Rh6AG012700

resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000307
Physical Location & Seq
Reverse (-)
1377977 .. 1387992
10016 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG012700.1

Sequence Viewer

Length: 2943 bp
ATGGACTTTGAAAGAAAGGATGAAATTATTCTTCAGCAGCACCTGCAGCTTCGTTACTTTCATACAGAAATTCCTGATTGGTGTCGTCACAAGAGTAGTGGGTCTTCTGTAGTAGCCATGCAAGTCTCTGATCCTGAAATTATTAAGAGCTTGGGAGTAGCCCTGTTTGTTGTTTTTGAAATCTTTGAGAGTGGTCACAATTTTGATAAGAGTTGGGAGTTGCAACAGACCCTTTGTACTTTTAAAGATGACCAAGGACTTGAACTTATCTATATCTTTAAAGAATTTGAAAAATTCCTGGCTGGAACACATGTATTATTTTGCTATGAGCCGCTAAAGTACTTTCAAGTTGCTGGAATGTTGAATAAAGCAAGTCGACTTGAGGCTTCAGTTTCAACACAGAGACCAGATCTGGCGATTAAGTCTTGTGGGATGCAACTGATCTTTCAGGAAGAAGCTAAAGAGTTTGCTCAAAAATTAAGTGAGGCTTGTAATCCTCAGACGGATTTCGAATTTGGTAGACATTGTAAGGAATTGATAAAGGCCAAGGGAAAGAAAAGCTCCGGTAATATAATGGCACCAAATGAAGCAGAAAAGATTAGCTGGAAATTTGATTTTAACATGCACCAGGGAGAACATCTACAGTTGTTGCTTTCAAAAGTCTATGAGGATTTCAATCGGGACATCATATATAATGCAACTTACCCTCATTGCGCTAAACTTCTGGAGTGGTTCGGTGATCATCATCTCAGTAGGGGACCTTCAGTGAAAATCCCGTTACCACCATCTCTATCTACTGATGGGAATTGGATAGGATTGGCTCTATGTGCACGTTTTTCAGACCACGAGAATCAAACTACCTCCATAGACAAAGTGAATCCAGAAATTGCTGAGCTTGTTTGTCATTTGGAAACTGAGAACAGTGGTTTCGAACATCTTCACCACTATCGACCAACCAATGAAGAACTCAAGCGGTTATGTCCTACAGAATACATTTGGCTATCTTATATACCACGTCAGGGGTATCTAGATCAGTTAAATGAGTGTGACCTCTTGGAGGCTTCATTTGCCAGCGAAAGCCGAGGATTATTTGCTGAAGAATGTGGTCTCCGTCTTGTCTACCAGCATGATGAGCAAGAGTTTAAGAATCTGTGTACCTTCATGAACTCGTTTCTGGACAAAAGATCTGAAAGGTTGGAAGAATATGAGGCTCCCAAGAAGGGTAAACACGTTGTAGAATCTGATTTCAACATGCACCCGAGAGAAGATCTACAGTTGCTGCTTTCAGTGCTCTATAAGCATGATGAGCAAGAGTTTAAGGATCTGTGTATCTCCATGAACTCGTTGCTGGACAAAAGATCAGGAAAGTTGGAAGAACAAGAGGCTCCCAAGAAGGGTAAACAAGTTCTAGAATCTGACTTCAACATGCACCCGAGAGAAGTTCTACAGTCGTTGCTTTCAGTACTCTATGAGGGACCATATGGACGTGAAAAGGACTTTGGCCTTTTTTTTCCTCATAAGGTAGTTCCTTTCTGGTTTTTCCATCACTATGCAGGGGACGTGGCACTGTGCGACTTTCCTCTGGACTTATCTGTTGATCAGAGATGGGTCGGTTTAGAACTATTTGTTATGGTTTCGAGTGGTTACACTATCAATGTTGAATCCTTTCTTGATGTTGATTTGTGTTCCAATGAAATTAGCACAGTAAGCACATCCGTAATGATAAACACTTGTCTGGGGTCAGATCAACTTGTTGTAATCCATATACCACGAGTGCGTTTTCCGGAGCAGTTGAATCAATGTCACGGTATCAGCGCATTGTTTAGAACCACCACTCCAGATATGAGGGTTCGAATGTGTGGAAGCCGTTTACTATACGAGCAAGATTTGGAAGACTTGATCCGTGCAATAACTGTGTGCACATTAGACAGTCAAGATGTCATTGATTCACTTTGTCAGCACATCCAACAATTACTTGGAAGTAACTTGCTGGAGGAACCTTCTGATCATGTAGTAGCAGTTGAAACCGTTGAGCAGAATTCAGTGGAAGGAGAAACTGAGGTTGGTCGCAGAAATGATCATTCCTCCACTGAAAGGGAGGACTTGATTCAGGAACGGAGAGAGAAAGTCTTCACTTCAATATTGCACAACTACAGATCTTATCTCCAACAAAAGCATGGTTGTATAGAGTCGGAAAGAATTATATCCCATTCTGAAGGCTATCTTTTGGACGATGGAGATCCAAAGCCGGTGTTTGCCACGCATCATTTACATGTAATGGTTGAGACTCGACTCTATGGGAGCCTTAGCTCAGAAGATTGGAAACAATCTCTCGAGTCATTGCTTCAGTATTTCAAGGGGGCCACTCTCAGTGTCAAAGGACAAATGATTGCTGTTTTAAATCCGTTCACTCCTTCCTCAGTAAACAACTTTTGTTTCCCTCGAAAGGAACTTCCAGGATGGTTCACGCAACAGACGAGAATGCCCAGGATTGGATTGATCATAGACCCACTTGTATGTGATAATGAGAATTGGATGGGATTTGCTGTGTGCGCTACTTTTTCAGTCCACGAGCATCCAAGTGCTGTCCTTGACAACCTGGCCACAAGGACTTTCAACGTTATGTGTCATTTGGCAGCATCGGATGGACGATGTTTGAGTCCTGCCCCGGTGTTTACCATAACAAAAGAGAAATTCAAGTGGCTACATCTTCGTGGATTTATGTGGCTAACCTACATACCTCGTACTTATCTTGCGGAGTTCAGAGAAGTACGTGATGCAGAAGCTAGAATTTATAATGATTGCCCAGGATTGATGGTGACAAGGTGGAGTATCCGTCCCTTGTTCAAGCAAGATGTGAAGGAATTTAATAAAGCAATAGTCCAGTGCTGGACTTCGTTCTTCGACAATTTATCTCATCCGTCAGTTTGTCGAGGCAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_3 LRR_8 NB-ARC TIR

Protein Analysis

980

Amino Acids

113.04

Weight (kDa)

5.5

Isoelectric Point (pI)

44.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000307)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g16600 FvH4_1g16610 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16621 FvH4_1g16630 FvH4_1g16640 FvH4_1g16640 FvH4_1g16650 FvH4_1g16650 FvH4_3g27631 FvH4_4g11392 FvH4_4g11542
prunus_persica Prupe.4G224500_v2.0.a1 Prupe.4G226900_v2.0.a1 Prupe.4G227000_v2.0.a1
pyrus_communis pycom11g18180 pycom11g18210 pycom11g18230 pycom11g18270 pycom11g18350 pycom11g18360 pycom11g18370
rosa_chinensis RchiOBHm_Chr2g0106511 RchiOBHm_Chr2g0106541 RchiOBHm_Chr2g0106551 RchiOBHm_Chr2g0106571 RchiOBHm_Chr2g0124621 RchiOBHm_Chr6g0251591 RchiOBHm_Chr6g0251631 RchiOBHm_Chr6g0251641
rosa_laevigata RLG00000015443 RLG00000015444 RLG00000015458 RLG00000017510 RLG00000017511 RLG00000017512 RLG00000017515 RLG00000017516 RLG00000017517 RLG00000018809 RLG00000020934 RLG00000020935 RLG00000034092
rosa_multiflora Rmu_co8285777.1_g000001 Rmu_sc0000762.1_g000001 Rmu_sc0001872.1_g000006 Rmu_sc0005255.1_g000019 Rmu_sc0005597.1_g000006 Rmu_sc0012104.1_g000001 Rmu_sc0017105.1_g000011 Rmu_sc0022904.1_g000001 Rmu_ssc0000135.1_g000049 Rmu_ssc0000213.1_g000047
rosa_roxburghii Rroxscaffold_2G00092830 Rroxscaffold_2G00119790 Rroxscaffold_2G00137010 Rroxscaffold_2G00137030 Rroxscaffold_2G00137070 Rroxscaffold_7G00216560
rosa_rugosa Rorug02G0136100 Rorug02G0136200 Rorug02G0136300 Rorug02G0136400 Rorug02G0251800 Rorug02G0251800 Rorug02G0455500 Rorug02G0455600 Rorug02G0455700 Rorug05G0195300
rosa_samantha Rh2AG187400 Rh2AG187500 Rh2AG187600 Rh2AG310500 Rh2BG198200 Rh2BG198300 Rh2BG198400 Rh2BG198600 Rh2BG318900 Rh2BG534300 Rh2CG192400 Rh2CG192500 Rh2CG192600 Rh2CG297500 Rh2DG193500 Rh2DG193600 Rh2DG193800 Rh2DG334200 Rh2DG543100 Rh5AG280400 Rh5BG285800 Rh5BG285900 Rh5CG317900 Rh5CG318000 Rh5DG294600 Rh5DG294700 Rh6AG012200 Rh6AG012700 Rh6BG011200 Rh6BG011700
rosa_wichuraiana Rw0G009380 Rw2G014610 Rw2G014630 Rw2G014640 Rw2G014680 Rw2G025120 Rw2G043000 Rw5G026490 Rw6G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2796
AarI CACCTGC 1 cut(s) 51
Acc36I ACCTGC 1 cut(s) 51
AccB1I GGYRCC 1 cut(s) 577
AccI GTMKAC 3 cut(s) 376, 520, 1119
AccIII TCCGGA 1 cut(s) 1783
AciI CCGC 3 cut(s) 332, 973, 2756
AclI AACGTT 1 cut(s) 2619
AclWI GGATC 4 cut(s) 125, 1329, 1894, 2234
AcoI YGGCCR 1 cut(s) 2601
AcsI RAATTY 9 cut(s) 69, 284, 293, 512, 608, 2038, 2693, 2790, 2864
AcuI CTGAAG 6 cut(s) 17, 372, 747, 1116, 2235, 2330
AfaI GTAC 6 cut(s) 238, 341, 1156, 1464, 2746, 2772
AfiI CCNNNNNNNGG 7 cut(s) 1019, 1057, 1220, 1394, 2094, 2446, 2492
AflIII ACRYGT 3 cut(s) 310, 1228, 2272
AjiI CACGTC 3 cut(s) 1016, 1487, 1561
AjnI CCWGG 6 cut(s) 297, 627, 2455, 2486, 2598, 2806
AjuI GAANNNNNNNTTGG 4 cut(s) 1482, 1514, 2046, 2078
AloI GAACNNNNNNTCC 2 cut(s) 1819, 1851
AluBI AGCT 8 cut(s) 49, 150, 458, 561, 603, 895, 2310, 2786
AluI AGCT 8 cut(s) 49, 150, 458, 561, 603, 895, 2310, 2786
Alw21I GWGCWC 3 cut(s) 832, 1293, 1922
Alw26I GTCTC 4 cut(s) 130, 397, 1112, 2279
Alw44I GTGCAC 2 cut(s) 828, 1918
AlwI GGATC 4 cut(s) 125, 1329, 1894, 2234
AlwNI CAGNNNCTG 2 cut(s) 43, 1279
Ama87I CYCGRG 3 cut(s) 1258, 1432, 2333
Aor13HI TCCGGA 1 cut(s) 1783
AoxI GGCC 4 cut(s) 543, 1501, 2361, 2601
ApaLI GTGCAC 2 cut(s) 828, 1918
ApeKI GCWGC 4 cut(s) 37, 46, 1279, 2636
ApoI RAATTY 9 cut(s) 69, 284, 293, 512, 608, 2038, 2693, 2790, 2864
Asp700I GAANNNNTTC 4 cut(s) 27, 936, 1665, 2129
AspLEI GCGC 3 cut(s) 716, 1817, 2555
AspS9I GGNCC 3 cut(s) 758, 1475, 2361
AsuC2I CCSGG 1 cut(s) 2669
AsuHPI GGTGA 3 cut(s) 749, 932, 2830
AsuII TTCGAA 3 cut(s) 510, 930, 1852
AvaI CYCGRG 3 cut(s) 1258, 1432, 2333
AvaII GGWCC 2 cut(s) 758, 1475
BaeGI GKGCMC 2 cut(s) 832, 1922
BalI TGGCCA 1 cut(s) 2603
BanI GGYRCC 1 cut(s) 577
BarI GAAGNNNNNNTAC 4 cut(s) 88, 120, 745, 777
BauI CACGAG 3 cut(s) 845, 1770, 2570
BbsI GAAGAC 3 cut(s) 96, 1899, 2122
Bbv12I GWGCWC 3 cut(s) 832, 1293, 1922
BbvI GCAGC 4 cut(s) 49, 58, 1266, 2648
BccI CCATC 9 cut(s) 793, 794, 1551, 1599, 2228, 2454, 2530, 2639, 2809
BceAI ACGGC 1 cut(s) 1851
BciT130I CCWGG 6 cut(s) 299, 629, 2457, 2488, 2600, 2808
BciVI GTATCC 1 cut(s) 2843
BclI TGATCA 5 cut(s) 739, 1597, 2005, 2077, 2499
BcnI CCSGG 1 cut(s) 2669
BcoDI GTCTC 4 cut(s) 130, 397, 1112, 2279
BfaI CTAG 3 cut(s) 1028, 1409, 2787
BfmI CTRYAG 7 cut(s) 44, 108, 641, 984, 1271, 1445, 2152
BfuAI ACCTGC 1 cut(s) 51
BfuI GTATCC 1 cut(s) 2843
BglII AGATCT 4 cut(s) 409, 1184, 1267, 2156
BisI GCNGC 5 cut(s) 38, 47, 332, 1280, 2637
BlpI GCTNAGC 1 cut(s) 891
BlsI GCNGC 5 cut(s) 39, 48, 333, 1281, 2638
BmcAI AGTACT 2 cut(s) 341, 1464
Bme1390I CCNGG 7 cut(s) 299, 629, 2457, 2488, 2600, 2669, 2808
Bme18I GGWCC 2 cut(s) 758, 1475
BmeT110I CYCGRG 3 cut(s) 1258, 1432, 2333
BmgBI CACGTC 3 cut(s) 1016, 1487, 1561
BmgT120I GGNCC 3 cut(s) 758, 1475, 2361
BmiI GGNNCC 8 cut(s) 579, 759, 1212, 1386, 1476, 1998, 2303, 2362
BmrFI CCNGG 7 cut(s) 299, 629, 2457, 2488, 2600, 2669, 2808
BmsI GCATC 5 cut(s) 423, 2272, 2584, 2648, 2767
BpiI GAAGAC 3 cut(s) 96, 1899, 2122
BpmI CTGGAG 3 cut(s) 746, 1821, 2012
Bpu10I CCTNAGC 1 cut(s) 2306
Bpu1102I GCTNAGC 1 cut(s) 891
Bpu14I TTCGAA 3 cut(s) 510, 930, 1852
BpuEI CTTGAG 2 cut(s) 401, 953
BpuMI CCSGG 1 cut(s) 2669
BsaAI YACGTR 1 cut(s) 2774
BsaBI GATNNNNATC 3 cut(s) 675, 744, 2238
BsaI GGTCTC 2 cut(s) 397, 1112
BsaJI CCNNGG 7 cut(s) 253, 546, 628, 1081, 2486, 2667, 2806
BsaWI WCCGGW 2 cut(s) 563, 1783
BsaXI ACNNNNNCTCC 4 cut(s) 1819, 1849, 2821, 2851
Bsc4I CCNNNNNNNGG 7 cut(s) 1019, 1057, 1220, 1394, 2094, 2446, 2492
Bse118I RCCGGY 1 cut(s) 2248
Bse1I ACTGG 1 cut(s) 2884
Bse3DI GCAATG 2 cut(s) 709, 2339
Bse8I GATNNNNATC 3 cut(s) 675, 744, 2238
BseAI TCCGGA 1 cut(s) 1783
BseBI CCWGG 6 cut(s) 299, 629, 2457, 2488, 2600, 2808
BseDI CCNNGG 7 cut(s) 253, 546, 628, 1081, 2486, 2667, 2806
BseGI GGATG 9 cut(s) 25, 438, 1712, 1962, 2465, 2541, 2575, 2650, 2917
BseJI GATNNNNATC 3 cut(s) 675, 744, 2238
BseLI CCNNNNNNNGG 7 cut(s) 1019, 1057, 1220, 1394, 2094, 2446, 2492
BseMI GCAATG 2 cut(s) 709, 2339
BseMII CTCAG 8 cut(s) 512, 763, 882, 906, 2049, 2325, 2383, 2433
BseNI ACTGG 1 cut(s) 2884
BseSI GKGCMC 2 cut(s) 832, 1922
BseXI GCAGC 4 cut(s) 49, 58, 1266, 2648
BshFI GGCC 4 cut(s) 545, 1503, 2363, 2603
BshNI GGYRCC 1 cut(s) 577
BsiHKAI GWGCWC 3 cut(s) 832, 1293, 1922
BsiHKCI CYCGRG 3 cut(s) 1258, 1432, 2333
BsiSI CCGG 4 cut(s) 564, 1784, 2249, 2669
BslFI GGGAC 5 cut(s) 695, 771, 1488, 1571, 2823
BslI CCNNNNNNNGG 7 cut(s) 1019, 1057, 1220, 1394, 2094, 2446, 2492
BsmAI GTCTC 4 cut(s) 130, 397, 1112, 2279
BsmFI GGGAC 5 cut(s) 695, 771, 1488, 1571, 2823
BsmI GAATGC 1 cut(s) 2487
BsnI GGCC 4 cut(s) 545, 1503, 2363, 2603
Bso31I GGTCTC 2 cut(s) 397, 1112
BsoBI CYCGRG 3 cut(s) 1258, 1432, 2333
Bsp119I TTCGAA 3 cut(s) 510, 930, 1852
Bsp1286I GDGCHC 3 cut(s) 832, 1293, 1922
Bsp13I TCCGGA 1 cut(s) 1783
Bsp1720I GCTNAGC 1 cut(s) 891
BspACI CCGC 3 cut(s) 332, 973, 2756
BspANI GGCC 4 cut(s) 545, 1503, 2363, 2603
BspCNI CTCAG 8 cut(s) 511, 762, 883, 907, 2050, 2324, 2382, 2432
BspEI TCCGGA 1 cut(s) 1783
BspHI TCATGA 1 cut(s) 1161
BspLI GGNNCC 8 cut(s) 579, 759, 1212, 1386, 1476, 1998, 2303, 2362
BspMAI CTGCAG 1 cut(s) 48
BspMI ACCTGC 1 cut(s) 51
BspPI GGATC 4 cut(s) 125, 1329, 1894, 2234
BspT104I TTCGAA 3 cut(s) 510, 930, 1852
BspT107I GGYRCC 1 cut(s) 577
BspTNI GGTCTC 2 cut(s) 397, 1112
BsrDI GCAATG 2 cut(s) 709, 2339
BsrFI RCCGGY 1 cut(s) 2248
BsrI ACTGG 1 cut(s) 2884
BssAI RCCGGY 1 cut(s) 2248
BssECI CCNNGG 7 cut(s) 253, 546, 628, 1081, 2486, 2667, 2806
BssSI CACGAG 3 cut(s) 845, 1770, 2570
BssT1I CCWWGG 2 cut(s) 253, 546
Bst2BI CACGAG 3 cut(s) 845, 1770, 2570
Bst2UI CCWGG 6 cut(s) 299, 629, 2457, 2488, 2600, 2808
BstAPI GCANNNNNTGC 1 cut(s) 43
BstBAI YACGTR 1 cut(s) 2774
BstBI TTCGAA 3 cut(s) 510, 930, 1852
BstC8I GCNNGC 1 cut(s) 1072
BstDEI CTNAG 9 cut(s) 498, 749, 891, 915, 2058, 2306, 2311, 2369, 2419
BstENI CCTNNNNNAGG 1 cut(s) 1055
BstF5I GGATG 9 cut(s) 25, 438, 1712, 1962, 2465, 2541, 2575, 2650, 2917
BstHHI GCGC 3 cut(s) 716, 1817, 2555
BstMAI GTCTC 4 cut(s) 130, 397, 1112, 2279
BstNI CCWGG 6 cut(s) 299, 629, 2457, 2488, 2600, 2808
BstNSI RCATGY 5 cut(s) 314, 625, 1255, 1429, 2276
BstSCI CCNGG 7 cut(s) 297, 627, 2455, 2486, 2598, 2667, 2806
BstSFI CTRYAG 7 cut(s) 44, 108, 641, 984, 1271, 1445, 2152
BstSLI GKGCMC 2 cut(s) 832, 1922
BstV1I GCAGC 4 cut(s) 49, 58, 1266, 2648
BstV2I GAAGAC 3 cut(s) 96, 1899, 2122
BstX2I RGATCY 6 cut(s) 409, 1184, 1267, 1321, 2156, 2239
BstYI RGATCY 6 cut(s) 409, 1184, 1267, 1321, 2156, 2239
BsuI GTATCC 1 cut(s) 2843
BsuRI GGCC 4 cut(s) 545, 1503, 2363, 2603
BtrI CACGTC 3 cut(s) 1016, 1487, 1561
BtsCI GGATG 9 cut(s) 25, 438, 1712, 1962, 2465, 2541, 2575, 2650, 2917
BtsIMutI CAGTG 8 cut(s) 771, 928, 1293, 1565, 2049, 2088, 2377, 2891
BveI ACCTGC 1 cut(s) 51
Cac8I GCNNGC 1 cut(s) 1072
CaiI CAGNNNCTG 2 cut(s) 43, 1279
CciI TCATGA 1 cut(s) 1161
CfoI GCGC 3 cut(s) 716, 1817, 2555
Cfr10I RCCGGY 1 cut(s) 2248
Cfr13I GGNCC 3 cut(s) 758, 1475, 2361
Csp6I GTAC 6 cut(s) 237, 340, 1155, 1463, 2745, 2771
CspCI CAANNNNNGTGG 2 cut(s) 79, 114
CviQI GTAC 6 cut(s) 237, 340, 1155, 1463, 2745, 2771
DdeI CTNAG 9 cut(s) 498, 749, 891, 915, 2058, 2306, 2311, 2369, 2419
DraI TTTAAA 3 cut(s) 244, 280, 2400
EaeI YGGCCR 1 cut(s) 2601
Eco130I CCWWGG 2 cut(s) 253, 546
Eco31I GGTCTC 2 cut(s) 397, 1112
Eco47I GGWCC 2 cut(s) 758, 1475
Eco57I CTGAAG 6 cut(s) 17, 372, 747, 1116, 2235, 2330
Eco88I CYCGRG 3 cut(s) 1258, 1432, 2333
EcoNI CCTNNNNNAGG 1 cut(s) 1055
EcoO109I RGGNCCY 1 cut(s) 758
EcoRI GAATTC 1 cut(s) 2038
EcoRII CCWGG 6 cut(s) 297, 627, 2455, 2486, 2598, 2806
EcoT14I CCWWGG 2 cut(s) 253, 546
ErhI CCWWGG 2 cut(s) 253, 546
FalI AAGNNNNNCTT 4 cut(s) 472, 504, 2208, 2240
FaqI GGGAC 5 cut(s) 695, 771, 1488, 1571, 2823
FauNDI CATATG 1 cut(s) 1480
FbaI TGATCA 5 cut(s) 739, 1597, 2005, 2077, 2499
FblI GTMKAC 3 cut(s) 376, 520, 1119
Fnu4HI GCNGC 5 cut(s) 38, 47, 332, 1280, 2637
FokI GGATG 9 cut(s) 32, 445, 1699, 1949, 2472, 2548, 2562, 2657, 2904
Fsp4HI GCNGC 5 cut(s) 38, 47, 332, 1280, 2637
FspBI CTAG 3 cut(s) 1028, 1409, 2787
GlaI GCGC 3 cut(s) 715, 1816, 2554
GluI GCNGC 5 cut(s) 38, 47, 332, 1280, 2637
GsuI CTGGAG 3 cut(s) 746, 1821, 2012
HaeIII GGCC 4 cut(s) 545, 1503, 2363, 2603
HapII CCGG 4 cut(s) 564, 1784, 2249, 2669
HhaI GCGC 3 cut(s) 716, 1817, 2555
Hin6I GCGC 3 cut(s) 714, 1815, 2553
HinP1I GCGC 3 cut(s) 714, 1815, 2553
HincII GTYRAC 1 cut(s) 377
HindII GTYRAC 1 cut(s) 377
HpaII CCGG 4 cut(s) 564, 1784, 2249, 2669
HphI GGTGA 3 cut(s) 749, 932, 2830
HpyAV CCTTC 9 cut(s) 771, 1168, 1213, 1387, 2010, 2042, 2210, 2424, 2854
HpyCH4IV ACGT 7 cut(s) 832, 1015, 1230, 1486, 1560, 2619, 2773
HpyF3I CTNAG 9 cut(s) 498, 749, 891, 915, 2058, 2306, 2311, 2369, 2419
HpySE526I ACGT 7 cut(s) 832, 1015, 1230, 1486, 1560, 2619, 2773
HspAI GCGC 3 cut(s) 714, 1815, 2553
Kpn2I TCCGGA 1 cut(s) 1783
Ksp22I TGATCA 5 cut(s) 739, 1597, 2005, 2077, 2499
LmnI GCTCC 5 cut(s) 566, 1216, 1390, 1786, 2301
Lsp1109I GCAGC 4 cut(s) 49, 58, 1266, 2648
LweI GCATC 5 cut(s) 423, 2272, 2584, 2648, 2767
MaeI CTAG 3 cut(s) 1028, 1409, 2787
MaeII ACGT 7 cut(s) 832, 1015, 1230, 1486, 1560, 2619, 2773
MaeIII GTNAC 9 cut(s) 53, 86, 194, 777, 1046, 1643, 1802, 1982, 2818
MflI RGATCY 6 cut(s) 409, 1184, 1267, 1321, 2156, 2239
MhlI GDGCHC 3 cut(s) 832, 1293, 1922
MlsI TGGCCA 1 cut(s) 2603
MluNI TGGCCA 1 cut(s) 2603
MlyI GAGTC 5 cut(s) 2198, 2281, 2286, 2345, 2668
MmeI TCCRAC 5 cut(s) 1176, 1350, 1990, 2172, 2191
Mox20I TGGCCA 1 cut(s) 2603
MroI TCCGGA 1 cut(s) 1783
MroXI GAANNNNTTC 4 cut(s) 27, 936, 1665, 2129
MscI TGGCCA 1 cut(s) 2603
MslI CAYNNNNRTG 5 cut(s) 1548, 2271, 2515, 2580, 2712
Msp20I TGGCCA 1 cut(s) 2603
MspI CCGG 4 cut(s) 564, 1784, 2249, 2669
MspR9I CCNGG 7 cut(s) 299, 629, 2457, 2488, 2600, 2669, 2808
Mva1269I GAATGC 1 cut(s) 2487
MvaI CCWGG 6 cut(s) 299, 629, 2457, 2488, 2600, 2808
NciI CCSGG 1 cut(s) 2669
NdeI CATATG 1 cut(s) 1480
NlaIV GGNNCC 8 cut(s) 579, 759, 1212, 1386, 1476, 1998, 2303, 2362
NmeAIII GCCGAG 1 cut(s) 1106
NmuCI GTSAC 5 cut(s) 86, 194, 1046, 1802, 2818
NspI RCATGY 5 cut(s) 314, 625, 1255, 1429, 2276
NspV TTCGAA 3 cut(s) 510, 930, 1852
PaeR7I CTCGAG 1 cut(s) 2333
PagI TCATGA 1 cut(s) 1161
PaqCI CACCTGC 1 cut(s) 51
PciI ACATGT 2 cut(s) 310, 2272
PcsI WCGNNNNNNNCGW 1 cut(s) 2474
PctI GAATGC 1 cut(s) 2487
PdmI GAANNNNTTC 4 cut(s) 27, 936, 1665, 2129
PfeI GAWTC 9 cut(s) 850, 877, 1147, 1238, 1412, 1661, 1795, 1946, 2107
PfoI TCCNGGA 1 cut(s) 2455
PkrI GCNGC 5 cut(s) 39, 48, 333, 1281, 2638
PleI GAGTC 5 cut(s) 2197, 2281, 2286, 2344, 2667
PpsI GAGTC 5 cut(s) 2197, 2281, 2286, 2344, 2667
Ppu21I YACGTR 1 cut(s) 2774
PpuMI RGGWCCY 1 cut(s) 758
PscI ACATGT 2 cut(s) 310, 2272
PsiI TTATAA 1 cut(s) 2796
Psp1406I AACGTT 1 cut(s) 2619
Psp5II RGGWCCY 1 cut(s) 758
Psp6I CCWGG 6 cut(s) 297, 627, 2455, 2486, 2598, 2806
PspGI CCWGG 6 cut(s) 297, 627, 2455, 2486, 2598, 2806
PspN4I GGNNCC 8 cut(s) 579, 759, 1212, 1386, 1476, 1998, 2303, 2362
PspPI GGNCC 3 cut(s) 758, 1475, 2361
PspPPI RGGWCCY 1 cut(s) 758
PstI CTGCAG 1 cut(s) 48
PstNI CAGNNNCTG 2 cut(s) 43, 1279
PsuI RGATCY 6 cut(s) 409, 1184, 1267, 1321, 2156, 2239
RsaI GTAC 6 cut(s) 238, 341, 1156, 1464, 2746, 2772
RsaNI GTAC 6 cut(s) 237, 340, 1155, 1463, 2745, 2771
RseI CAYNNNNRTG 5 cut(s) 1548, 2271, 2515, 2580, 2712
SalI GTCGAC 1 cut(s) 375
SatI GCNGC 5 cut(s) 38, 47, 332, 1280, 2637
Sau96I GGNCC 3 cut(s) 758, 1475, 2361
ScaI AGTACT 2 cut(s) 341, 1464
SchI GAGTC 5 cut(s) 2198, 2281, 2286, 2345, 2668
ScrFI CCNGG 7 cut(s) 299, 629, 2457, 2488, 2600, 2669, 2808
SduI GDGCHC 3 cut(s) 832, 1293, 1922
SfaNI GCATC 5 cut(s) 423, 2272, 2584, 2648, 2767
SfcI CTRYAG 7 cut(s) 44, 108, 641, 984, 1271, 1445, 2152
Sfr274I CTCGAG 1 cut(s) 2333
SfuI TTCGAA 3 cut(s) 510, 930, 1852
SinI GGWCC 2 cut(s) 758, 1475
SlaI CTCGAG 1 cut(s) 2333
SmiMI CAYNNNNRTG 5 cut(s) 1548, 2271, 2515, 2580, 2712
SmlI CTYRAG 3 cut(s) 380, 968, 2333
SmoI CTYRAG 3 cut(s) 380, 968, 2333
SsiI CCGC 3 cut(s) 332, 973, 2756
SspI AATATT 1 cut(s) 2142
SspMI CTAG 3 cut(s) 1028, 1409, 2787
StyD4I CCNGG 7 cut(s) 297, 627, 2455, 2486, 2598, 2667, 2806
StyI CCWWGG 2 cut(s) 253, 546
TaiI ACGT 7 cut(s) 835, 1018, 1233, 1489, 1563, 2622, 2776
TatI WGTACW 3 cut(s) 236, 339, 1462
TauI GCSGC 1 cut(s) 334
TfiI GAWTC 9 cut(s) 850, 877, 1147, 1238, 1412, 1661, 1795, 1946, 2107
TscAI CASTG 8 cut(s) 771, 928, 1293, 1572, 2049, 2095, 2377, 2891
TseFI GTSAC 5 cut(s) 86, 194, 1046, 1802, 2818
TseI GCWGC 4 cut(s) 37, 46, 1279, 2636
Tsp45I GTSAC 5 cut(s) 86, 194, 1046, 1802, 2818
TspDTI ATGAA 9 cut(s) 36, 50, 600, 975, 1053, 1150, 1178, 1352, 1707
TspGWI ACGGA 8 cut(s) 518, 1100, 1705, 1892, 2131, 2394, 2825, 2910
TspRI CASTG 8 cut(s) 771, 928, 1293, 1572, 2049, 2095, 2377, 2891
VneI GTGCAC 2 cut(s) 828, 1918
VpaK11BI GGWCC 2 cut(s) 758, 1475
XagI CCTNNNNNAGG 1 cut(s) 1055
XapI RAATTY 9 cut(s) 69, 284, 293, 512, 608, 2038, 2693, 2790, 2864
XbaI TCTAGA 2 cut(s) 1027, 1408
XceI RCATGY 5 cut(s) 314, 625, 1255, 1429, 2276
XcmI CCANNNNNNNNNTGG 2 cut(s) 1973, 2174
XhoI CTCGAG 1 cut(s) 2333
XmiI GTMKAC 3 cut(s) 376, 520, 1119
XmnI GAANNNNTTC 4 cut(s) 27, 936, 1665, 2129
XspI CTAG 3 cut(s) 1028, 1409, 2787
ZrmI AGTACT 2 cut(s) 341, 1464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.