Rh2AG310500

positive regulation of cell-substrate adhesion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000307
Physical Location & Seq
Forward (+)
39514132 .. 39534013
19882 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG310500.1

Sequence Viewer

Length: 4689 bp
ATGAGAAAGGTGGACAAGTGGAGGAAAGCTTTAGAGGATATAGCTGGTCTCTCCGGATGGCATGTGACAGAGGATAGGAGAGAATCAGAAGTTATTCAAGAAGTAGTTAATGAGATTCTAAATGTACTGAACAAAATGTTATCCGTTCCTGAAAGAGAGTTAATCGGAATGGATGCTCGTATAATAGAAATAGAGTCTCGCTTGGATCTAGAGTCAAATGATGTTCTTACCGTAGGGATTTGGGGGATGGGGGGAATCGGTCAACGTAGCAGGTTGTGGCTCGATGACAATGTACACAAGTATGAAGGCAGAAGGTCATGGCGTTTTGAGGATGCTCGTAGCGTGCTCATGGACAATACGGGGACAACTACTGTTGAAGGCTTATTCTTAAGCTTGCCTGAAAAAGAAGAAATGCCATTGGAAGATGACCCGTTCTTAACTATGGGCAACCTACGATTGCTGAAGATTTATAATGTAAATTTTCTGGATGTGCACTTCAGATATGTCTCTAAGAATTTACGACTTTTGGAATGGCACGAATGCCCTCTAGTATTATCTCTGCCATCTAGTTTTAAATCGGACAAGCTGGTTGAATTAAAGATGCCTAACAGCCGCATTGAACAACTATGGAATGAAACGCTTTCTCTGAAAATGCTTATACTCATGGATCTTTCTGACTGCAATTGGAGGAGATATCCGCCTCAAAAGGATTTGAGTATCATAAACTGTCGAAAACCAGAGGAGGATGAAATCTTTCCCGAACTCTATAAGTTTCGTTTGGGAAATCTGGAAGAACTCGATCTTTCCAACTGCCAACACTTGAAGAAGATCCCTGACTTGAATGGGGTTCCAAATCTTAAGAAATTGAACCTTGAAGGTTGTGAAAAATTATCAGAGGTTCACCCAACCATTGGGTGTCTCCAACATTTGGTGTTTCTGAATTTGAAAGGATGTGTAAATCTAGAGAGCCTTCCCAGTTCCATCAGCTTGAAGTCTCTAAACATGTTTGTTCTTTCGGGATGTTCAAAGCTGAAAGAGTTTCCAAACATTAAGGGACAAATGAACAATTTGTCACAACTGCATTTAGATGGGACGGCGTTAAGGCATCTGCGAATTCCGATGATGCATTTGAAAGGCCCAATTTTGATAAATCTTTCAGGCTGCAGGAACCTTTTGACTGTTCCAATCCTATTCAGTCTAAAATCTCTCAATCTATCACGGTGCTCAACTATATTCAAATTGCCACCGAGCCTGGCAAACATGGAACATTTGGAGGAGCTTGATGCCTCTGAAACTGCTATAACAGGATTACCCCAGTCCATTTTACTCTTGAAGAAACTTAAAGTGTTATCTTTCTGTGGATGCAAAGGTTTGCAATTGCCTAAATGGTTCTCGGATTTAAGCTCTTTGACATCATTAAATCTACGGAGGTGTAGTCTAGCAGAAGAAGTCCTTGATAGCCTCTACAGTTTATCAGCTCTGCAGATTTTGGATTTGAGTGAAAACAATCTTTCGATCATACCTAGTGGAATTGGTCGCTTATCCTCTTTGAAGCTATTGAATTTGAGTGAGAACAATTTTGACAATATACCAAATGAAATCGGTCACTTATCCTCTTTGCAGGTCTTAGATTTGAGTGAAAACAGCTTCATGAGTATACCTGATGAGAGCATCTCTCATCTTTCTGAGCTTACAGAACTACGCTTGTTTAGATGTAGTAAGCTACAGTCCTTGCCGAATAATCTTCCCTTCAATCTAAAACATGTCCATGCACAAGAATGTCCTATGTTGAAGAATAACGCAGATACTTTGACAATATATGCATCTGGAAAGGGGTTCTGTTTCATAAATTGCAGACAATCTGACCAGGATGATGGTCAGCCAAATCACCTCCCAGTTCCAGTTCCCAAAGACCATATTGAACTACTCTTTCCTATATACATTGAGGACCGAGTTTATGGCAAAAAACCATTTGAAATTCGTTTTCCACGTTCGTGGAGTACAGGACTGAGTGCCGGAATTCCAAATTCGTGGAGTCGTTGGAGAAATGGCCCTTCCGTGACAATCCCACTCTCCGATGGTAACAGTACGTGGATGGGACTTGCTCTTTTTGTTGTTTTTGATATCCTTGAGCAAGACATTTTCAACAAGAGCTGGGAATCGGAGGAGACAGTCTCTGATTTTCACACTGATGTTGGGCATGATACTTCCCTAGTTTTTCAAAACTTCATAGACTTCAGGACTGGGTCATATGGTCTTTGTTGCTATGAACCACGTGGTGGCCAATTTAGTGGGTTGTTCGATAAACCAAGTTCACGACTTCGAGCTTCAGTTTCAACAAAGAGACCAAATTTAAAAGTTAGAGGTTGTGGGATACATCTAATATCAGAGGAATATGCTGCAGAGTTTGTTAAAAGTATAGCAACTCAGACTACTAATTCAACTCAGAGTCATCTTGATTCCAATTTTGATCGACATTGCGAGGACATATTAGATGAGGAAACAACTGGTGCCCTGATAGAACAGGAATCTACTAATTCAACTTTCAATGAAGATAGCTGCAGCAAAGTTTACTCTAAGATCAAACTCAGAGGAGAGCTGTCGATACTCTATGAGGGAAGCAATGGACGTGAGAAGAGTTTCCACTTTTGCTTTCCTGCTTTCGTAATTTCAACCCTGCCTTGGTTCTTCCATCACCATGCAGGGGATGTAACATTGTGTTACATCACTAAAAACTTACTTGATGATCAGAGATGGGTGGGGTTAGAACTATATGTTCAATTTTCTCGGTGTACATCTACTTCGACATCTGGCAATAGTAGTTTTTTATTTTATGTTGATTTATGCTCTCATGATCATGGAAGTATGGTAATGCACGGATCCCTCAAGATAAGGAGTTGTGTTGGGACCTCAGATCAACTTGTTGTATTACATGTACCACGTGTTCATTTTCAACGACAGTTGAATCAATGTCAGGGTATCAGCGCATTGTTCAGAACCATTAATGCAGAAATGGAGGTCCAAGTGTGTGGAAGCCGTTTAGCATTCGAGCATGATTTGGAAGACTTGACCCATTCATTAACAGCAGCTGCCAGCACGTTGGGGCAACATGTCCTCACTCAACTATGTTCCCAGGCCCATCCTGTTGATCGGTGCAATGCAGAGGAAGCAGAAATGCCCATCAATTGCTGTTCCTGGTTTAGAAGAAGTACTGCACTTGTACTACCAGAACAAGCTCCTTCTTCTTCAATTGTGCGGCTGCGAAATCATAGATGCTATCTCCAGCAACAGCAAGGTTTTGGGGAGTCTGACCTTACCCAATTGGTCCTCTCCAGATCAGTAACATTACTCCACTCGAAAAGCCTTTTGGAAAACAGGGATAGGAACCATGAAAACGTTGCCGAAGAAGATAAATCGTTGGTGTTGGCTCGTCATCATGTACATATAATGGCTGAGACTCAACTTCAGGGAAGATATAGTTCACCATGGTGGAAGAGATGCCTGAAGTTATTGCTTCGACAGTCCAAGGTGGCTACTCTCAGTCTTTGTGGACACGCAATTTCAGCTTTCAAGAATTTTGATCCTTTCTCCCCATACAACATTATTTGTTTCTCTGACAAGGAAATTCCAGTGTGGTTCAAACATGAGATGTCGTATCAGATGTCTTCTAGGTCTAGGGTGGGAATCAAACTACCTCCAACATTGCACGAGGATGAGAACTGGAGAGGACTTGCTATATGTGTTGCCTTTGAAGTTCATGACCAGCGTCCAACTACCTCCCCAGTCAAACTTCTCTGTCACTTGAGAGCCAAGGACAACTATTGCTTGAATCCTATCCCTATGTGTTGCATCAATGAAGAGAAACACAAGTCGCTGCATCTTGGTAGATTCATTTGGCTAACCTACATTCCCCGTATTTTGCTACCGGAGTTCAGTGTGATTAGTGATGTAGAGGCCAGAATTTATGTTAGTTGCGGAGGCTTGACAGTAGAGAAGAGTGGTATACGTCTCTTGTACAGGCAAGAAGAGGAGAAGTTTGAGAACACAATAACCGAGTGCTGGACATCTTTCTTTGATAATCTGTCTTTCATCCGTCAACTTGTAGAAGCAGATGATCAAAATATTCAACCATGGATAAGACATGAACTTCCGATGCTTGAAGGTCATATCAAGGTCTTTGTACCGGATTTAATATATAATGCAATCCCCCCGTCTAATGAATTTCCGGAGTGGTTCGGGCATCGCATTGAGGACCCCTGGGATGCCAGCTTGGGCTGGCAATTCCCGTTACCACCACCTTTGAGTGACACAAATTGGATAGGATTAGCTCTCTTTGTATCATATCGTATTAGCAGAAATTATTTGCAGGAAAGTGTTTTGTACCCCTTTATTATAACATTGAAAACTGCGAAGAATGGTTTGTCCTCTCTCCATCGGTATCAAATGAGCAATGAAGAATTTGAGTTCCTAAAGCGCTGTTGTACTGTGCATCGTGAATTTTTCTGGCTCTCCTACATACCACGACGCTGGTTTCTACATCAGCTAAATGATGAGTCTGTCCTCATAGTTTTATCTGGTCTGAACCGCTGGACGCCGGACATGGTCTATCCCAGTTTTGTGTATGCGGATGAGGTGGAAGAGTTTAAGCAGCTCTGTTTCAATCTTCATCGACCCCCTGCCCAACAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04064 ko04115 ko04210 map04064 map04115 map04210
Pfam Domains
Protein Families
Death LRR_8 Peptidase_S68 ZU5

Protein Analysis

1562

Amino Acids

178.87

Weight (kDa)

6.04

Isoelectric Point (pI)

48.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 253 - 363 3.9e-06 Leucine-rich repeat region
LRR_4 PF12799 262 - 299 1.4e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 384 - 500 6.9e-12 Leucine-rich repeat region
LRR_14 PF23598 482 - 577 3.6e-12 Leucine-rich repeat region
LRR_8 PF13855 516 - 572 1.6e-07 Leucine rich repeat
C-JID PF20160 1205 - 1343 7.7e-07 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000307)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g16600 FvH4_1g16610 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16620 FvH4_1g16621 FvH4_1g16630 FvH4_1g16640 FvH4_1g16640 FvH4_1g16650 FvH4_1g16650 FvH4_3g27631 FvH4_4g11392 FvH4_4g11542
prunus_persica Prupe.4G224500_v2.0.a1 Prupe.4G226900_v2.0.a1 Prupe.4G227000_v2.0.a1
pyrus_communis pycom11g18180 pycom11g18210 pycom11g18230 pycom11g18270 pycom11g18350 pycom11g18360 pycom11g18370
rosa_chinensis RchiOBHm_Chr2g0106511 RchiOBHm_Chr2g0106541 RchiOBHm_Chr2g0106551 RchiOBHm_Chr2g0106571 RchiOBHm_Chr2g0124621 RchiOBHm_Chr6g0251591 RchiOBHm_Chr6g0251631 RchiOBHm_Chr6g0251641
rosa_laevigata RLG00000015443 RLG00000015444 RLG00000015458 RLG00000017510 RLG00000017511 RLG00000017512 RLG00000017515 RLG00000017516 RLG00000017517 RLG00000018809 RLG00000020934 RLG00000020935 RLG00000034092
rosa_multiflora Rmu_co8285777.1_g000001 Rmu_sc0000762.1_g000001 Rmu_sc0001872.1_g000006 Rmu_sc0005255.1_g000019 Rmu_sc0005597.1_g000006 Rmu_sc0012104.1_g000001 Rmu_sc0017105.1_g000011 Rmu_sc0022904.1_g000001 Rmu_ssc0000135.1_g000049 Rmu_ssc0000213.1_g000047
rosa_roxburghii Rroxscaffold_2G00092830 Rroxscaffold_2G00119790 Rroxscaffold_2G00137010 Rroxscaffold_2G00137030 Rroxscaffold_2G00137070 Rroxscaffold_7G00216560
rosa_rugosa Rorug02G0136100 Rorug02G0136200 Rorug02G0136300 Rorug02G0136400 Rorug02G0251800 Rorug02G0251800 Rorug02G0455500 Rorug02G0455600 Rorug02G0455700 Rorug05G0195300
rosa_samantha Rh2AG187400 Rh2AG187500 Rh2AG187600 Rh2AG310500 Rh2BG198200 Rh2BG198300 Rh2BG198400 Rh2BG198600 Rh2BG318900 Rh2BG534300 Rh2CG192400 Rh2CG192500 Rh2CG192600 Rh2CG297500 Rh2DG193500 Rh2DG193600 Rh2DG193800 Rh2DG334200 Rh2DG543100 Rh5AG280400 Rh5BG285800 Rh5BG285900 Rh5CG317900 Rh5CG318000 Rh5DG294600 Rh5DG294700 Rh6AG012200 Rh6AG012700 Rh6BG011200 Rh6BG011700
rosa_wichuraiana Rw0G009380 Rw2G014610 Rw2G014630 Rw2G014640 Rw2G014680 Rw2G025120 Rw2G043000 Rw5G026490 Rw6G001370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 471, 4394
Acc36I ACCTGC 2 cut(s) 261, 1612
AccB1I GGYRCC 1 cut(s) 2510
AccB7I CCANNNNNTGG 3 cut(s) 911, 928, 2279
AccI GTMKAC 2 cut(s) 1657, 4003
AccIII TCCGGA 2 cut(s) 53, 4225
AciI CCGC 6 cut(s) 613, 698, 3256, 3975, 4585, 4625
AclI AACGTT 1 cut(s) 3396
AclWI GGATC 6 cut(s) 213, 675, 823, 2874, 2887, 3575
AcoI YGGCCR 1 cut(s) 2281
AcuI CTGAAG 6 cut(s) 481, 482, 2221, 2313, 3449, 3524
AcvI CACGTG 2 cut(s) 2276, 2942
AcyI GRCGYC 1 cut(s) 4592
AdeI CACNNNGTG 1 cut(s) 2279
AfeI AGCGCT 1 cut(s) 4475
AfiI CCNNNNNNNGG 6 cut(s) 911, 928, 2279, 2682, 2704, 4059
AflII CTTAAG 2 cut(s) 388, 857
AflIII ACRYGT 5 cut(s) 1002, 1762, 2932, 2941, 3109
AjiI CACGTC 1 cut(s) 2630
AjnI CCWGG 5 cut(s) 1251, 1866, 3132, 3194, 4256
AjuI GAANNNNNNNTTGG 2 cut(s) 3350, 3382
AleI CACNNNNGTG 2 cut(s) 1993, 3487
Alw21I GWGCWC 3 cut(s) 348, 495, 1226
Alw44I GTGCAC 1 cut(s) 491
AlwI GGATC 6 cut(s) 213, 675, 823, 2874, 2887, 3575
AlwNI CAGNNNCTG 2 cut(s) 2177, 3089
Aor13HI TCCGGA 2 cut(s) 53, 4225
Aor51HI AGCGCT 1 cut(s) 4475
AoxI GGCC 5 cut(s) 1135, 2050, 2281, 3135, 3954
ApaLI GTGCAC 1 cut(s) 491
ApeKI GCWGC 9 cut(s) 1161, 2399, 2559, 2562, 3086, 3089, 3259, 3874, 4648
AseI ATTAAT 1 cut(s) 3003
Asp700I GAANNNNTTC 3 cut(s) 93, 753, 2639
AspLEI GCGC 2 cut(s) 2987, 4476
AspS9I GGNCC 8 cut(s) 1136, 1948, 2051, 2907, 3019, 3136, 3325, 4252
AsuHPI GGTGA 4 cut(s) 893, 1880, 2687, 3474
AvaII GGWCC 5 cut(s) 1948, 2907, 3019, 3325, 4252
BaeGI GKGCMC 2 cut(s) 495, 2515
BalI TGGCCA 1 cut(s) 2283
BamHI GGATCC 1 cut(s) 2879
BanI GGYRCC 1 cut(s) 2510
BarI GAAGNNNNNNTAC 2 cut(s) 2785, 2817
BauI CACGAG 1 cut(s) 3707
BbrPI CACGTG 2 cut(s) 2276, 2942
BbsI GAAGAC 2 cut(s) 3069, 3657
Bbv12I GWGCWC 3 cut(s) 348, 495, 1226
BbvI GCAGC 9 cut(s) 1148, 2386, 2546, 2574, 3076, 3098, 3246, 3861, 4660
BceAI ACGGC 2 cut(s) 1110, 3021
BciT130I CCWGG 5 cut(s) 1253, 1868, 3134, 3196, 4258
BciVI GTATCC 1 cut(s) 2367
BclI TGATCA 3 cut(s) 2746, 2854, 4114
BfaI CTAG 9 cut(s) 209, 548, 567, 962, 1439, 1524, 2213, 3669, 3675
BfmI CTRYAG 6 cut(s) 1162, 1465, 1481, 1724, 2400, 2560
BfoI RGCGCY 1 cut(s) 4477
BfrI CTTAAG 2 cut(s) 388, 857
BfuAI ACCTGC 2 cut(s) 261, 1612
BfuI GTATCC 1 cut(s) 2367
BmcAI AGTACT 1 cut(s) 3211
Bme1390I CCNGG 5 cut(s) 1253, 1868, 3134, 3196, 4258
Bme18I GGWCC 5 cut(s) 1948, 2907, 3019, 3325, 4252
BmgBI CACGTC 1 cut(s) 2630
BmgT120I GGNCC 8 cut(s) 1136, 1948, 2051, 2907, 3019, 3136, 3325, 4252
BmiI GGNNCC 7 cut(s) 849, 1169, 2512, 2881, 2908, 3386, 4254
BmrFI CCNGG 5 cut(s) 1253, 1868, 3134, 3196, 4258
BmrI ACTGGG 6 cut(s) 969, 1309, 1889, 2253, 3776, 4605
BmuI ACTGGG 6 cut(s) 969, 1309, 1889, 2253, 3776, 4605
BoxI GACNNNNGTC 1 cut(s) 3765
BpiI GAAGAC 2 cut(s) 3069, 3657
BplI GAGNNNNNCTC 6 cut(s) 1658, 1690, 1660, 1692, 2159, 2191
BpmI CTGGAG 3 cut(s) 3266, 3316, 3742
BpuEI CTTGAG 3 cut(s) 2150, 2870, 3823
BsaAI YACGTR 3 cut(s) 2091, 2276, 2942
BsaHI GRCGYC 1 cut(s) 4592
BsaI GGTCTC 2 cut(s) 53, 2338
BsaJI CCNNGG 8 cut(s) 2681, 3132, 3485, 3525, 3810, 4130, 4256, 4257
BsaWI WCCGGW 4 cut(s) 53, 3925, 4183, 4225
BsaXI ACNNNNNCTCC 2 cut(s) 1420, 1450
Bsc4I CCNNNNNNNGG 6 cut(s) 911, 928, 2279, 2682, 2704, 4059
Bse3DI GCAATG 5 cut(s) 2476, 2629, 3163, 3701, 4456
BseAI TCCGGA 2 cut(s) 53, 4225
BseBI CCWGG 5 cut(s) 1253, 1868, 3134, 3196, 4258
BseDI CCNNGG 8 cut(s) 2681, 3132, 3485, 3525, 3810, 4130, 4256, 4257
BseLI CCNNNNNNNGG 6 cut(s) 911, 928, 2279, 2682, 2704, 4059
BseMI GCAATG 5 cut(s) 2476, 2629, 3163, 3701, 4456
BseMII CTCAG 8 cut(s) 1677, 2000, 2441, 2459, 2602, 2925, 3444, 3553
BseRI GAGGAG 6 cut(s) 703, 755, 1289, 2180, 2607, 4043
BseSI GKGCMC 2 cut(s) 495, 2515
BseXI GCAGC 9 cut(s) 1148, 2386, 2546, 2574, 3076, 3098, 3246, 3861, 4660
BseYI CCCAGC 1 cut(s) 2154
BsgI GTGCAG 1 cut(s) 3198
BshFI GGCC 5 cut(s) 1137, 2052, 2283, 3137, 3956
BshNI GGYRCC 1 cut(s) 2510
BsiHKAI GWGCWC 3 cut(s) 348, 495, 1226
BsiSI CCGG 6 cut(s) 54, 2016, 3926, 4184, 4226, 4595
BslFI GGGAC 5 cut(s) 376, 1068, 1105, 2112, 2920
BslI CCNNNNNNNGG 6 cut(s) 911, 928, 2279, 2682, 2704, 4059
BsmBI CGTCTC 1 cut(s) 4013
BsmFI GGGAC 5 cut(s) 376, 1068, 1105, 2112, 2920
BsmI GAATGC 2 cut(s) 545, 3044
BsnI GGCC 5 cut(s) 1137, 2052, 2283, 3137, 3956
Bso31I GGTCTC 2 cut(s) 53, 2338
Bsp1286I GDGCHC 4 cut(s) 348, 495, 1226, 2515
Bsp13I TCCGGA 2 cut(s) 53, 4225
Bsp1407I TGTACA 4 cut(s) 292, 2792, 3439, 4014
Bsp19I CCATGG 2 cut(s) 3485, 4130
BspACI CCGC 6 cut(s) 613, 698, 3256, 3975, 4585, 4625
BspANI GGCC 5 cut(s) 1137, 2052, 2283, 3137, 3956
BspCNI CTCAG 8 cut(s) 1678, 2001, 2440, 2458, 2601, 2924, 3445, 3552
BspEI TCCGGA 2 cut(s) 53, 4225
BspHI TCATGA 3 cut(s) 1650, 2851, 3757
BspLI GGNNCC 7 cut(s) 849, 1169, 2512, 2881, 2908, 3386, 4254
BspMAI CTGCAG 4 cut(s) 1166, 1485, 2404, 2564
BspMI ACCTGC 2 cut(s) 261, 1612
BspPI GGATC 6 cut(s) 213, 675, 823, 2874, 2887, 3575
BspT107I GGYRCC 1 cut(s) 2510
BspTI CTTAAG 2 cut(s) 388, 857
BspTNI GGTCTC 2 cut(s) 53, 2338
BsrDI GCAATG 5 cut(s) 2476, 2629, 3163, 3701, 4456
BsrGI TGTACA 4 cut(s) 292, 2792, 3439, 4014
BssECI CCNNGG 8 cut(s) 2681, 3132, 3485, 3525, 3810, 4130, 4256, 4257
BssNAI GTATAC 2 cut(s) 1658, 4004
BssNI GRCGYC 1 cut(s) 4592
BssSI CACGAG 1 cut(s) 3707
BssT1I CCWWGG 5 cut(s) 2681, 3485, 3525, 3810, 4130
Bst1107I GTATAC 2 cut(s) 1658, 4004
Bst2BI CACGAG 1 cut(s) 3707
Bst2UI CCWGG 5 cut(s) 1253, 1868, 3134, 3196, 4258
Bst6I CTCTTC 6 cut(s) 2630, 3488, 3852, 3989, 4020, 4632
BstACI GRCGYC 1 cut(s) 4592
BstAFI CTTAAG 2 cut(s) 388, 857
BstAUI TGTACA 4 cut(s) 292, 2792, 3439, 4014
BstBAI YACGTR 3 cut(s) 2091, 2276, 2942
BstC8I GCNNGC 5 cut(s) 344, 395, 3094, 4267, 4277
BstDSI CCRYGG 2 cut(s) 3485, 4130
BstH2I RGCGCY 1 cut(s) 4477
BstHHI GCGC 2 cut(s) 2987, 4476
BstMWI GCNNNNNNNGC 2 cut(s) 3167, 3563
BstNI CCWGG 5 cut(s) 1253, 1868, 3134, 3196, 4258
BstNSI RCATGY 5 cut(s) 65, 1006, 1766, 2936, 3113
BstPAI GACNNNNGTC 1 cut(s) 3765
BstSCI CCNGG 5 cut(s) 1251, 1866, 3132, 3194, 4256
BstSFI CTRYAG 6 cut(s) 1162, 1465, 1481, 1724, 2400, 2560
BstSLI GKGCMC 2 cut(s) 495, 2515
BstV1I GCAGC 9 cut(s) 1148, 2386, 2546, 2574, 3076, 3098, 3246, 3861, 4660
BstV2I GAAGAC 2 cut(s) 3069, 3657
BstX2I RGATCY 4 cut(s) 205, 667, 828, 2879
BstXI CCANNNNNNTGG 7 cut(s) 1874, 1995, 2031, 2291, 3029, 3100, 4527
BstYI RGATCY 4 cut(s) 205, 667, 828, 2879
BstZ17I GTATAC 2 cut(s) 1658, 4004
BsuI GTATCC 1 cut(s) 2367
BsuRI GGCC 5 cut(s) 1137, 2052, 2283, 3137, 3956
BtgI CCRYGG 2 cut(s) 3485, 4130
BtgZI GCGATG 1 cut(s) 4226
BtrI CACGTC 1 cut(s) 2630
BtsIMutI CAGTG 3 cut(s) 2187, 3636, 3940
BveI ACCTGC 2 cut(s) 261, 1612
Cac8I GCNNGC 5 cut(s) 344, 395, 3094, 4267, 4277
CaiI CAGNNNCTG 2 cut(s) 2177, 3089
CciI TCATGA 3 cut(s) 1650, 2851, 3757
CfoI GCGC 2 cut(s) 2987, 4476
Cfr13I GGNCC 8 cut(s) 1136, 1948, 2051, 2907, 3019, 3136, 3325, 4252
CseI GACGC 3 cut(s) 3755, 4533, 4600
CspCI CAANNNNNGTGG 2 cut(s) 4281, 4316
DraI TTTAAA 2 cut(s) 574, 2355
DraIII CACNNNGTG 1 cut(s) 2279
EaeI YGGCCR 1 cut(s) 2281
Eam1104I CTCTTC 6 cut(s) 2630, 3488, 3852, 3989, 4020, 4632
EarI CTCTTC 6 cut(s) 2630, 3488, 3852, 3989, 4020, 4632
EciI GGCGGA 1 cut(s) 687
Eco130I CCWWGG 5 cut(s) 2681, 3485, 3525, 3810, 4130
Eco31I GGTCTC 2 cut(s) 53, 2338
Eco32I GATATC 2 cut(s) 695, 2125
Eco47I GGWCC 5 cut(s) 1948, 2907, 3019, 3325, 4252
Eco47III AGCGCT 1 cut(s) 4475
Eco57I CTGAAG 6 cut(s) 481, 482, 2221, 2313, 3449, 3524
Eco72I CACGTG 2 cut(s) 2276, 2942
EcoO109I RGGNCCY 2 cut(s) 2907, 4252
EcoRI GAATTC 2 cut(s) 1113, 2019
EcoRII CCWGG 5 cut(s) 1251, 1866, 3132, 3194, 4256
EcoRV GATATC 2 cut(s) 695, 2125
EcoT14I CCWWGG 5 cut(s) 2681, 3485, 3525, 3810, 4130
EcoT22I ATGCAT 2 cut(s) 1128, 1825
ErhI CCWWGG 5 cut(s) 2681, 3485, 3525, 3810, 4130
Esp3I CGTCTC 1 cut(s) 4013
FalI AAGNNNNNCTT 2 cut(s) 1437, 1469
FaqI GGGAC 5 cut(s) 376, 1068, 1105, 2112, 2920
FauNDI CATATG 1 cut(s) 2251
FbaI TGATCA 3 cut(s) 2746, 2854, 4114
FblI GTMKAC 2 cut(s) 1657, 4003
FspBI CTAG 9 cut(s) 209, 548, 567, 962, 1439, 1524, 2213, 3669, 3675
GlaI GCGC 2 cut(s) 2986, 4475
GsaI CCCAGC 1 cut(s) 2158
GsuI CTGGAG 3 cut(s) 3266, 3316, 3742
HaeII RGCGCY 1 cut(s) 4477
HaeIII GGCC 5 cut(s) 1137, 2052, 2283, 3137, 3956
HapII CCGG 6 cut(s) 54, 2016, 3926, 4184, 4226, 4595
HgaI GACGC 3 cut(s) 3755, 4533, 4600
HhaI GCGC 2 cut(s) 2987, 4476
Hin1I GRCGYC 1 cut(s) 4592
Hin6I GCGC 2 cut(s) 2985, 4474
HinP1I GCGC 2 cut(s) 2985, 4474
HincII GTYRAC 2 cut(s) 263, 4097
HindII GTYRAC 2 cut(s) 263, 4097
HindIII AAGCTT 2 cut(s) 27, 391
HpaII CCGG 6 cut(s) 54, 2016, 3926, 4184, 4226, 4595
HphI GGTGA 4 cut(s) 893, 1880, 2687, 3474
Hpy99I CGWCG 1 cut(s) 4527
HpyAV CCTTC 9 cut(s) 299, 306, 371, 869, 980, 1759, 2064, 3249, 4154
HpyCH4IV ACGT 9 cut(s) 265, 1990, 2090, 2275, 2629, 2941, 3098, 3396, 4006
HpyF10VI GCNNNNNNNGC 2 cut(s) 3167, 3563
HpySE526I ACGT 9 cut(s) 265, 1990, 2090, 2275, 2629, 2941, 3098, 3396, 4006
Hsp92I GRCGYC 1 cut(s) 4592
HspAI GCGC 2 cut(s) 2985, 4474
Kpn2I TCCGGA 2 cut(s) 53, 4225
Ksp22I TGATCA 3 cut(s) 2746, 2854, 4114
LmnI GCTCC 2 cut(s) 1276, 3241
Lsp1109I GCAGC 9 cut(s) 1148, 2386, 2546, 2574, 3076, 3098, 3246, 3861, 4660
MaeI CTAG 9 cut(s) 209, 548, 567, 962, 1439, 1524, 2213, 3669, 3675
MaeII ACGT 9 cut(s) 265, 1990, 2090, 2275, 2629, 2941, 3098, 3396, 4006
MfeI CAATTG 5 cut(s) 682, 1376, 3184, 3249, 3320
MflI RGATCY 4 cut(s) 205, 667, 828, 2879
MhlI GDGCHC 4 cut(s) 348, 495, 1226, 2515
MlsI TGGCCA 1 cut(s) 2283
MluNI TGGCCA 1 cut(s) 2283
MlyI GAGTC 7 cut(s) 203, 221, 2044, 2458, 3314, 3451, 4562
MmeI TCCRAC 5 cut(s) 831, 946, 2021, 3722, 3794
Mox20I TGGCCA 1 cut(s) 2283
Mph1103I ATGCAT 2 cut(s) 1128, 1825
MroI TCCGGA 2 cut(s) 53, 4225
MroXI GAANNNNTTC 3 cut(s) 93, 753, 2639
MscI TGGCCA 1 cut(s) 2283
Msp20I TGGCCA 1 cut(s) 2283
MspA1I CMGCKG 2 cut(s) 3089, 4587
MspCI CTTAAG 2 cut(s) 388, 857
MspI CCGG 6 cut(s) 54, 2016, 3926, 4184, 4226, 4595
MspR9I CCNGG 5 cut(s) 1253, 1868, 3134, 3196, 4258
MunI CAATTG 5 cut(s) 682, 1376, 3184, 3249, 3320
Mva1269I GAATGC 2 cut(s) 545, 3044
MvaI CCWGG 5 cut(s) 1253, 1868, 3134, 3196, 4258
MwoI GCNNNNNNNGC 2 cut(s) 3167, 3563
NcoI CCATGG 2 cut(s) 3485, 4130
NdeI CATATG 1 cut(s) 2251
NlaIV GGNNCC 7 cut(s) 849, 1169, 2512, 2881, 2908, 3386, 4254
NmuCI GTSAC 6 cut(s) 64, 1071, 1604, 2059, 3797, 4304
NsiI ATGCAT 2 cut(s) 1128, 1825
NspI RCATGY 5 cut(s) 65, 1006, 1766, 2936, 3113
OliI CACNNNNGTG 2 cut(s) 1993, 3487
PagI TCATGA 3 cut(s) 1650, 2851, 3757
PasI CCCWGGG 1 cut(s) 4257
PciI ACATGT 4 cut(s) 1002, 1762, 2932, 3109
PcsI WCGNNNNNNNCGW 1 cut(s) 1987
PctI GAATGC 2 cut(s) 545, 3044
PdmI GAANNNNTTC 3 cut(s) 93, 753, 2639
PflFI GACNNNGTC 2 cut(s) 2245, 4601
PflMI CCANNNNNTGG 3 cut(s) 911, 928, 2279
PleI GAGTC 7 cut(s) 202, 220, 2043, 2457, 3313, 3451, 4561
PmaCI CACGTG 2 cut(s) 2276, 2942
PmlI CACGTG 2 cut(s) 2276, 2942
PpsI GAGTC 7 cut(s) 202, 220, 2043, 2457, 3313, 3451, 4561
Ppu21I YACGTR 3 cut(s) 2091, 2276, 2942
PpuMI RGGWCCY 2 cut(s) 2907, 4252
PscI ACATGT 4 cut(s) 1002, 1762, 2932, 3109
PshAI GACNNNNGTC 1 cut(s) 3765
PshBI ATTAAT 1 cut(s) 3003
PsiI TTATAA 2 cut(s) 471, 4394
Psp1406I AACGTT 1 cut(s) 3396
Psp5II RGGWCCY 2 cut(s) 2907, 4252
Psp6I CCWGG 5 cut(s) 1251, 1866, 3132, 3194, 4256
PspCI CACGTG 2 cut(s) 2276, 2942
PspFI CCCAGC 1 cut(s) 2154
PspGI CCWGG 5 cut(s) 1251, 1866, 3132, 3194, 4256
PspN4I GGNNCC 7 cut(s) 849, 1169, 2512, 2881, 2908, 3386, 4254
PspPI GGNCC 8 cut(s) 1136, 1948, 2051, 2907, 3019, 3136, 3325, 4252
PspPPI RGGWCCY 2 cut(s) 2907, 4252
PsrI GAACNNNNNNTAC 2 cut(s) 2928, 2960
PstI CTGCAG 4 cut(s) 1166, 1485, 2404, 2564
PstNI CAGNNNCTG 2 cut(s) 2177, 3089
PsuI RGATCY 4 cut(s) 205, 667, 828, 2879
PsyI GACNNNGTC 2 cut(s) 2245, 4601
PvuII CAGCTG 1 cut(s) 3089
Sau96I GGNCC 8 cut(s) 1136, 1948, 2051, 2907, 3019, 3136, 3325, 4252
ScaI AGTACT 1 cut(s) 3211
SchI GAGTC 7 cut(s) 203, 221, 2044, 2458, 3314, 3451, 4562
ScrFI CCNGG 5 cut(s) 1253, 1868, 3134, 3196, 4258
SduI GDGCHC 4 cut(s) 348, 495, 1226, 2515
SfcI CTRYAG 6 cut(s) 1162, 1465, 1481, 1724, 2400, 2560
SinI GGWCC 5 cut(s) 1948, 2907, 3019, 3325, 4252
SmlI CTYRAG 5 cut(s) 388, 857, 2129, 2885, 3802
SmoI CTYRAG 5 cut(s) 388, 857, 2129, 2885, 3802
SsiI CCGC 6 cut(s) 613, 698, 3256, 3975, 4585, 4625
SspI AATATT 1 cut(s) 4123
SspMI CTAG 9 cut(s) 209, 548, 567, 962, 1439, 1524, 2213, 3669, 3675
StyD4I CCNGG 5 cut(s) 1251, 1866, 3132, 3194, 4256
StyI CCWWGG 5 cut(s) 2681, 3485, 3525, 3810, 4130
TaiI ACGT 9 cut(s) 268, 1993, 2093, 2278, 2632, 2944, 3101, 3399, 4009
TaqII GACCGA 3 cut(s) 248, 1592, 1965
TatI WGTACW 9 cut(s) 124, 292, 2000, 2792, 3209, 3220, 3439, 4014, 4481
TauI GCSGC 2 cut(s) 615, 3259
TscAI CASTG 3 cut(s) 2194, 3636, 3940
TseFI GTSAC 6 cut(s) 64, 1071, 1604, 2059, 3797, 4304
TseI GCWGC 9 cut(s) 1161, 2399, 2559, 2562, 3086, 3089, 3259, 3874, 4648
Tsp45I GTSAC 6 cut(s) 64, 1071, 1604, 2059, 3797, 4304
TspGWI ACGGA 5 cut(s) 133, 1441, 2047, 2892, 4082
TspRI CASTG 3 cut(s) 2194, 3636, 3940
Tth111I GACNNNGTC 2 cut(s) 2245, 4601
Van91I CCANNNNNTGG 3 cut(s) 911, 928, 2279
Vha464I CTTAAG 2 cut(s) 388, 857
VneI GTGCAC 1 cut(s) 491
VpaK11BI GGWCC 5 cut(s) 1948, 2907, 3019, 3325, 4252
VspI ATTAAT 1 cut(s) 3003
XbaI TCTAGA 2 cut(s) 208, 961
XceI RCATGY 5 cut(s) 65, 1006, 1766, 2936, 3113
XmiI GTMKAC 2 cut(s) 1657, 4003
XmnI GAANNNNTTC 3 cut(s) 93, 753, 2639
XspI CTAG 9 cut(s) 209, 548, 567, 962, 1439, 1524, 2213, 3669, 3675
ZrmI AGTACT 1 cut(s) 3211
Zsp2I ATGCAT 2 cut(s) 1128, 1825
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.