Splicing factor 3B subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0331871 RchiOBHm_Chr2g0148651 RchiOBHm_Chr2g0148731 RchiOBHm_Chr5g0061171 RchiOBHm_Chr6g0277941 |
| rosa_laevigata | RLG00000003434 RLG00000014192 RLG00000017787 RLG00000030135 RLG00000036316 |
| rosa_multiflora | Rmu_co8468775.1_g000001 Rmu_sc0000048.1_g000030 Rmu_sc0004598.1_g000014 Rmu_ssc0000128.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00006340 Rroxscaffold_1G00036970 |
| rosa_rugosa | Rorug06G0025900 |
| rosa_samantha | Rh1BG071400 Rh1CG190300 Rh2CG481700 Rh2DG488600 Rh4AG166800 Rh7BG358600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 233 |
| AcuI | CTGAAG | 1 cut(s) | 325 |
| AgeI | ACCGGT | 1 cut(s) | 62 |
| AgsI | TTSAA | 3 cut(s) | 59, 133, 190 |
| AluBI | AGCT | 4 cut(s) | 49, 195, 286, 339 |
| AluI | AGCT | 4 cut(s) | 49, 195, 286, 339 |
| ApoI | RAATTY | 1 cut(s) | 233 |
| AsiGI | ACCGGT | 1 cut(s) | 62 |
| AspS9I | GGNCC | 1 cut(s) | 65 |
| AvaII | GGWCC | 1 cut(s) | 65 |
| BclI | TGATCA | 1 cut(s) | 279 |
| BfaI | CTAG | 2 cut(s) | 336, 352 |
| Bme18I | GGWCC | 1 cut(s) | 65 |
| BmgT120I | GGNCC | 1 cut(s) | 65 |
| BmsI | GCATC | 1 cut(s) | 142 |
| BpuEI | CTTGAG | 1 cut(s) | 164 |
| BsaWI | WCCGGW | 1 cut(s) | 62 |
| Bse118I | RCCGGY | 1 cut(s) | 62 |
| BshTI | ACCGGT | 1 cut(s) | 62 |
| BsiSI | CCGG | 1 cut(s) | 63 |
| Bsp143I | GATC | 1 cut(s) | 279 |
| BsrFI | RCCGGY | 1 cut(s) | 62 |
| BssAI | RCCGGY | 1 cut(s) | 62 |
| BssMI | GATC | 1 cut(s) | 279 |
| BstC8I | GCNNGC | 1 cut(s) | 258 |
| BstKTI | GATC | 1 cut(s) | 282 |
| BstMBI | GATC | 1 cut(s) | 279 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 257 |
| Cac8I | GCNNGC | 1 cut(s) | 258 |
| Cfr10I | RCCGGY | 1 cut(s) | 62 |
| Cfr13I | GGNCC | 1 cut(s) | 65 |
| CspAI | ACCGGT | 1 cut(s) | 62 |
| CviJI | RGCY | 4 cut(s) | 49, 195, 286, 339 |
| CviKI_1 | RGCY | 4 cut(s) | 49, 195, 286, 339 |
| DpnI | GATC | 1 cut(s) | 281 |
| DpnII | GATC | 1 cut(s) | 279 |
| Eco47I | GGWCC | 1 cut(s) | 65 |
| Eco57I | CTGAAG | 1 cut(s) | 325 |
| FaiI | YATR | 5 cut(s) | 84, 164, 254, 278, 319 |
| FbaI | TGATCA | 1 cut(s) | 279 |
| FspBI | CTAG | 2 cut(s) | 336, 352 |
| HapII | CCGG | 1 cut(s) | 63 |
| HindIII | AAGCTT | 1 cut(s) | 284 |
| HinfI | GANTC | 3 cut(s) | 7, 202, 345 |
| HpaII | CCGG | 1 cut(s) | 63 |
| Hpy188I | TCNGA | 4 cut(s) | 21, 140, 226, 344 |
| HpyAV | CCTTC | 1 cut(s) | 119 |
| HpyCH4V | TGCA | 1 cut(s) | 256 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 257 |
| Ksp22I | TGATCA | 1 cut(s) | 279 |
| Kzo9I | GATC | 1 cut(s) | 279 |
| LmnI | GCTCC | 3 cut(s) | 22, 46, 200 |
| LpnPI | CCDG | 4 cut(s) | 76, 81, 212, 242 |
| LweI | GCATC | 1 cut(s) | 142 |
| MaeI | CTAG | 2 cut(s) | 336, 352 |
| MalI | GATC | 1 cut(s) | 281 |
| MboI | GATC | 1 cut(s) | 279 |
| MboII | GAAGA | 3 cut(s) | 44, 158, 340 |
| MluCI | AATT | 6 cut(s) | 12, 35, 99, 233, 300, 322 |
| MnlI | CCTC | 1 cut(s) | 307 |
| MseI | TTAA | 3 cut(s) | 75, 210, 273 |
| MspI | CCGG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 257 |
| NdeII | GATC | 1 cut(s) | 279 |
| PfeI | GAWTC | 2 cut(s) | 202, 345 |
| PinAI | ACCGGT | 1 cut(s) | 62 |
| PspPI | GGNCC | 1 cut(s) | 65 |
| SaqAI | TTAA | 3 cut(s) | 75, 210, 273 |
| Sau3AI | GATC | 1 cut(s) | 279 |
| Sau96I | GGNCC | 1 cut(s) | 65 |
| SetI | ASST | 8 cut(s) | 51, 111, 169, 197, 270, 288, 318, 341 |
| SfaNI | GCATC | 1 cut(s) | 142 |
| SinI | GGWCC | 1 cut(s) | 65 |
| SmlI | CTYRAG | 1 cut(s) | 179 |
| SmoI | CTYRAG | 1 cut(s) | 179 |
| Sse9I | AATT | 6 cut(s) | 12, 35, 99, 233, 300, 322 |
| SspMI | CTAG | 2 cut(s) | 336, 352 |
| TaqI | TCGA | 1 cut(s) | 10 |
| TasI | AATT | 6 cut(s) | 12, 35, 99, 233, 300, 322 |
| TfiI | GAWTC | 2 cut(s) | 202, 345 |
| Tru1I | TTAA | 3 cut(s) | 75, 210, 273 |
| Tru9I | TTAA | 3 cut(s) | 75, 210, 273 |
| TspDTI | ATGAA | 2 cut(s) | 101, 161 |
| TspGWI | ACGGA | 2 cut(s) | 138, 306 |
| VpaK11BI | GGWCC | 1 cut(s) | 65 |
| XapI | RAATTY | 1 cut(s) | 233 |
| XspI | CTAG | 2 cut(s) | 336, 352 |