Rroxscaffold_7G00201340

Bifunctional purine biosynthesis protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0002841
Physical Location & Seq
Forward (+)
49018037 .. 49018378
342 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_7G00201340.1

Sequence Viewer

Length: 342 bp
ATGGAAGCTCTTGGTAATCACGGATTTGGTACATTCGATGTGGTTGTGGTGAATTTATATCCCTTTTATGATAAAGTTACTTCAAAGGGAGGAATAGAATTTGAGGATGGAATCGAGAATATAGATATTGGTGGTCCCGCCATGATTAGAGCGCCGCAAAGAATCACAAAGATGTCCTGGTGGTTGTTGATTCGAGAAGACTATCATGCACTGCTAGAATATCTTAAAGCGGACAATGATGATCAACACTTCCGAAGAAACCTTGCATGGAAGTCTTTTCAACATGATGCTTCTTATGATTCTGCTGTTTCGCAGTGGCTTTGGAGGCGAATGCGAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko00670 ko01100 ko01110 ko01130 ko01523 map00230 map00670 map01100 map01110 map01130 map01523
Pfam Domains
Protein Families
AICARFT_IMPCHas MGS

Protein Analysis

113

Amino Acids

13.32

Weight (kDa)

6.05

Isoelectric Point (pI)

66.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AICARFT_IMPCHas PF01808 65 - 109 4.1e-07 AICARFT/IMPCHase bienzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 138, 155, 230
AcsI RAATTY 2 cut(s) 52, 98
AfaI GTAC 1 cut(s) 31
AgsI TTSAA 2 cut(s) 84, 281
AjnI CCWGG 1 cut(s) 176
AluBI AGCT 1 cut(s) 8
AluI AGCT 1 cut(s) 8
ApoI RAATTY 2 cut(s) 52, 98
AspLEI GCGC 1 cut(s) 154
AspS9I GGNCC 1 cut(s) 134
AsuHPI GGTGA 1 cut(s) 61
AvaII GGWCC 1 cut(s) 134
BbsI GAAGAC 1 cut(s) 204
BccI CCATC 1 cut(s) 101
BciT130I CCWGG 1 cut(s) 178
BclI TGATCA 1 cut(s) 241
BfaI CTAG 1 cut(s) 215
BfoI RGCGCY 1 cut(s) 155
BisI GCNGC 1 cut(s) 155
BlsI GCNGC 1 cut(s) 156
Bme1390I CCNGG 1 cut(s) 178
Bme18I GGWCC 1 cut(s) 134
BmgT120I GGNCC 1 cut(s) 134
BmiI GGNNCC 1 cut(s) 136
BmrFI CCNGG 1 cut(s) 178
BmsI GCATC 1 cut(s) 277
BpiI GAAGAC 1 cut(s) 204
BseBI CCWGG 1 cut(s) 178
BseGI GGATG 1 cut(s) 112
BslFI GGGAC 1 cut(s) 120
BsmFI GGGAC 1 cut(s) 120
BsmI GAATGC 1 cut(s) 336
Bsp143I GATC 1 cut(s) 241
BspACI CCGC 3 cut(s) 138, 155, 230
BspLI GGNNCC 1 cut(s) 136
BssMI GATC 1 cut(s) 241
Bst2UI CCWGG 1 cut(s) 178
BstF5I GGATG 1 cut(s) 112
BstH2I RGCGCY 1 cut(s) 155
BstHHI GCGC 1 cut(s) 154
BstKTI GATC 1 cut(s) 244
BstMBI GATC 1 cut(s) 241
BstMWI GCNNNNNNNGC 1 cut(s) 325
BstNI CCWGG 1 cut(s) 178
BstSCI CCNGG 1 cut(s) 176
BstV2I GAAGAC 1 cut(s) 204
BtsCI GGATG 1 cut(s) 112
BtsI GCAGTG 2 cut(s) 209, 320
BtsIMutI CAGTG 2 cut(s) 209, 320
CfoI GCGC 1 cut(s) 154
Cfr13I GGNCC 1 cut(s) 134
Csp6I GTAC 1 cut(s) 30
CviAII CATG 4 cut(s) 142, 206, 267, 284
CviJI RGCY 2 cut(s) 8, 319
CviKI_1 RGCY 2 cut(s) 8, 319
CviQI GTAC 1 cut(s) 30
DpnI GATC 1 cut(s) 243
DpnII GATC 1 cut(s) 241
Eco47I GGWCC 1 cut(s) 134
EcoRII CCWGG 1 cut(s) 176
FaeI CATG 4 cut(s) 145, 209, 270, 287
FaiI YATR 8 cut(s) 58, 69, 122, 143, 207, 268, 285, 297
FaqI GGGAC 1 cut(s) 120
FatI CATG 4 cut(s) 141, 205, 266, 283
FauI CCCGC 1 cut(s) 145
FbaI TGATCA 1 cut(s) 241
Fnu4HI GCNGC 1 cut(s) 155
FokI GGATG 1 cut(s) 119
Fsp4HI GCNGC 1 cut(s) 155
FspBI CTAG 1 cut(s) 215
GlaI GCGC 1 cut(s) 153
GluI GCNGC 1 cut(s) 155
HaeII RGCGCY 1 cut(s) 155
HhaI GCGC 1 cut(s) 154
Hin1II CATG 4 cut(s) 145, 209, 270, 287
Hin6I GCGC 1 cut(s) 152
HinP1I GCGC 1 cut(s) 152
HinfI GANTC 4 cut(s) 111, 162, 190, 299
HphI GGTGA 1 cut(s) 61
Hpy188I TCNGA 1 cut(s) 254
Hpy188III TCNNGA 2 cut(s) 115, 194
HpyCH4V TGCA 2 cut(s) 209, 266
HpyF10VI GCNNNNNNNGC 1 cut(s) 325
Hsp92II CATG 4 cut(s) 145, 209, 270, 287
HspAI GCGC 1 cut(s) 152
Ksp22I TGATCA 1 cut(s) 241
Kzo9I GATC 1 cut(s) 241
LpnPI CCDG 2 cut(s) 163, 190
LweI GCATC 1 cut(s) 277
MaeI CTAG 1 cut(s) 215
MaeIII GTNAC 1 cut(s) 76
MalI GATC 1 cut(s) 243
MboI GATC 1 cut(s) 241
MboII GAAGA 2 cut(s) 209, 267
MluCI AATT 2 cut(s) 52, 98
MnlI CCTC 3 cut(s) 83, 97, 318
MseI TTAA 1 cut(s) 225
MslI CAYNNNNRTG 1 cut(s) 170
MspR9I CCNGG 1 cut(s) 178
Mva1269I GAATGC 1 cut(s) 336
MvaI CCWGG 1 cut(s) 178
MwoI GCNNNNNNNGC 1 cut(s) 325
NdeII GATC 1 cut(s) 241
NlaIII CATG 4 cut(s) 145, 209, 270, 287
NlaIV GGNNCC 1 cut(s) 136
PctI GAATGC 1 cut(s) 336
PfeI GAWTC 4 cut(s) 111, 162, 190, 299
PkrI GCNGC 1 cut(s) 156
Psp6I CCWGG 1 cut(s) 176
PspGI CCWGG 1 cut(s) 176
PspN4I GGNNCC 1 cut(s) 136
PspPI GGNCC 1 cut(s) 134
RsaI GTAC 1 cut(s) 31
RsaNI GTAC 1 cut(s) 30
RseI CAYNNNNRTG 1 cut(s) 170
SaqAI TTAA 1 cut(s) 225
SatI GCNGC 1 cut(s) 155
Sau3AI GATC 1 cut(s) 241
Sau96I GGNCC 1 cut(s) 134
ScrFI CCNGG 1 cut(s) 178
SetI ASST 2 cut(s) 10, 264
SfaNI GCATC 1 cut(s) 277
SinI GGWCC 1 cut(s) 134
SmiMI CAYNNNNRTG 1 cut(s) 170
Sse9I AATT 2 cut(s) 52, 98
SsiI CCGC 3 cut(s) 138, 155, 230
SspMI CTAG 1 cut(s) 215
StyD4I CCNGG 1 cut(s) 176
TaqI TCGA 3 cut(s) 36, 114, 193
TasI AATT 2 cut(s) 52, 98
TauI GCSGC 1 cut(s) 157
TfiI GAWTC 4 cut(s) 111, 162, 190, 299
Tru1I TTAA 1 cut(s) 225
Tru9I TTAA 1 cut(s) 225
TscAI CASTG 2 cut(s) 216, 320
TspGWI ACGGA 1 cut(s) 36
TspRI CASTG 2 cut(s) 216, 320
VpaK11BI GGWCC 1 cut(s) 134
XapI RAATTY 2 cut(s) 52, 98
XspI CTAG 1 cut(s) 215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.