Rh1AG078200

Bifunctional purine biosynthesis protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0002841
Physical Location & Seq
Reverse (-)
13095313 .. 13100568
5256 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG078200.1

Sequence Viewer

Length: 1674 bp
ATGCTTGGTTTTTCTGCTGCTGCTCGTGCGGCTACATCACCCAGCACCAATCTTGTCTTGCTATTCTCCACCAGGCTGCCAATTACTGATTCTTCTTCTTTCTCTTCTTTTACGTCTTGCTCACTGAAGAACTCATCTTGGCTGCACACCAGTTGCCGACCAATTAATGCCGTGGCTGCTCAAGAGGCTCAATCCTCAGCCTCAGGTGATAGGCAGGCTCTGATATCTTTGTCAGACAAAAACAATCTTGCTTTCTTAGGGAATGAGCTTCAGAACTTGGGATATAAAATTGTTTCCACTGGAGGAACTGCATCTGCTTTAGAAAGTGCCGGAGTGTCTGTCACTAAAGTTGAAGAACTTACTTGCTTCCCGGAGATGTTCGATGGTCGTGTAAAAACTTTACACCCCAACATTCATGGGGGTATCCTTGCTAGAAGAGACCAAAAGCATCATATGGAAGCTCTTAGTAATCACGGAATTGGTACATTCGATGTGGTTGTGGTGAATTTATATCCCTTTTATGATAAAGTTACTTCAAAGGGAGGAATAGAATTTGAGGATGGAATCGAGAATATAGATATTGGTGGTCCTGCCATGATTAGAGCTGCTGCAAAGAATCACAAAGATGTCCTGGTGGTTGTTGATTCAGAAGACTATCATGCACTGCTAGAATATCTTAAAGCGGACAATGATGATCAACAATTCCGAAGAAACCTTGCGTGGAAGGCTTTTCAACATGTTGCTTCTTATGATTCTGCTGTTTCAGAGTGGCTTTGGAGGCAGACTACTGAAGATAAATTCCCTCCTACCTTAACAGTTCCTCTATTGCTCAAAAGTCCCCTTCGGTATGGTGAAAATCCTCATCAAAAGGCTGCATTCTATGTTGACAAGAGTCTTTCTGAGGTTAATGCTGGTGGCATTGCAACTGCTTTTCAACATCATGGGAAGGAGATGTCATATAATAACTATTTAGATGCTGATGCGGCTTGGAATTGTGTGTCAGAGTTCAGAAGTCCTACTTGTGTTGTTGTAAAACATACAAATCCTTGTGGTGTAGCATCACGTGATGATATACTTGACGCATACAGGCTTGCTGTCAAAGCAGATCCAGTGAGTGCATTTGGTGGCATTGTAGCTTTCAACATAGAGGTTGATGAGGCTCTTGCTAAAGAAATCCGTGAGTTTAGAAGCCCAACAGATGGTGAAACTCGGATGTTTTATGAGATTGTGGTTGCTCCCAAGTATTCAAAGAAAGGACTCGAAATCCTTCGTGGAAAATCAAAGACTCTGAGGATCCTCGAGGCAAGCAAAAATGAGAAAGGAAAACTTTCGCTTAGACAGGTTGGTGGTGGGTGGTTAGCCCAGGAGTCGGATGATTTAATTCCCCAAGATATCCAGTTTAATGTTGTGTCTAAGAAGTCTCCACAAGAAAGTGAGCTCAGTGATGCAGAGTTTGCATGGTTGTGTGTCAAACATGTCAAAAGCAATGCAATTGTAATAGCAAAGAATAACTGTATGTTGGGTATGGGAAGTGGACAGCCGAACCGTTTGGAGAGTTTAAGAATAGCATTGAGGAAAGCAGGAGAGGAGATCAAGGGTGCAGCTTTGGCTAGCGATGCCTTCTTCCCATTCGGTAATTATTACCTACTCATAAATCATTGTTCTGTTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
AICARFT_IMPCHas MGS

Protein Analysis

557

Amino Acids

61.02

Weight (kDa)

6.23

Isoelectric Point (pI)

44.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MGS PF02142 86 - 197 2.4e-20 MGS-like domain
AICARFT_IMPCHas PF01808 203 - 526 1.9e-114 AICARFT/IMPCHase bienzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1298
AccB7I CCANNNNNTGG 1 cut(s) 1199
AciI CCGC 3 cut(s) 29, 683, 983
AclWI GGATC 3 cut(s) 1100, 1288, 1301
AcsI RAATTY 3 cut(s) 505, 551, 797
AcuI CTGAAG 3 cut(s) 146, 254, 810
AcvI CACGTG 1 cut(s) 1064
AfaI GTAC 1 cut(s) 484
AfiI CCNNNNNNNGG 2 cut(s) 1199, 1369
AflIII ACRYGT 2 cut(s) 736, 1474
AgsI TTSAA 6 cut(s) 353, 537, 734, 935, 1141, 1248
AjnI CCWGG 3 cut(s) 71, 630, 1362
AjuI GAANNNNNNNTTGG 2 cut(s) 73, 105
AluBI AGCT 6 cut(s) 268, 461, 605, 1136, 1438, 1604
AluI AGCT 6 cut(s) 268, 461, 605, 1136, 1438, 1604
Alw21I GWGCWC 1 cut(s) 1440
Alw26I GTCTC 2 cut(s) 432, 1425
AlwI GGATC 3 cut(s) 1100, 1288, 1301
AlwNI CAGNNNCTG 1 cut(s) 220
Ama87I CYCGRG 1 cut(s) 1298
ApeKI GCWGC 9 cut(s) 17, 20, 76, 142, 176, 605, 608, 872, 1601
ApoI RAATTY 3 cut(s) 505, 551, 797
AseI ATTAAT 1 cut(s) 165
Asp700I GAANNNNTTC 2 cut(s) 1266, 1327
AspS9I GGNCC 1 cut(s) 587
AsuC2I CCSGG 1 cut(s) 371
AsuHPI GGTGA 5 cut(s) 30, 218, 514, 863, 1214
AsuNHI GCTAGC 1 cut(s) 1610
AvaI CYCGRG 1 cut(s) 1298
AvaII GGWCC 1 cut(s) 587
AxyI CCTNAGG 1 cut(s) 202
BamHI GGATCC 1 cut(s) 1293
BanII GRGCYC 1 cut(s) 1440
BauI CACGAG 1 cut(s) 24
BbrPI CACGTG 1 cut(s) 1064
BbsI GAAGAC 1 cut(s) 657
Bbv12I GWGCWC 1 cut(s) 1440
BbvCI CCTCAGC 1 cut(s) 196
BbvI GCAGC 9 cut(s) 4, 7, 63, 129, 163, 592, 595, 859, 1613
BccI CCATC 3 cut(s) 377, 554, 1193
BceAI ACGGC 1 cut(s) 155
BciT130I CCWGG 3 cut(s) 73, 632, 1364
BciVI GTATCC 1 cut(s) 434
BclI TGATCA 1 cut(s) 694
BcnI CCSGG 1 cut(s) 371
BcoDI GTCTC 2 cut(s) 432, 1425
BfaI CTAG 3 cut(s) 432, 668, 1611
BfuI GTATCC 1 cut(s) 434
Bme1390I CCNGG 4 cut(s) 73, 371, 632, 1364
Bme18I GGWCC 1 cut(s) 587
BmeT110I CYCGRG 1 cut(s) 1298
BmgT120I GGNCC 1 cut(s) 587
BmiI GGNNCC 1 cut(s) 1295
BmrFI CCNGG 4 cut(s) 73, 371, 632, 1364
BmsI GCATC 7 cut(s) 320, 457, 964, 970, 1067, 1435, 1606
BmtI GCTAGC 1 cut(s) 1614
BoxI GACNNNNGTC 1 cut(s) 891
BpiI GAAGAC 1 cut(s) 657
BpmI CTGGAG 1 cut(s) 321
Bpu10I CCTNAGC 1 cut(s) 196
BpuEI CTTGAG 1 cut(s) 165
BpuMI CCSGG 1 cut(s) 371
BsaAI YACGTR 1 cut(s) 1064
BsaI GGTCTC 1 cut(s) 432
BsaJI CCNNGG 2 cut(s) 171, 1362
BsaXI ACNNNNNCTCC 2 cut(s) 324, 354
Bsc4I CCNNNNNNNGG 2 cut(s) 1199, 1369
Bse1I ACTGG 4 cut(s) 150, 304, 1109, 1396
Bse21I CCTNAGG 1 cut(s) 202
Bse3DI GCAATG 2 cut(s) 918, 1492
BseBI CCWGG 3 cut(s) 73, 632, 1364
BseDI CCNNGG 2 cut(s) 171, 1362
BseGI GGATG 3 cut(s) 565, 1218, 1378
BseLI CCNNNNNNNGG 2 cut(s) 1199, 1369
BseMI GCAATG 2 cut(s) 918, 1492
BseMII CTCAG 5 cut(s) 210, 216, 891, 1280, 1453
BseNI ACTGG 4 cut(s) 150, 304, 1109, 1396
BseRI GAGGAG 1 cut(s) 1601
BseXI GCAGC 9 cut(s) 4, 7, 63, 129, 163, 592, 595, 859, 1613
BseYI CCCAGC 1 cut(s) 41
BsgI GTGCAG 2 cut(s) 128, 1620
BsiHKAI GWGCWC 1 cut(s) 1440
BsiHKCI CYCGRG 1 cut(s) 1298
BsiSI CCGG 2 cut(s) 330, 371
BslFI GGGAC 1 cut(s) 822
BslI CCNNNNNNNGG 2 cut(s) 1199, 1369
BsmAI GTCTC 2 cut(s) 432, 1425
BsmFI GGGAC 1 cut(s) 822
BsmI GAATGC 1 cut(s) 875
Bso31I GGTCTC 1 cut(s) 432
BsoBI CYCGRG 1 cut(s) 1298
Bsp1286I GDGCHC 1 cut(s) 1440
Bsp143I GATC 4 cut(s) 694, 1105, 1293, 1590
BspACI CCGC 3 cut(s) 29, 683, 983
BspCNI CTCAG 5 cut(s) 209, 215, 892, 1281, 1452
BspLI GGNNCC 1 cut(s) 1295
BspOI GCTAGC 1 cut(s) 1614
BspPI GGATC 3 cut(s) 1100, 1288, 1301
BspTNI GGTCTC 1 cut(s) 432
BsrDI GCAATG 2 cut(s) 918, 1492
BsrI ACTGG 4 cut(s) 150, 304, 1109, 1396
BssECI CCNNGG 2 cut(s) 171, 1362
BssMI GATC 4 cut(s) 694, 1105, 1293, 1590
BssSI CACGAG 1 cut(s) 24
Bst2BI CACGAG 1 cut(s) 24
Bst2UI CCWGG 3 cut(s) 73, 632, 1364
Bst4CI ACNGT 3 cut(s) 817, 1514, 1547
Bst6I CTCTTC 2 cut(s) 109, 430
BstAPI GCANNNNNTGC 1 cut(s) 1454
BstBAI YACGTR 1 cut(s) 1064
BstC8I GCNNGC 4 cut(s) 216, 1092, 1306, 1612
BstDEI CTNAG 9 cut(s) 196, 202, 256, 464, 900, 1289, 1334, 1413, 1439
BstDSI CCRYGG 1 cut(s) 171
BstF5I GGATG 3 cut(s) 565, 1218, 1378
BstKTI GATC 4 cut(s) 697, 1108, 1296, 1593
BstMAI GTCTC 2 cut(s) 432, 1425
BstMBI GATC 4 cut(s) 694, 1105, 1293, 1590
BstNI CCWGG 3 cut(s) 73, 632, 1364
BstNSI RCATGY 2 cut(s) 740, 1478
BstPAI GACNNNNGTC 1 cut(s) 891
BstSCI CCNGG 4 cut(s) 71, 369, 630, 1362
BstV1I GCAGC 9 cut(s) 4, 7, 63, 129, 163, 592, 595, 859, 1613
BstV2I GAAGAC 1 cut(s) 657
BstX2I RGATCY 2 cut(s) 1105, 1293
BstYI RGATCY 2 cut(s) 1105, 1293
Bsu36I CCTNAGG 1 cut(s) 202
BsuI GTATCC 1 cut(s) 434
BtgI CCRYGG 1 cut(s) 171
BtgZI GCGATG 1 cut(s) 1629
BtsCI GGATG 3 cut(s) 565, 1218, 1378
BtsI GCAGTG 1 cut(s) 662
BtsIMutI CAGTG 5 cut(s) 122, 297, 662, 1116, 1447
Cac8I GCNNGC 4 cut(s) 216, 1092, 1306, 1612
CaiI CAGNNNCTG 1 cut(s) 220
Cfr13I GGNCC 1 cut(s) 587
CseI GACGC 1 cut(s) 1088
Csp6I GTAC 1 cut(s) 483
CviAII CATG 7 cut(s) 416, 595, 659, 737, 941, 1458, 1475
CviQI GTAC 1 cut(s) 483
DdeI CTNAG 9 cut(s) 196, 202, 256, 464, 900, 1289, 1334, 1413, 1439
DpnI GATC 4 cut(s) 696, 1107, 1295, 1592
DpnII GATC 4 cut(s) 694, 1105, 1293, 1590
Eam1104I CTCTTC 2 cut(s) 109, 430
EarI CTCTTC 2 cut(s) 109, 430
Ecl136II GAGCTC 1 cut(s) 1438
Eco24I GRGCYC 1 cut(s) 1440
Eco31I GGTCTC 1 cut(s) 432
Eco32I GATATC 2 cut(s) 225, 1393
Eco47I GGWCC 1 cut(s) 587
Eco53kI GAGCTC 1 cut(s) 1438
Eco57I CTGAAG 3 cut(s) 146, 254, 810
Eco72I CACGTG 1 cut(s) 1064
Eco81I CCTNAGG 1 cut(s) 202
Eco88I CYCGRG 1 cut(s) 1298
EcoICRI GAGCTC 1 cut(s) 1438
EcoRII CCWGG 3 cut(s) 71, 630, 1362
EcoRV GATATC 2 cut(s) 225, 1393
EcoT38I GRGCYC 1 cut(s) 1440
FaeI CATG 7 cut(s) 419, 598, 662, 740, 944, 1461, 1478
FalI AAGNNNNNCTT 4 cut(s) 1003, 1035, 1311, 1343
FaqI GGGAC 1 cut(s) 822
FatI CATG 7 cut(s) 415, 594, 658, 736, 940, 1457, 1474
FauNDI CATATG 1 cut(s) 453
FbaI TGATCA 1 cut(s) 694
FokI GGATG 3 cut(s) 572, 1225, 1385
FriOI GRGCYC 1 cut(s) 1440
FspBI CTAG 3 cut(s) 432, 668, 1611
GsaI CCCAGC 1 cut(s) 45
GsuI CTGGAG 1 cut(s) 321
HapII CCGG 2 cut(s) 330, 371
HgaI GACGC 1 cut(s) 1088
Hin1II CATG 7 cut(s) 419, 598, 662, 740, 944, 1461, 1478
HincII GTYRAC 1 cut(s) 886
HindII GTYRAC 1 cut(s) 886
HinfI GANTC 9 cut(s) 89, 564, 616, 644, 752, 892, 1257, 1285, 1367
HpaII CCGG 2 cut(s) 330, 371
HphI GGTGA 5 cut(s) 30, 218, 514, 863, 1214
Hpy166II GTNNAC 2 cut(s) 886, 1535
Hpy188III TCNNGA 2 cut(s) 182, 568
Hpy8I GTNNAC 2 cut(s) 886, 1535
HpyAV CCTTC 5 cut(s) 718, 851, 940, 1277, 1630
HpyCH4III ACNGT 3 cut(s) 817, 1514, 1547
HpyCH4IV ACGT 2 cut(s) 113, 1063
HpyF3I CTNAG 9 cut(s) 196, 202, 256, 464, 900, 1289, 1334, 1413, 1439
HpySE526I ACGT 2 cut(s) 113, 1063
Hsp92II CATG 7 cut(s) 419, 598, 662, 740, 944, 1461, 1478
Ksp22I TGATCA 1 cut(s) 694
Kzo9I GATC 4 cut(s) 694, 1105, 1293, 1590
LmnI GCTCC 1 cut(s) 1240
Lsp1109I GCAGC 9 cut(s) 4, 7, 63, 129, 163, 592, 595, 859, 1613
LweI GCATC 7 cut(s) 320, 457, 964, 970, 1067, 1435, 1606
MaeI CTAG 3 cut(s) 432, 668, 1611
MaeII ACGT 2 cut(s) 113, 1063
MaeIII GTNAC 2 cut(s) 340, 529
MalI GATC 4 cut(s) 696, 1107, 1295, 1592
MboI GATC 4 cut(s) 694, 1105, 1293, 1590
MfeI CAATTG 1 cut(s) 1491
MflI RGATCY 2 cut(s) 1105, 1293
MhlI GDGCHC 1 cut(s) 1440
MlyI GAGTC 4 cut(s) 901, 1251, 1279, 1376
MmeI TCCRAC 1 cut(s) 1350
MroXI GAANNNNTTC 2 cut(s) 1266, 1327
MseI TTAA 8 cut(s) 165, 678, 812, 906, 1379, 1401, 1559, 1672
MslI CAYNNNNRTG 2 cut(s) 624, 1462
MspI CCGG 2 cut(s) 330, 371
MspR9I CCNGG 4 cut(s) 73, 371, 632, 1364
MunI CAATTG 1 cut(s) 1491
Mva1269I GAATGC 1 cut(s) 875
MvaI CCWGG 3 cut(s) 73, 632, 1364
NciI CCSGG 1 cut(s) 371
NdeI CATATG 1 cut(s) 453
NdeII GATC 4 cut(s) 694, 1105, 1293, 1590
NheI GCTAGC 1 cut(s) 1610
NlaIII CATG 7 cut(s) 419, 598, 662, 740, 944, 1461, 1478
NlaIV GGNNCC 1 cut(s) 1295
NmuCI GTSAC 1 cut(s) 340
NspI RCATGY 2 cut(s) 740, 1478
PaeR7I CTCGAG 1 cut(s) 1298
PciI ACATGT 2 cut(s) 736, 1474
PctI GAATGC 1 cut(s) 875
PdmI GAANNNNTTC 2 cut(s) 1266, 1327
PfeI GAWTC 5 cut(s) 89, 564, 616, 644, 752
PflMI CCANNNNNTGG 1 cut(s) 1199
PfoI TCCNGGA 1 cut(s) 369
PleI GAGTC 4 cut(s) 900, 1251, 1279, 1375
PmaCI CACGTG 1 cut(s) 1064
PmlI CACGTG 1 cut(s) 1064
PpsI GAGTC 4 cut(s) 900, 1251, 1279, 1375
Ppu21I YACGTR 1 cut(s) 1064
PscI ACATGT 2 cut(s) 736, 1474
PshAI GACNNNNGTC 1 cut(s) 891
PshBI ATTAAT 1 cut(s) 165
Psp124BI GAGCTC 1 cut(s) 1440
Psp6I CCWGG 3 cut(s) 71, 630, 1362
PspCI CACGTG 1 cut(s) 1064
PspFI CCCAGC 1 cut(s) 41
PspGI CCWGG 3 cut(s) 71, 630, 1362
PspN4I GGNNCC 1 cut(s) 1295
PspPI GGNCC 1 cut(s) 587
PspXI VCTCGAGB 1 cut(s) 1298
PstNI CAGNNNCTG 1 cut(s) 220
PsuI RGATCY 2 cut(s) 1105, 1293
RsaI GTAC 1 cut(s) 484
RsaNI GTAC 1 cut(s) 483
RseI CAYNNNNRTG 2 cut(s) 624, 1462
SacI GAGCTC 1 cut(s) 1440
SaqAI TTAA 8 cut(s) 165, 678, 812, 906, 1379, 1401, 1559, 1672
Sau3AI GATC 4 cut(s) 694, 1105, 1293, 1590
Sau96I GGNCC 1 cut(s) 587
SchI GAGTC 4 cut(s) 901, 1251, 1279, 1376
ScrFI CCNGG 4 cut(s) 73, 371, 632, 1364
SduI GDGCHC 1 cut(s) 1440
SfaNI GCATC 7 cut(s) 320, 457, 964, 970, 1067, 1435, 1606
Sfr274I CTCGAG 1 cut(s) 1298
SinI GGWCC 1 cut(s) 587
SlaI CTCGAG 1 cut(s) 1298
SmiMI CAYNNNNRTG 2 cut(s) 624, 1462
SmlI CTYRAG 2 cut(s) 180, 1298
SmoI CTYRAG 2 cut(s) 180, 1298
SsiI CCGC 3 cut(s) 29, 683, 983
SspMI CTAG 3 cut(s) 432, 668, 1611
SstI GAGCTC 1 cut(s) 1440
StyD4I CCNGG 4 cut(s) 71, 369, 630, 1362
TaaI ACNGT 3 cut(s) 817, 1514, 1547
TaiI ACGT 2 cut(s) 116, 1066
TaqI TCGA 5 cut(s) 381, 489, 567, 1260, 1299
TauI GCSGC 2 cut(s) 32, 986
TfiI GAWTC 5 cut(s) 89, 564, 616, 644, 752
Tru1I TTAA 8 cut(s) 165, 678, 812, 906, 1379, 1401, 1559, 1672
Tru9I TTAA 8 cut(s) 165, 678, 812, 906, 1379, 1401, 1559, 1672
TscAI CASTG 5 cut(s) 129, 304, 669, 1116, 1447
TseFI GTSAC 1 cut(s) 340
TseI GCWGC 9 cut(s) 17, 20, 76, 142, 176, 605, 608, 872, 1601
Tsp45I GTSAC 1 cut(s) 340
TspDTI ATGAA 1 cut(s) 404
TspGWI ACGGA 2 cut(s) 489, 1166
TspRI CASTG 5 cut(s) 129, 304, 669, 1116, 1447
Van91I CCANNNNNTGG 1 cut(s) 1199
VpaK11BI GGWCC 1 cut(s) 587
VspI ATTAAT 1 cut(s) 165
XapI RAATTY 3 cut(s) 505, 551, 797
XceI RCATGY 2 cut(s) 740, 1478
XhoI CTCGAG 1 cut(s) 1298
XmnI GAANNNNTTC 2 cut(s) 1266, 1327
XspI CTAG 3 cut(s) 432, 668, 1611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.