Rroxscaffold_2G00119760

Bifunctional purine biosynthesis protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
51773860 .. 51779984
6125 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00119760.1

Sequence Viewer

Length: 1785 bp
ATGCTTGGTTTGTCCGCTGCTGCTCCTGCGGCCATAACACCCAACACCAATCTTGTCCTGCTTTTCTCCACCAAACTCCCAATTACTCATTCTTCTTCTTCTTTATCTTCTTTCACTGCGTCTTGCTCACTCAGGAACTCATCTCGCACTTGTACTCCAATCAAAGCCATGGCTGCCCAACAGCCTCAATCCCCTGCCTCAGGTGATAGGCAGGCTCTGATATCTTTGTCAGACAAAAACAATCTTGCTTTCTTAGGGAACGGGCTTCAGAACTTGGGATATAAAATTGTTTCCACTGGAGGAACTGCATCTGCTTTAGAAAGTGCTGGGGTGTCTGTTACAAAAGTTGAAGAAATTACTTGCTTCCCGGAGATGCTCGATGGTCGTGTAAAAACTTTACACCCCAACATTCATGGGGGTATCCTTGCTAGAAGAGACCAAAAACATCATGTGGAAGCTCTTAATAATCACGGAATTGGTACATTCGATGTGGTTGTGGTGAATTTATATCCCTTTTATGATAAAGTTACTTCAAAGGGAGGAATAGAATTTGAGGATGGAATTGAGAATATAGATATTGGTGGTCCTGCCATGATTAGAGCTGCTGCAAAGAATCACAAAGATGTCCTGGTGGTTGTTGATTCAGAAGACTATCCTGCACTGCTAGAATATCTTAAAGCAGACAAGGATGATCAACAATTCCGAAGAAACCTTGCGTGGAAGGCTTTTCAACATGTTGCTTCTTATGATTCTGCTGTTTCAGAGTGGCTGTGGAGGCAGACTACCGAAGATAAATTCCCGCCTAGCTTAACAGTTCCTCTATTGCTCAAAAGTACCCTTCGGTATGGTGAAAATCCTCATCAAAAGGCTGCATTTTATGTTGATAAGAGTCTTTCTGAGGTTAATGCTGGTGGCATTGCAACTGCTATCCAACATCATGGGAAGGAGATGTCATATAATAACTATTTAGATGCTGATGCGGCTTGGAATTGTGTGTCAGAGTTCAGAAGTCCTACCTGTGTTGTTGTAAAGCATACAAATCCTTGTGGTGTAGCATCACGTGATGATATACTTGAAGCATACAGGCTTGCTGTCAAAGCAGATCCAGTGAGTGCATTTGGTGGCATTGTAGCTTTCAACATAGAGGTTGATGAGGTTCTTGCTAAAGAAATCCGAGAGTTTAGAAGCCCAACAGATGGTGAAACTCGGATGTTTTATGAGATTGTGGTTGCACCCAAGTATTCAAAGAAAGGTCTTGAAATTCTTCGTGGAAAATCAAAGACTCTGAGGATCCTCGAGGCAAGTAAAAATGAGAAAGGAAAACTTTCGCTTAGACAGGTTGGTGGTGGGTGGTTAGCCCAGGACTCGGATGATTTAAGTCCCCAAGATATCCAGTTTAATGTTGTGTCTAAGAAGTCTCCACAAGAAAGTGAGCTCAGTGATGCAGAGTTTGCATGGTTGTGTGTCAAACATGTCAAAAGCAATGCAATTGTAATAGCAAAGAATAACTGTATGTTGGGTATGGGAAGTGGACAGCCGAACCGTCGGGAGAGTTTAAGAATTGCACTGAGGAAAGCAGGAGAGGAGGTCAAGGGTGCAGCTTTGGCTAGCGATGCCTTCTTCCCATTCGCAGCTTGGAAAGATGCCGTGGAAGAAGCATGTGAAAGTGGAGTAAGTGTTATTGCAGAACCTGGTGGCAGTATAAGAGATGGAGATGCTATAGATTGCTGCAACAAGTATGGTGTTTCTCTTGTTTTCACTAATGTGAGGCACTTCAGGCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

594

Amino Acids

64.65

Weight (kDa)

6.45

Isoelectric Point (pI)

47.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MGS PF02142 85 - 196 1.7e-20 MGS-like domain
AICARFT_IMPCHas PF01808 202 - 525 6.9e-114 AICARFT/IMPCHase bienzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1295
AccB7I CCANNNNNTGG 1 cut(s) 1196
AciI CCGC 4 cut(s) 15, 29, 800, 980
AclWI GGATC 3 cut(s) 1097, 1285, 1298
AcoI YGGCCR 1 cut(s) 30
AcsI RAATTY 4 cut(s) 502, 548, 794, 1260
AcuI CTGAAG 2 cut(s) 251, 1759
AcvI CACGTG 1 cut(s) 1061
AfaI GTAC 3 cut(s) 154, 481, 835
AfiI CCNNNNNNNGG 3 cut(s) 200, 1196, 1366
AflIII ACRYGT 2 cut(s) 733, 1471
AgsI TTSAA 7 cut(s) 350, 534, 731, 1076, 1138, 1245, 1259
AjnI CCWGG 3 cut(s) 627, 1359, 1690
AjuI GAANNNNNNNTTGG 2 cut(s) 73, 105
AleI CACNNNNGTG 1 cut(s) 1763
AluBI AGCT 7 cut(s) 458, 602, 807, 1133, 1435, 1601, 1634
AluI AGCT 7 cut(s) 458, 602, 807, 1133, 1435, 1601, 1634
Alw21I GWGCWC 1 cut(s) 1437
Alw26I GTCTC 2 cut(s) 429, 1422
AlwI GGATC 3 cut(s) 1097, 1285, 1298
AlwNI CAGNNNCTG 2 cut(s) 217, 1691
Ama87I CYCGRG 1 cut(s) 1295
AoxI GGCC 1 cut(s) 30
ApeKI GCWGC 9 cut(s) 17, 20, 173, 602, 605, 869, 1598, 1631, 1728
ApoI RAATTY 4 cut(s) 502, 548, 794, 1260
Asp700I GAANNNNTTC 2 cut(s) 1263, 1324
AspS9I GGNCC 1 cut(s) 584
AsuC2I CCSGG 1 cut(s) 368
AsuHPI GGTGA 4 cut(s) 215, 511, 860, 1211
AsuNHI GCTAGC 1 cut(s) 1607
AvaI CYCGRG 1 cut(s) 1295
AvaII GGWCC 1 cut(s) 584
AxyI CCTNAGG 1 cut(s) 199
BamHI GGATCC 1 cut(s) 1290
BanII GRGCYC 1 cut(s) 1437
BbrPI CACGTG 1 cut(s) 1061
BbsI GAAGAC 1 cut(s) 654
Bbv12I GWGCWC 1 cut(s) 1437
BbvI GCAGC 9 cut(s) 4, 7, 160, 589, 592, 856, 1610, 1643, 1715
BccI CCATC 4 cut(s) 374, 551, 1190, 1703
BceAI ACGGC 1 cut(s) 1631
BciT130I CCWGG 3 cut(s) 629, 1361, 1692
BciVI GTATCC 1 cut(s) 431
BclI TGATCA 1 cut(s) 691
BcnI CCSGG 1 cut(s) 368
BcoDI GTCTC 2 cut(s) 429, 1422
BfaI CTAG 4 cut(s) 429, 665, 804, 1608
BfmI CTRYAG 1 cut(s) 1719
BfuI GTATCC 1 cut(s) 431
Bme1390I CCNGG 4 cut(s) 368, 629, 1361, 1692
Bme18I GGWCC 1 cut(s) 584
BmeT110I CYCGRG 1 cut(s) 1295
BmgT120I GGNCC 1 cut(s) 584
BmiI GGNNCC 1 cut(s) 1292
BmrFI CCNGG 4 cut(s) 368, 629, 1361, 1692
BmsI GCATC 9 cut(s) 317, 363, 961, 967, 1064, 1432, 1603, 1633, 1705
BmtI GCTAGC 1 cut(s) 1611
BpiI GAAGAC 1 cut(s) 654
BpmI CTGGAG 1 cut(s) 318
BpuMI CCSGG 1 cut(s) 368
BsaAI YACGTR 1 cut(s) 1061
BsaI GGTCTC 1 cut(s) 429
BsaJI CCNNGG 3 cut(s) 168, 1359, 1647
BsaXI ACNNNNNCTCC 6 cut(s) 139, 169, 1572, 1602, 1662, 1692
Bsc4I CCNNNNNNNGG 3 cut(s) 200, 1196, 1366
Bse1I ACTGG 3 cut(s) 301, 1106, 1393
Bse21I CCTNAGG 1 cut(s) 199
Bse3DI GCAATG 2 cut(s) 915, 1489
BseBI CCWGG 3 cut(s) 629, 1361, 1692
BseDI CCNNGG 3 cut(s) 168, 1359, 1647
BseGI GGATG 4 cut(s) 562, 694, 1215, 1375
BseLI CCNNNNNNNGG 3 cut(s) 200, 1196, 1366
BseMI GCAATG 2 cut(s) 915, 1489
BseMII CTCAG 6 cut(s) 145, 213, 888, 1277, 1450, 1559
BseNI ACTGG 3 cut(s) 301, 1106, 1393
BseRI GAGGAG 1 cut(s) 1598
BseXI GCAGC 9 cut(s) 4, 7, 160, 589, 592, 856, 1610, 1643, 1715
BseYI CCCAGC 1 cut(s) 326
BsgI GTGCAG 2 cut(s) 642, 1617
BshFI GGCC 1 cut(s) 32
BsiHKAI GWGCWC 1 cut(s) 1437
BsiHKCI CYCGRG 1 cut(s) 1295
BsiSI CCGG 1 cut(s) 368
BslFI GGGAC 1 cut(s) 1365
BslI CCNNNNNNNGG 3 cut(s) 200, 1196, 1366
BsmAI GTCTC 2 cut(s) 429, 1422
BsmFI GGGAC 1 cut(s) 1365
BsnI GGCC 1 cut(s) 32
Bso31I GGTCTC 1 cut(s) 429
BsoBI CYCGRG 1 cut(s) 1295
Bsp1286I GDGCHC 1 cut(s) 1437
Bsp143I GATC 3 cut(s) 691, 1102, 1290
Bsp19I CCATGG 1 cut(s) 168
BspACI CCGC 4 cut(s) 15, 29, 800, 980
BspANI GGCC 1 cut(s) 32
BspCNI CTCAG 6 cut(s) 144, 212, 889, 1278, 1449, 1560
BspLI GGNNCC 1 cut(s) 1292
BspOI GCTAGC 1 cut(s) 1611
BspPI GGATC 3 cut(s) 1097, 1285, 1298
BspTNI GGTCTC 1 cut(s) 429
BsrDI GCAATG 2 cut(s) 915, 1489
BsrI ACTGG 3 cut(s) 301, 1106, 1393
BssECI CCNNGG 3 cut(s) 168, 1359, 1647
BssMI GATC 3 cut(s) 691, 1102, 1290
BssT1I CCWWGG 1 cut(s) 168
Bst2UI CCWGG 3 cut(s) 629, 1361, 1692
Bst4CI ACNGT 3 cut(s) 814, 1511, 1544
Bst6I CTCTTC 1 cut(s) 427
BstAPI GCANNNNNTGC 1 cut(s) 1451
BstBAI YACGTR 1 cut(s) 1061
BstC8I GCNNGC 3 cut(s) 213, 1089, 1609
BstDEI CTNAG 9 cut(s) 131, 199, 253, 897, 1286, 1331, 1410, 1436, 1568
BstDSI CCRYGG 2 cut(s) 168, 1647
BstENI CCTNNNNNAGG 1 cut(s) 198
BstF5I GGATG 4 cut(s) 562, 694, 1215, 1375
BstKTI GATC 3 cut(s) 694, 1105, 1293
BstMAI GTCTC 2 cut(s) 429, 1422
BstMBI GATC 3 cut(s) 691, 1102, 1290
BstNI CCWGG 3 cut(s) 629, 1361, 1692
BstNSI RCATGY 3 cut(s) 737, 1475, 1662
BstSCI CCNGG 4 cut(s) 366, 627, 1359, 1690
BstSFI CTRYAG 1 cut(s) 1719
BstV1I GCAGC 9 cut(s) 4, 7, 160, 589, 592, 856, 1610, 1643, 1715
BstV2I GAAGAC 1 cut(s) 654
BstX2I RGATCY 2 cut(s) 1102, 1290
BstXI CCANNNNNNTGG 1 cut(s) 938
BstYI RGATCY 2 cut(s) 1102, 1290
Bsu36I CCTNAGG 1 cut(s) 199
BsuI GTATCC 1 cut(s) 431
BsuRI GGCC 1 cut(s) 32
BtgI CCRYGG 2 cut(s) 168, 1647
BtgZI GCGATG 1 cut(s) 1626
BtsCI GGATG 4 cut(s) 562, 694, 1215, 1375
BtsI GCAGTG 2 cut(s) 114, 659
BtsIMutI CAGTG 6 cut(s) 114, 294, 659, 1113, 1444, 1565
Cac8I GCNNGC 3 cut(s) 213, 1089, 1609
CaiI CAGNNNCTG 2 cut(s) 217, 1691
Cfr13I GGNCC 1 cut(s) 584
CseI GACGC 1 cut(s) 108
CsiI ACCWGGT 1 cut(s) 1690
Csp6I GTAC 3 cut(s) 153, 480, 834
CviAII CATG 9 cut(s) 169, 413, 449, 592, 734, 938, 1455, 1472, 1659
CviQI GTAC 3 cut(s) 153, 480, 834
DdeI CTNAG 9 cut(s) 131, 199, 253, 897, 1286, 1331, 1410, 1436, 1568
DpnI GATC 3 cut(s) 693, 1104, 1292
DpnII GATC 3 cut(s) 691, 1102, 1290
EaeI YGGCCR 1 cut(s) 30
Eam1104I CTCTTC 1 cut(s) 427
EarI CTCTTC 1 cut(s) 427
Ecl136II GAGCTC 1 cut(s) 1435
Eco130I CCWWGG 1 cut(s) 168
Eco24I GRGCYC 1 cut(s) 1437
Eco31I GGTCTC 1 cut(s) 429
Eco32I GATATC 2 cut(s) 222, 1390
Eco47I GGWCC 1 cut(s) 584
Eco53kI GAGCTC 1 cut(s) 1435
Eco57I CTGAAG 2 cut(s) 251, 1759
Eco72I CACGTG 1 cut(s) 1061
Eco81I CCTNAGG 1 cut(s) 199
Eco88I CYCGRG 1 cut(s) 1295
EcoICRI GAGCTC 1 cut(s) 1435
EcoNI CCTNNNNNAGG 1 cut(s) 198
EcoRII CCWGG 3 cut(s) 627, 1359, 1690
EcoRV GATATC 2 cut(s) 222, 1390
EcoT14I CCWWGG 1 cut(s) 168
EcoT38I GRGCYC 1 cut(s) 1437
ErhI CCWWGG 1 cut(s) 168
FaeI CATG 9 cut(s) 172, 416, 452, 595, 737, 941, 1458, 1475, 1662
FalI AAGNNNNNCTT 2 cut(s) 1308, 1340
FaqI GGGAC 1 cut(s) 1365
FatI CATG 9 cut(s) 168, 412, 448, 591, 733, 937, 1454, 1471, 1658
FauI CCCGC 1 cut(s) 807
FbaI TGATCA 1 cut(s) 691
FokI GGATG 4 cut(s) 569, 701, 1222, 1382
FriOI GRGCYC 1 cut(s) 1437
FspBI CTAG 4 cut(s) 429, 665, 804, 1608
GsaI CCCAGC 1 cut(s) 330
GsuI CTGGAG 1 cut(s) 318
HaeIII GGCC 1 cut(s) 32
HapII CCGG 1 cut(s) 368
HgaI GACGC 1 cut(s) 108
Hin1II CATG 9 cut(s) 172, 416, 452, 595, 737, 941, 1458, 1475, 1662
HinfI GANTC 6 cut(s) 613, 641, 749, 889, 1282, 1364
HpaII CCGG 1 cut(s) 368
HphI GGTGA 4 cut(s) 215, 511, 860, 1211
Hpy166II GTNNAC 1 cut(s) 1532
Hpy188III TCNNGA 3 cut(s) 133, 1256, 1547
Hpy8I GTNNAC 1 cut(s) 1532
Hpy99I CGWCG 1 cut(s) 1548
HpyAV CCTTC 4 cut(s) 715, 848, 937, 1627
HpyCH4III ACNGT 3 cut(s) 814, 1511, 1544
HpyCH4IV ACGT 1 cut(s) 1060
HpyF3I CTNAG 9 cut(s) 131, 199, 253, 897, 1286, 1331, 1410, 1436, 1568
HpySE526I ACGT 1 cut(s) 1060
Hsp92II CATG 9 cut(s) 172, 416, 452, 595, 737, 941, 1458, 1475, 1662
Ksp22I TGATCA 1 cut(s) 691
Kzo9I GATC 3 cut(s) 691, 1102, 1290
LmnI GCTCC 1 cut(s) 28
Lsp1109I GCAGC 9 cut(s) 4, 7, 160, 589, 592, 856, 1610, 1643, 1715
LweI GCATC 9 cut(s) 317, 363, 961, 967, 1064, 1432, 1603, 1633, 1705
MabI ACCWGGT 1 cut(s) 1690
MaeI CTAG 4 cut(s) 429, 665, 804, 1608
MaeII ACGT 1 cut(s) 1060
MaeIII GTNAC 2 cut(s) 337, 526
MalI GATC 3 cut(s) 693, 1104, 1292
MboI GATC 3 cut(s) 691, 1102, 1290
MfeI CAATTG 1 cut(s) 1488
MflI RGATCY 2 cut(s) 1102, 1290
MhlI GDGCHC 1 cut(s) 1437
MlyI GAGTC 3 cut(s) 898, 1276, 1358
MmeI TCCRAC 1 cut(s) 955
MroXI GAANNNNTTC 2 cut(s) 1263, 1324
MseI TTAA 8 cut(s) 462, 675, 809, 903, 1376, 1398, 1556, 1783
MslI CAYNNNNRTG 3 cut(s) 621, 1459, 1763
MspA1I CMGCKG 1 cut(s) 17
MspI CCGG 1 cut(s) 368
MspR9I CCNGG 4 cut(s) 368, 629, 1361, 1692
MunI CAATTG 1 cut(s) 1488
MvaI CCWGG 3 cut(s) 629, 1361, 1692
NciI CCSGG 1 cut(s) 368
NcoI CCATGG 1 cut(s) 168
NdeII GATC 3 cut(s) 691, 1102, 1290
NheI GCTAGC 1 cut(s) 1607
NlaIII CATG 9 cut(s) 172, 416, 452, 595, 737, 941, 1458, 1475, 1662
NlaIV GGNNCC 1 cut(s) 1292
NspI RCATGY 3 cut(s) 737, 1475, 1662
OliI CACNNNNGTG 1 cut(s) 1763
PaeR7I CTCGAG 1 cut(s) 1295
PciI ACATGT 2 cut(s) 733, 1471
PdmI GAANNNNTTC 2 cut(s) 1263, 1324
PfeI GAWTC 3 cut(s) 613, 641, 749
PflMI CCANNNNNTGG 1 cut(s) 1196
PfoI TCCNGGA 1 cut(s) 366
PleI GAGTC 3 cut(s) 897, 1276, 1358
PmaCI CACGTG 1 cut(s) 1061
PmlI CACGTG 1 cut(s) 1061
PpsI GAGTC 3 cut(s) 897, 1276, 1358
Ppu21I YACGTR 1 cut(s) 1061
PscI ACATGT 2 cut(s) 733, 1471
Psp124BI GAGCTC 1 cut(s) 1437
Psp6I CCWGG 3 cut(s) 627, 1359, 1690
PspCI CACGTG 1 cut(s) 1061
PspFI CCCAGC 1 cut(s) 326
PspGI CCWGG 3 cut(s) 627, 1359, 1690
PspN4I GGNNCC 1 cut(s) 1292
PspPI GGNCC 1 cut(s) 584
PspXI VCTCGAGB 1 cut(s) 1295
PstNI CAGNNNCTG 2 cut(s) 217, 1691
PsuI RGATCY 2 cut(s) 1102, 1290
RsaI GTAC 3 cut(s) 154, 481, 835
RsaNI GTAC 3 cut(s) 153, 480, 834
RseI CAYNNNNRTG 3 cut(s) 621, 1459, 1763
SacI GAGCTC 1 cut(s) 1437
SaqAI TTAA 8 cut(s) 462, 675, 809, 903, 1376, 1398, 1556, 1783
Sau3AI GATC 3 cut(s) 691, 1102, 1290
Sau96I GGNCC 1 cut(s) 584
SchI GAGTC 3 cut(s) 898, 1276, 1358
ScrFI CCNGG 4 cut(s) 368, 629, 1361, 1692
SduI GDGCHC 1 cut(s) 1437
SexAI ACCWGGT 1 cut(s) 1690
SfaNI GCATC 9 cut(s) 317, 363, 961, 967, 1064, 1432, 1603, 1633, 1705
SfcI CTRYAG 1 cut(s) 1719
Sfr274I CTCGAG 1 cut(s) 1295
SinI GGWCC 1 cut(s) 584
SlaI CTCGAG 1 cut(s) 1295
SmiMI CAYNNNNRTG 3 cut(s) 621, 1459, 1763
SmlI CTYRAG 1 cut(s) 1295
SmoI CTYRAG 1 cut(s) 1295
SsiI CCGC 4 cut(s) 15, 29, 800, 980
SspMI CTAG 4 cut(s) 429, 665, 804, 1608
SstI GAGCTC 1 cut(s) 1437
StyD4I CCNGG 4 cut(s) 366, 627, 1359, 1690
StyI CCWWGG 1 cut(s) 168
TaaI ACNGT 3 cut(s) 814, 1511, 1544
TaiI ACGT 1 cut(s) 1063
TaqI TCGA 3 cut(s) 378, 486, 1296
TatI WGTACW 1 cut(s) 152
TauI GCSGC 2 cut(s) 32, 983
TfiI GAWTC 3 cut(s) 613, 641, 749
Tru1I TTAA 8 cut(s) 462, 675, 809, 903, 1376, 1398, 1556, 1783
Tru9I TTAA 8 cut(s) 462, 675, 809, 903, 1376, 1398, 1556, 1783
TscAI CASTG 6 cut(s) 121, 301, 666, 1113, 1444, 1572
TseI GCWGC 9 cut(s) 17, 20, 173, 602, 605, 869, 1598, 1631, 1728
TspDTI ATGAA 1 cut(s) 401
TspGWI ACGGA 1 cut(s) 486
TspRI CASTG 6 cut(s) 121, 301, 666, 1113, 1444, 1572
Van91I CCANNNNNTGG 1 cut(s) 1196
VpaK11BI GGWCC 1 cut(s) 584
XagI CCTNNNNNAGG 1 cut(s) 198
XapI RAATTY 4 cut(s) 502, 548, 794, 1260
XceI RCATGY 3 cut(s) 737, 1475, 1662
XcmI CCANNNNNNNNNTGG 1 cut(s) 1632
XhoI CTCGAG 1 cut(s) 1295
XmnI GAANNNNTTC 2 cut(s) 1263, 1324
XspI CTAG 4 cut(s) 429, 665, 804, 1608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.