Rorug02G0455700

TMV resistance protein N-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000307
Physical Location & Seq
Forward (+)
58547703 .. 58552354
4652 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0455700.1

Sequence Viewer

Length: 1857 bp
ATGACTACTGCCACTAGAGCCATTAGTAGCAACAGCCTGAGCAATAGTCCTAACCATTACCAGTGGTGCAGTCAGACATGTTGGAGATCCATTGCGCTGCCAATCCCGAAACCCAGTTGCCAGAACTTGACAATCGCCACCAGGAACCGATCGTCGTCCTTGATTCCTAGAGCCTCTGGGGATTCCTCACCGGAGCCGGAAAATGAAGGAAGCAAGAACACCAAGACCAAGACCACAACAGTTGGTGGTACTAGTGCTGCTTCTGATGAGAAGAAGAAGAATAAGAAGAGTGAAGTTGTTAGTCAAGTGCTGACAGAGAAAGAGCAGAAGCAGAAGCAGCAGCAGCAGAGGAGGCTGGAGCTGGAAGACGTGAACCCAGTTGGGCTGGGCCGGAGATCACGCCAGTTGTTTGATGAAGTGTGGCGCAAGTTTTCTGGGCTGGGGCAGATCTCAAGGACTAGCTTACCCGATGAAAGAGACGCCCTTGATGCCCTTCTCATCAGGGAAGGTCCCATGTGCGAGTTTGTTATTCCCGGAGCCCAAAACACCACGGTTTTGGTAGTCGGAGCTACGTCTAAGATCGGCCGGATAGTTGTCCGCAAGCTTATGCTCAGAGGCTACACGGTTAAGGCTCTGGTGAGGAAGGCGGATCAGGAAGTGGTGGACATGTTGCCGAGGTCGGTGGAGATTGTGATTGGGGATGTGGGTGAGCCGGATAGTCTAAGAGCCGCCGTACAGGGCTGCAACAAGATCATATACTGTGCAACTGCACGGTCTACTATTAGTGGAGACCTCTACAGGGTTGATAATAGAGGAGTCTACAACCTCACTAAAGCATTTCAGGACTATAACAACAAACTTGCGCAATTACGAGCAGGAAAAAGTAGCAAAAGCAAGCTCACGCTTGCTAAGTTCAAGAATCCGGAGTCAGTAAATGGATGGGAAGTTTATAAGGGGACTTATTTCCAGGATGTGGTTGCTTCCAAGTATGATGGAGGCATGGATGCTAAATTCGAATTCACTTTTACTGGAGATGCGGTTTTCTCAGGATATGTTTTCACTAGGGGAGGGTATGTTGAACTATCAACAAAGCTTTCACTTCCTTTGGGAAGCACTCTTGACAGGTATGAAGGTCTAGTTCTTTCTGTTGGTGGGAATGGAAGGGCTTATATATTAATTCTTGAAGCCGGTCCTTCAGCAGATACATCTCAAAGTAAACTATATTTTGCAAGATTTAACACAAAAGCGGGATTTTGTAGGGTCAGGGTGCCATTTTCATCCTTCAGGCCGGTGAAACCTGATGATCCGCCATTGGATCCATTCCTTGTACATACATTAACTATACGTTTTGAGCCCAGAAGACAGAAAGCTGTTGAAGCACGTCCAGGAGAGAAACAAGACCCCAGAAGCTTTAAGCTTATATTGGAGTACATCAAAGCTCTACCTGCCGGTCAAGAAACTGACTTCATTCTAGTTTCATGTACGGGATCAGGAATAGAACCTAACAGAAGGGAGCAAGTTCTTAAAGCCAAGAGGGCTGGGGAAGATTCATTGCGAAGATCAGGAGTTGGATACACAATTATTCGACCTGGTCCCCTAAAGGAAGAACCTGGCGGACAACGTGCTCTCATATTTGATCAAGGAAACAGGATTTCTCAGGGGATCAGCTGTGCTGATGTAGCTGATATCTGTGTTAAGGCATTGCATGATTCAACTGCAAGGAACAAAAGCTTTGATGTATGTTACGAATATGTGGCTGATCAAGGGAAGGAACTCTATGAGCTGGTTGCACATTTGCCGGACAAAGCCAATAATTATCTGACGCCAGCACTCTCAGCTCTAGAGAAGAACACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

618

Amino Acids

68.21

Weight (kDa)

9.34

Isoelectric Point (pI)

40.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NmrA PF05368 182 - 256 3.3e-10 NmrA-like family
Epimerase PF01370 185 - 285 5.1e-06 NAD dependent epimerase/dehydratase family
NAD_binding_10 PF13460 189 - 282 1.7e-12 NAD(P)H-binding
CIA30 PF08547 331 - 431 1.8e-09 Complex I intermediate-associated protein 30 (CIA30)
NAD_binding_10 PF13460 483 - 570 2.4e-12 NAD(P)H-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000307)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g16600 FvH4_1g16610 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16621 FvH4_1g16630 FvH4_1g16640 FvH4_1g16640 FvH4_1g16650 FvH4_1g16650 FvH4_3g27631 FvH4_4g11392 FvH4_4g11542
prunus_persica Prupe.4G224500_v2.0.a1 Prupe.4G226900_v2.0.a1 Prupe.4G227000_v2.0.a1
pyrus_communis pycom11g18180 pycom11g18210 pycom11g18230 pycom11g18270 pycom11g18350 pycom11g18360 pycom11g18370
rosa_chinensis RchiOBHm_Chr2g0106511 RchiOBHm_Chr2g0106541 RchiOBHm_Chr2g0106551 RchiOBHm_Chr2g0106571 RchiOBHm_Chr2g0124621 RchiOBHm_Chr6g0251591 RchiOBHm_Chr6g0251631 RchiOBHm_Chr6g0251641
rosa_laevigata RLG00000015443 RLG00000015444 RLG00000015458 RLG00000017510 RLG00000017511 RLG00000017512 RLG00000017515 RLG00000017516 RLG00000017517 RLG00000018809 RLG00000020934 RLG00000020935 RLG00000034092
rosa_multiflora Rmu_co8285777.1_g000001 Rmu_sc0000762.1_g000001 Rmu_sc0001872.1_g000006 Rmu_sc0005255.1_g000019 Rmu_sc0005597.1_g000006 Rmu_sc0012104.1_g000001 Rmu_sc0017105.1_g000011 Rmu_sc0022904.1_g000001 Rmu_ssc0000135.1_g000049 Rmu_ssc0000213.1_g000047
rosa_roxburghii Rroxscaffold_2G00092830 Rroxscaffold_2G00119790 Rroxscaffold_2G00137010 Rroxscaffold_2G00137030 Rroxscaffold_2G00137070 Rroxscaffold_7G00216560
rosa_rugosa Rorug02G0136100 Rorug02G0136200 Rorug02G0136300 Rorug02G0136400 Rorug02G0251800 Rorug02G0251800 Rorug02G0455500 Rorug02G0455600 Rorug02G0455700 Rorug05G0195300
rosa_samantha Rh2AG187400 Rh2AG187500 Rh2AG187600 Rh2AG310500 Rh2BG198200 Rh2BG198300 Rh2BG198400 Rh2BG198600 Rh2BG318900 Rh2BG534300 Rh2CG192400 Rh2CG192500 Rh2CG192600 Rh2CG297500 Rh2DG193500 Rh2DG193600 Rh2DG193800 Rh2DG334200 Rh2DG543100 Rh5AG280400 Rh5BG285800 Rh5BG285900 Rh5CG317900 Rh5CG318000 Rh5DG294600 Rh5DG294700 Rh6AG012200 Rh6AG012700 Rh6BG011200 Rh6BG011700
rosa_wichuraiana Rw0G009380 Rw2G014610 Rw2G014630 Rw2G014640 Rw2G014680 Rw2G025120 Rw2G043000 Rw5G026490 Rw6G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 951
Acc16I TGCGCA 1 cut(s) 864
Acc36I ACCTGC 1 cut(s) 1453
AccB1I GGYRCC 1 cut(s) 1267
AccB7I CCANNNNNTGG 1 cut(s) 973
AccI GTMKAC 2 cut(s) 776, 819
AccIII TCCGGA 1 cut(s) 922
AciI CCGC 7 cut(s) 598, 647, 729, 1037, 1247, 1307, 1614
AclWI GGATC 7 cut(s) 81, 657, 1298, 1310, 1323, 1495, 1670
AcoI YGGCCR 1 cut(s) 583
AcsI RAATTY 2 cut(s) 1010, 1016
AcuI CTGAAG 2 cut(s) 1179, 1267
AcyI GRCGYC 2 cut(s) 480, 1823
AfaI GTAC 5 cut(s) 250, 735, 1329, 1430, 1483
AfiI CCNNNNNNNGG 2 cut(s) 799, 973
AflIII ACRYGT 2 cut(s) 77, 666
AgsI TTSAA 5 cut(s) 916, 1079, 1184, 1376, 1713
AhlI ACTAGT 1 cut(s) 251
AjiI CACGTC 2 cut(s) 370, 1382
AjnI CCWGG 5 cut(s) 140, 966, 1384, 1588, 1609
Alw21I GWGCWC 1 cut(s) 1627
Alw26I GTCTC 2 cut(s) 471, 783
AlwI GGATC 7 cut(s) 81, 657, 1298, 1310, 1323, 1495, 1670
Aor13HI TCCGGA 1 cut(s) 922
AoxI GGCC 3 cut(s) 388, 583, 1286
ApeKI GCWGC 6 cut(s) 97, 257, 337, 340, 343, 741
ApoI RAATTY 2 cut(s) 1010, 1016
AseI ATTAAT 1 cut(s) 1175
AspLEI GCGC 3 cut(s) 97, 426, 865
AspS9I GGNCC 4 cut(s) 388, 509, 1190, 1592
AsuC2I CCSGG 1 cut(s) 534
AsuHPI GGTGA 4 cut(s) 180, 649, 719, 1303
AsuII TTCGAA 1 cut(s) 1014
AvaII GGWCC 3 cut(s) 509, 1190, 1592
BamHI GGATCC 1 cut(s) 1315
BanI GGYRCC 1 cut(s) 1267
BanII GRGCYC 2 cut(s) 541, 1356
BbsI GAAGAC 2 cut(s) 372, 1366
Bbv12I GWGCWC 1 cut(s) 1627
BbvI GCAGC 6 cut(s) 84, 244, 349, 352, 355, 728
BccI CCATC 2 cut(s) 933, 986
BceAI ACGGC 1 cut(s) 716
BciT130I CCWGG 5 cut(s) 142, 968, 1386, 1590, 1611
BciVI GTATCC 1 cut(s) 1565
BclI TGATCA 2 cut(s) 1636, 1759
BcnI CCSGG 1 cut(s) 534
BcoDI GTCTC 2 cut(s) 471, 783
BcuI ACTAGT 1 cut(s) 251
BfaI CTAG 8 cut(s) 15, 168, 252, 459, 1062, 1136, 1472, 1841
BfmI CTRYAG 1 cut(s) 796
BfuAI ACCTGC 1 cut(s) 1453
BfuI GTATCC 1 cut(s) 1565
BglI GCCNNNNNGGC 1 cut(s) 1535
BglII AGATCT 1 cut(s) 447
BisI GCNGC 7 cut(s) 98, 258, 338, 341, 344, 729, 742
BlsI GCNGC 7 cut(s) 99, 259, 339, 342, 345, 730, 743
Bme1390I CCNGG 6 cut(s) 142, 534, 968, 1386, 1590, 1611
Bme18I GGWCC 3 cut(s) 509, 1190, 1592
BmgBI CACGTC 2 cut(s) 370, 1382
BmgT120I GGNCC 4 cut(s) 388, 509, 1190, 1592
BmiI GGNNCC 7 cut(s) 146, 195, 511, 538, 1269, 1317, 1594
BmrFI CCNGG 6 cut(s) 142, 534, 968, 1386, 1590, 1611
BmrI ACTGGG 2 cut(s) 108, 371
BmsI GCATC 3 cut(s) 478, 994, 1024
BmuI ACTGGG 2 cut(s) 108, 371
BpiI GAAGAC 2 cut(s) 372, 1366
BpmI CTGGAG 2 cut(s) 377, 1050
Bpu10I CCTNAGC 1 cut(s) 38
Bpu14I TTCGAA 1 cut(s) 1014
BpuEI CTTGAG 1 cut(s) 436
BpuMI CCSGG 1 cut(s) 534
BsaHI GRCGYC 2 cut(s) 480, 1823
BsaI GGTCTC 1 cut(s) 783
BsaJI CCNNGG 2 cut(s) 549, 674
BsaWI WCCGGW 2 cut(s) 190, 922
BsaXI ACNNNNNCTCC 4 cut(s) 1023, 1053, 1059, 1089
Bsc4I CCNNNNNNNGG 2 cut(s) 799, 973
Bse118I RCCGGY 3 cut(s) 1187, 1288, 1448
Bse1I ACTGG 5 cut(s) 61, 114, 377, 403, 1033
Bse3DI GCAATG 3 cut(s) 90, 1550, 1700
BseAI TCCGGA 1 cut(s) 922
BseBI CCWGG 5 cut(s) 142, 968, 1386, 1590, 1611
BseDI CCNNGG 2 cut(s) 549, 674
BseGI GGATG 5 cut(s) 706, 944, 976, 1009, 1277
BseLI CCNNNNNNNGG 2 cut(s) 799, 973
BseMI GCAATG 3 cut(s) 90, 1550, 1700
BseMII CTCAG 5 cut(s) 29, 625, 1059, 1670, 1848
BseNI ACTGG 5 cut(s) 61, 114, 377, 403, 1033
BseRI GAGGAG 2 cut(s) 364, 828
BseX3I CGGCCG 1 cut(s) 583
BseXI GCAGC 6 cut(s) 84, 244, 349, 352, 355, 728
BseYI CCCAGC 3 cut(s) 385, 439, 1538
BsgI GTGCAG 2 cut(s) 88, 753
Bsh1285I CGRYCG 2 cut(s) 152, 586
BshFI GGCC 3 cut(s) 390, 585, 1288
BshNI GGYRCC 1 cut(s) 1267
BsiEI CGRYCG 2 cut(s) 152, 586
BsiHKAI GWGCWC 1 cut(s) 1627
BslFI GGGAC 3 cut(s) 495, 970, 1578
BslI CCNNNNNNNGG 2 cut(s) 799, 973
BsmAI GTCTC 2 cut(s) 471, 783
BsmBI CGTCTC 1 cut(s) 471
BsmFI GGGAC 3 cut(s) 495, 970, 1578
BsnI GGCC 3 cut(s) 390, 585, 1288
Bso31I GGTCTC 1 cut(s) 783
Bsp119I TTCGAA 1 cut(s) 1014
Bsp1286I GDGCHC 3 cut(s) 541, 1356, 1627
Bsp13I TCCGGA 1 cut(s) 922
Bsp1407I TGTACA 1 cut(s) 1327
BspACI CCGC 7 cut(s) 598, 647, 729, 1037, 1247, 1307, 1614
BspANI GGCC 3 cut(s) 390, 585, 1288
BspCNI CTCAG 5 cut(s) 30, 624, 1058, 1669, 1847
BspEI TCCGGA 1 cut(s) 922
BspLI GGNNCC 7 cut(s) 146, 195, 511, 538, 1269, 1317, 1594
BspMI ACCTGC 1 cut(s) 1453
BspPI GGATC 7 cut(s) 81, 657, 1298, 1310, 1323, 1495, 1670
BspT104I TTCGAA 1 cut(s) 1014
BspT107I GGYRCC 1 cut(s) 1267
BspTNI GGTCTC 1 cut(s) 783
BsrDI GCAATG 3 cut(s) 90, 1550, 1700
BsrFI RCCGGY 3 cut(s) 1187, 1288, 1448
BsrGI TGTACA 1 cut(s) 1327
BsrI ACTGG 5 cut(s) 61, 114, 377, 403, 1033
BssAI RCCGGY 3 cut(s) 1187, 1288, 1448
BssECI CCNNGG 2 cut(s) 549, 674
BssNI GRCGYC 2 cut(s) 480, 1823
Bst2UI CCWGG 5 cut(s) 142, 968, 1386, 1590, 1611
Bst4CI ACNGT 5 cut(s) 241, 553, 625, 761, 774
Bst6I CTCTTC 1 cut(s) 281
BstACI GRCGYC 2 cut(s) 480, 1823
BstAUI TGTACA 1 cut(s) 1327
BstBI TTCGAA 1 cut(s) 1014
BstC8I GCNNGC 4 cut(s) 602, 896, 906, 1827
BstDEI CTNAG 8 cut(s) 38, 576, 611, 722, 909, 1045, 1656, 1834
BstDSI CCRYGG 1 cut(s) 549
BstF5I GGATG 5 cut(s) 706, 944, 976, 1009, 1277
BstHHI GCGC 3 cut(s) 97, 426, 865
BstMAI GTCTC 2 cut(s) 471, 783
BstMCI CGRYCG 2 cut(s) 152, 586
BstNI CCWGG 5 cut(s) 142, 968, 1386, 1590, 1611
BstNSI RCATGY 2 cut(s) 81, 670
BstSCI CCNGG 6 cut(s) 140, 532, 966, 1384, 1588, 1609
BstSFI CTRYAG 1 cut(s) 796
BstV1I GCAGC 6 cut(s) 84, 244, 349, 352, 355, 728
BstV2I GAAGAC 2 cut(s) 372, 1366
BstX2I RGATCY 3 cut(s) 86, 447, 1315
BstXI CCANNNNNNTGG 1 cut(s) 556
BstYI RGATCY 3 cut(s) 86, 447, 1315
BstZI CGGCCG 1 cut(s) 583
BsuI GTATCC 1 cut(s) 1565
BsuRI GGCC 3 cut(s) 390, 585, 1288
BtgI CCRYGG 1 cut(s) 549
BtrI CACGTC 2 cut(s) 370, 1382
BtsCI GGATG 5 cut(s) 706, 944, 976, 1009, 1277
BtsIMutI CAGTG 1 cut(s) 68
BveI ACCTGC 1 cut(s) 1453
Cac8I GCNNGC 4 cut(s) 602, 896, 906, 1827
CfoI GCGC 3 cut(s) 97, 426, 865
Cfr10I RCCGGY 3 cut(s) 1187, 1288, 1448
Cfr13I GGNCC 4 cut(s) 388, 509, 1190, 1592
CseI GACGC 2 cut(s) 488, 1831
CsiI ACCWGGT 1 cut(s) 1588
Csp6I GTAC 5 cut(s) 249, 734, 1328, 1429, 1482
CspCI CAANNNNNGTGG 2 cut(s) 223, 258
CviAII CATG 6 cut(s) 78, 514, 667, 1000, 1479, 1706
CviQI GTAC 5 cut(s) 249, 734, 1328, 1429, 1482
DdeI CTNAG 8 cut(s) 38, 576, 611, 722, 909, 1045, 1656, 1834
EaeI YGGCCR 1 cut(s) 583
EagI CGGCCG 1 cut(s) 583
Eam1104I CTCTTC 1 cut(s) 281
EarI CTCTTC 1 cut(s) 281
EciI GGCGGA 3 cut(s) 662, 1296, 1629
EclXI CGGCCG 1 cut(s) 583
Eco24I GRGCYC 2 cut(s) 541, 1356
Eco31I GGTCTC 1 cut(s) 783
Eco32I GATATC 1 cut(s) 1687
Eco47I GGWCC 3 cut(s) 509, 1190, 1592
Eco52I CGGCCG 1 cut(s) 583
Eco57I CTGAAG 2 cut(s) 1179, 1267
EcoO109I RGGNCCY 1 cut(s) 509
EcoRI GAATTC 1 cut(s) 1016
EcoRII CCWGG 5 cut(s) 140, 966, 1384, 1588, 1609
EcoRV GATATC 1 cut(s) 1687
EcoT38I GRGCYC 2 cut(s) 541, 1356
Esp3I CGTCTC 1 cut(s) 471
FaeI CATG 6 cut(s) 81, 517, 670, 1003, 1482, 1709
FaqI GGGAC 3 cut(s) 495, 970, 1578
FatI CATG 6 cut(s) 77, 513, 666, 999, 1478, 1705
FauI CCCGC 1 cut(s) 1240
FbaI TGATCA 2 cut(s) 1636, 1759
FblI GTMKAC 2 cut(s) 776, 819
Fnu4HI GCNGC 7 cut(s) 98, 258, 338, 341, 344, 729, 742
FokI GGATG 5 cut(s) 713, 951, 983, 1016, 1264
FriOI GRGCYC 2 cut(s) 541, 1356
Fsp4HI GCNGC 7 cut(s) 98, 258, 338, 341, 344, 729, 742
FspBI CTAG 8 cut(s) 15, 168, 252, 459, 1062, 1136, 1472, 1841
FspI TGCGCA 1 cut(s) 864
GlaI GCGC 3 cut(s) 96, 425, 864
GluI GCNGC 7 cut(s) 98, 258, 338, 341, 344, 729, 742
GsaI CCCAGC 3 cut(s) 389, 443, 1542
GsuI CTGGAG 2 cut(s) 377, 1050
HaeIII GGCC 3 cut(s) 390, 585, 1288
HgaI GACGC 2 cut(s) 488, 1831
HhaI GCGC 3 cut(s) 97, 426, 865
Hin1I GRCGYC 2 cut(s) 480, 1823
Hin1II CATG 6 cut(s) 81, 517, 670, 1003, 1482, 1709
Hin6I GCGC 3 cut(s) 95, 424, 863
HinP1I GCGC 3 cut(s) 95, 424, 863
HindIII AAGCTT 5 cut(s) 602, 1091, 1408, 1415, 1729
HinfI GANTC 7 cut(s) 163, 182, 816, 919, 926, 1547, 1709
HphI GGTGA 4 cut(s) 180, 649, 719, 1303
Hpy166II GTNNAC 5 cut(s) 373, 664, 777, 820, 1217
Hpy188I TCNGA 5 cut(s) 75, 265, 566, 614, 1821
Hpy8I GTNNAC 5 cut(s) 373, 664, 777, 820, 1217
Hpy99I CGWCG 1 cut(s) 157
HpyCH4III ACNGT 5 cut(s) 241, 553, 625, 761, 774
HpyCH4IV ACGT 5 cut(s) 369, 572, 1345, 1381, 1621
HpyCH4V TGCA 8 cut(s) 69, 744, 764, 770, 1229, 1705, 1718, 1790
HpyF3I CTNAG 8 cut(s) 38, 576, 611, 722, 909, 1045, 1656, 1834
HpySE526I ACGT 5 cut(s) 369, 572, 1345, 1381, 1621
Hsp92I GRCGYC 2 cut(s) 480, 1823
Hsp92II CATG 6 cut(s) 81, 517, 670, 1003, 1482, 1709
HspAI GCGC 3 cut(s) 95, 424, 863
Kpn2I TCCGGA 1 cut(s) 922
Ksp22I TGATCA 2 cut(s) 1636, 1759
LmnI GCTCC 5 cut(s) 193, 358, 536, 566, 1513
Lsp1109I GCAGC 6 cut(s) 84, 244, 349, 352, 355, 728
LweI GCATC 3 cut(s) 478, 994, 1024
MabI ACCWGGT 1 cut(s) 1588
MaeI CTAG 8 cut(s) 15, 168, 252, 459, 1062, 1136, 1472, 1841
MaeII ACGT 5 cut(s) 369, 572, 1345, 1381, 1621
MaeIII GTNAC 1 cut(s) 1742
MboII GAAGA 9 cut(s) 283, 286, 289, 298, 377, 1371, 1556, 1569, 1616
MflI RGATCY 3 cut(s) 86, 447, 1315
MhlI GDGCHC 3 cut(s) 541, 1356, 1627
MluCI AATT 6 cut(s) 866, 1010, 1016, 1176, 1578, 1813
MlyI GAGTC 2 cut(s) 825, 935
MmeI TCCRAC 3 cut(s) 62, 544, 1549
MroI TCCGGA 1 cut(s) 922
MseI TTAA 7 cut(s) 627, 1175, 1236, 1337, 1413, 1524, 1695
MspA1I CMGCKG 1 cut(s) 1668
MspR9I CCNGG 6 cut(s) 142, 534, 968, 1386, 1590, 1611
MvaI CCWGG 5 cut(s) 142, 968, 1386, 1590, 1611
NciI CCSGG 1 cut(s) 534
NlaIII CATG 6 cut(s) 81, 517, 670, 1003, 1482, 1709
NlaIV GGNNCC 7 cut(s) 146, 195, 511, 538, 1269, 1317, 1594
NmeAIII GCCGAG 1 cut(s) 699
NsbI TGCGCA 1 cut(s) 864
NspI RCATGY 2 cut(s) 81, 670
NspV TTCGAA 1 cut(s) 1014
PciI ACATGT 2 cut(s) 77, 666
PfeI GAWTC 5 cut(s) 163, 182, 919, 1547, 1709
PflFI GACNNNGTC 1 cut(s) 1590
PflMI CCANNNNNTGG 1 cut(s) 973
PfoI TCCNGGA 3 cut(s) 532, 966, 1384
PkrI GCNGC 7 cut(s) 99, 259, 339, 342, 345, 730, 743
Ple19I CGATCG 1 cut(s) 152
PleI GAGTC 2 cut(s) 824, 934
PpsI GAGTC 2 cut(s) 824, 934
PpuMI RGGWCCY 1 cut(s) 509
PscI ACATGT 2 cut(s) 77, 666
PshBI ATTAAT 1 cut(s) 1175
PsiI TTATAA 1 cut(s) 951
Psp5II RGGWCCY 1 cut(s) 509
Psp6I CCWGG 5 cut(s) 140, 966, 1384, 1588, 1609
PspFI CCCAGC 3 cut(s) 385, 439, 1538
PspGI CCWGG 5 cut(s) 140, 966, 1384, 1588, 1609
PspN4I GGNNCC 7 cut(s) 146, 195, 511, 538, 1269, 1317, 1594
PspPI GGNCC 4 cut(s) 388, 509, 1190, 1592
PspPPI RGGWCCY 1 cut(s) 509
PsuI RGATCY 3 cut(s) 86, 447, 1315
PsyI GACNNNGTC 1 cut(s) 1590
PvuI CGATCG 1 cut(s) 152
PvuII CAGCTG 1 cut(s) 1668
RsaI GTAC 5 cut(s) 250, 735, 1329, 1430, 1483
RsaNI GTAC 5 cut(s) 249, 734, 1328, 1429, 1482
SaqAI TTAA 7 cut(s) 627, 1175, 1236, 1337, 1413, 1524, 1695
SatI GCNGC 7 cut(s) 98, 258, 338, 341, 344, 729, 742
Sau96I GGNCC 4 cut(s) 388, 509, 1190, 1592
SchI GAGTC 2 cut(s) 825, 935
ScrFI CCNGG 6 cut(s) 142, 534, 968, 1386, 1590, 1611
SduI GDGCHC 3 cut(s) 541, 1356, 1627
SexAI ACCWGGT 1 cut(s) 1588
SfaNI GCATC 3 cut(s) 478, 994, 1024
SfcI CTRYAG 1 cut(s) 796
SfuI TTCGAA 1 cut(s) 1014
SinI GGWCC 3 cut(s) 509, 1190, 1592
SmlI CTYRAG 1 cut(s) 451
SmoI CTYRAG 1 cut(s) 451
SpeI ACTAGT 1 cut(s) 251
Sse9I AATT 6 cut(s) 866, 1010, 1016, 1176, 1578, 1813
SsiI CCGC 7 cut(s) 598, 647, 729, 1037, 1247, 1307, 1614
SspMI CTAG 8 cut(s) 15, 168, 252, 459, 1062, 1136, 1472, 1841
StyD4I CCNGG 6 cut(s) 140, 532, 966, 1384, 1588, 1609
TaaI ACNGT 5 cut(s) 241, 553, 625, 761, 774
TaiI ACGT 5 cut(s) 372, 575, 1348, 1384, 1624
TaqI TCGA 2 cut(s) 1014, 1585
TasI AATT 6 cut(s) 866, 1010, 1016, 1176, 1578, 1813
TatI WGTACW 2 cut(s) 1327, 1428
TauI GCSGC 1 cut(s) 731
TfiI GAWTC 5 cut(s) 163, 182, 919, 1547, 1709
Tru1I TTAA 7 cut(s) 627, 1175, 1236, 1337, 1413, 1524, 1695
Tru9I TTAA 7 cut(s) 627, 1175, 1236, 1337, 1413, 1524, 1695
TscAI CASTG 1 cut(s) 68
TseI GCWGC 6 cut(s) 97, 257, 337, 340, 343, 741
TspDTI ATGAA 8 cut(s) 219, 429, 486, 1143, 1266, 1456, 1467, 1539
TspRI CASTG 1 cut(s) 68
Tth111I GACNNNGTC 1 cut(s) 1590
Van91I CCANNNNNTGG 1 cut(s) 973
VpaK11BI GGWCC 3 cut(s) 509, 1190, 1592
VspI ATTAAT 1 cut(s) 1175
XapI RAATTY 2 cut(s) 1010, 1016
XbaI TCTAGA 1 cut(s) 1840
XceI RCATGY 2 cut(s) 81, 670
XmiI GTMKAC 2 cut(s) 776, 819
XspI CTAG 8 cut(s) 15, 168, 252, 459, 1062, 1136, 1472, 1841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.