG 4 cut(s) 309, 968, 2139, 2357
Mva1269I GAATGC 2 cut(s) 1272, 1678
MvaI CCWGG 2 cut(s) 1074, 1641
MwoI GCNNNNNNNGC 4 cut(s) 119, 575, 1645, 2473
NaeI GCCGGC 1 cut(s) 2343
NdeII GATC 8 cut(s) 819, 963, 1033, 1298, 1360, 2029, 2052, 2146
NgoMIV GCCGGC 1 cut(s) 2341
NlaIV GGNNCC 5 cut(s) 827, 965, 1071, 2079, 2366
NmuCI GTSAC 1 cut(s) 1526
NsiI ATGCAT 1 cut(s) 1584
NspI RCATGY 2 cut(s) 901, 1449
PaeI GCATGC 2 cut(s) 901, 1449
PctI GAATGC 2 cut(s) 1272, 1678
PdiI GCCGGC 1 cut(s) 2343
PdmI GAANNNNTTC 1 cut(s) 694
PkrI GCNGC 3 cut(s) 927, 1652, 2340
PleI GAGTC 2 cut(s) 1086, 1091
PpsI GAGTC 2 cut(s) 1086, 1091
Ppu21I YACGTR 2 cut(s) 977, 2406
PpuMI RGGWCCY 1 cut(s) 2077
PshBI ATTAAT 1 cut(s) 1665
PsiI TTATAA 2 cut(s) 1091, 1233
Psp124BI GAGCTC 1 cut(s) 556
Psp5II RGGWCCY 1 cut(s) 2077
Psp6I CCWGG 2 cut(s) 1072, 1639
PspGI CCWGG 2 cut(s) 1072, 1639
PspN4I GGNNCC 5 cut(s) 827, 965, 1071, 2079, 2366
PspPI GGNCC 4 cut(s) 208, 1070, 2077, 2365
PspPPI RGGWCCY 1 cut(s) 2077
PsuI RGATCY 4 cut(s) 963, 1360, 2029, 2146
RsaI GTAC 5 cut(s) 722, 979, 1710, 2002, 2022
RsaNI GTAC 5 cut(s) 721, 978, 1709, 2001, 2021
RseI CAYNNNNRTG 2 cut(s) 933, 2535
SacI GAGCTC 1 cut(s) 556
SatI GCNGC 3 cut(s) 926, 1651, 2339
Sau3AI GATC 8 cut(s) 819, 963, 1033, 1298, 1360, 2029, 2052, 2146
Sau96I GGNCC 4 cut(s) 208, 1070, 2077, 2365
ScaI AGTACT 2 cut(s) 722, 1710
SchI GAGTC 2 cut(s) 1087, 1092
ScrFI CCNGG 2 cut(s) 1074, 1641
SduI GDGCHC 2 cut(s) 556, 1418
SfaNI GCATC 8 cut(s) 461, 826, 1207, 1569, 1777, 1844, 1950, 2354
SinI GGWCC 3 cut(s) 208, 1070, 2077
SmiMI CAYNNNNRTG 2 cut(s) 933, 2535
SmlI CTYRAG 5 cut(s) 269, 664, 1306, 1955, 2087
SmoI CTYRAG 5 cut(s) 269, 664, 1306, 1955, 2087
SnaBI TACGTA 1 cut(s) 977
SphI GCATGC 2 cut(s) 901, 1449
SsiI CCGC 2 cut(s) 193, 2523
SspMI CTAG 7 cut(s) 62, 890, 981, 1031, 1098, 1851, 2192
SstI GAGCTC 1 cut(s) 556
StyD4I CCNGG 2 cut(s) 1072, 1639
StyI CCWWGG 1 cut(s) 61
TaaI ACNGT 6 cut(s) 224, 460, 1420, 1575, 1782, 1970
TaiI ACGT 4 cut(s) 979, 2158, 2182, 2408
TaqI TCGA 6 cut(s) 243, 447, 1081, 1195, 1740, 2508
TatI WGTACW 3 cut(s) 720, 1708, 2020
TscAI CASTG 5 cut(s) 129, 404, 935, 1425, 2569
TseFI GTSAC 1 cut(s) 1526
TseI GCWGC 3 cut(s) 925, 1650, 2338
Tsp45I GTSAC 1 cut(s) 1526
TspGWI ACGGA 1 cut(s) 221
TspRI CASTG 5 cut(s) 129, 404, 935, 1425, 2569
VpaK11BI GGWCC 3 cut(s) 208, 1070, 2077
VspI ATTAAT 1 cut(s) 1665
XapI RAATTY 3 cut(s) 511, 2045, 2380
XbaI TCTAGA 2 cut(s) 1850, 2191
XceI RCATGY 2 cut(s) 901, 1449
XmaJI CCTAGG 1 cut(s) 61
XmnI GAANNNNTTC 1 cut(s) 694
XspI CTAG 7 cut(s) 62, 890, 981, 1031, 1098, 1851, 2192
ZrmI AGTACT 2 cut(s) 722, 1710
Zsp2I ATGCAT 1 cut(s) 1584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.