Splicing factor 3B subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0331871 RchiOBHm_Chr2g0148651 RchiOBHm_Chr2g0148731 RchiOBHm_Chr5g0061171 RchiOBHm_Chr6g0277941 |
| rosa_laevigata | RLG00000003434 RLG00000014192 RLG00000017787 RLG00000030135 RLG00000036316 |
| rosa_multiflora | Rmu_co8468775.1_g000001 Rmu_sc0000048.1_g000030 Rmu_sc0004598.1_g000014 Rmu_ssc0000128.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00006340 Rroxscaffold_1G00036970 |
| rosa_rugosa | Rorug06G0025900 |
| rosa_samantha | Rh1BG071400 Rh1CG190300 Rh2CG481700 Rh2DG488600 Rh4AG166800 Rh7BG358600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 58 |
| AluBI | AGCT | 1 cut(s) | 48 |
| AluI | AGCT | 1 cut(s) | 48 |
| AxyI | CCTNAGG | 1 cut(s) | 20 |
| Bse1I | ACTGG | 1 cut(s) | 66 |
| Bse21I | CCTNAGG | 1 cut(s) | 20 |
| BseMII | CTCAG | 1 cut(s) | 34 |
| BseNI | ACTGG | 1 cut(s) | 66 |
| BspCNI | CTCAG | 1 cut(s) | 33 |
| BsrI | ACTGG | 1 cut(s) | 66 |
| BstDEI | CTNAG | 1 cut(s) | 20 |
| Bsu36I | CCTNAGG | 1 cut(s) | 20 |
| CviJI | RGCY | 1 cut(s) | 48 |
| CviKI_1 | RGCY | 1 cut(s) | 48 |
| DdeI | CTNAG | 1 cut(s) | 20 |
| Eco81I | CCTNAGG | 1 cut(s) | 20 |
| FaiI | YATR | 1 cut(s) | 87 |
| HinfI | GANTC | 1 cut(s) | 129 |
| Hpy188I | TCNGA | 1 cut(s) | 143 |
| Hpy188III | TCNNGA | 2 cut(s) | 13, 133 |
| HpyAV | CCTTC | 1 cut(s) | 122 |
| HpyF3I | CTNAG | 1 cut(s) | 20 |
| LmnI | GCTCC | 1 cut(s) | 45 |
| LpnPI | CCDG | 2 cut(s) | 7, 47 |
| MboII | GAAGA | 1 cut(s) | 43 |
| MluCI | AATT | 2 cut(s) | 34, 102 |
| MnlI | CCTC | 1 cut(s) | 29 |
| MseI | TTAA | 1 cut(s) | 78 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 11 |
| PfeI | GAWTC | 1 cut(s) | 129 |
| SaqAI | TTAA | 1 cut(s) | 78 |
| SetI | ASST | 3 cut(s) | 26, 50, 114 |
| SgeI | CNNG | 6 cut(s) | 25, 34, 74, 79, 131, 137 |
| Sse9I | AATT | 2 cut(s) | 34, 102 |
| TaqI | TCGA | 1 cut(s) | 14 |
| TasI | AATT | 2 cut(s) | 34, 102 |
| TfiI | GAWTC | 1 cut(s) | 129 |
| Tru1I | TTAA | 1 cut(s) | 78 |
| Tru9I | TTAA | 1 cut(s) | 78 |
| TspDTI | ATGAA | 1 cut(s) | 104 |
| TspGWI | ACGGA | 1 cut(s) | 141 |