Splicing factor 3B subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0331871 RchiOBHm_Chr2g0148651 RchiOBHm_Chr2g0148731 RchiOBHm_Chr5g0061171 RchiOBHm_Chr6g0277941 |
| rosa_laevigata | RLG00000003434 RLG00000014192 RLG00000017787 RLG00000030135 RLG00000036316 |
| rosa_multiflora | Rmu_co8468775.1_g000001 Rmu_sc0000048.1_g000030 Rmu_sc0004598.1_g000014 Rmu_ssc0000128.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00006340 Rroxscaffold_1G00036970 |
| rosa_rugosa | Rorug06G0025900 |
| rosa_samantha | Rh1BG071400 Rh1CG190300 Rh2CG481700 Rh2DG488600 Rh4AG166800 Rh7BG358600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 296 |
| AatII | GACGTC | 1 cut(s) | 411 |
| Acc36I | ACCTGC | 1 cut(s) | 296 |
| AclWI | GGATC | 1 cut(s) | 466 |
| AcsI | RAATTY | 2 cut(s) | 188, 297 |
| AcuI | CTGAAG | 1 cut(s) | 373 |
| AcyI | GRCGYC | 1 cut(s) | 408 |
| AgsI | TTSAA | 1 cut(s) | 302 |
| AluBI | AGCT | 2 cut(s) | 150, 277 |
| AluI | AGCT | 2 cut(s) | 150, 277 |
| AlwI | GGATC | 1 cut(s) | 466 |
| ApoI | RAATTY | 2 cut(s) | 188, 297 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 173, 205 |
| AseI | ATTAAT | 1 cut(s) | 479 |
| AsuHPI | GGTGA | 3 cut(s) | 320, 403, 416 |
| BccI | CCATC | 3 cut(s) | 75, 388, 395 |
| BciVI | GTATCC | 1 cut(s) | 68 |
| BclI | TGATCA | 2 cut(s) | 234, 291 |
| BfaI | CTAG | 1 cut(s) | 398 |
| BfuAI | ACCTGC | 1 cut(s) | 296 |
| BfuI | GTATCC | 1 cut(s) | 68 |
| BmiI | GGNNCC | 1 cut(s) | 345 |
| BmsI | GCATC | 2 cut(s) | 97, 424 |
| Bpu10I | CCTNAGC | 1 cut(s) | 278 |
| BpuEI | CTTGAG | 1 cut(s) | 119 |
| BsaBI | GATNNNNATC | 1 cut(s) | 463 |
| BsaHI | GRCGYC | 1 cut(s) | 408 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 266, 296 |
| Bse8I | GATNNNNATC | 1 cut(s) | 463 |
| BseGI | GGATG | 2 cut(s) | 112, 464 |
| BseJI | GATNNNNATC | 1 cut(s) | 463 |
| BsgI | GTGCAG | 1 cut(s) | 443 |
| Bsp143I | GATC | 4 cut(s) | 234, 291, 392, 458 |
| BspHI | TCATGA | 1 cut(s) | 445 |
| BspLI | GGNNCC | 1 cut(s) | 345 |
| BspMI | ACCTGC | 1 cut(s) | 296 |
| BspPI | GGATC | 1 cut(s) | 466 |
| BssMI | GATC | 4 cut(s) | 234, 291, 392, 458 |
| BssNI | GRCGYC | 1 cut(s) | 408 |
| Bst6I | CTCTTC | 1 cut(s) | 96 |
| BstACI | GRCGYC | 1 cut(s) | 408 |
| BstC8I | GCNNGC | 1 cut(s) | 213 |
| BstDEI | CTNAG | 1 cut(s) | 278 |
| BstF5I | GGATG | 2 cut(s) | 112, 464 |
| BstKTI | GATC | 4 cut(s) | 237, 294, 395, 461 |
| BstMBI | GATC | 4 cut(s) | 234, 291, 392, 458 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 212 |
| BsuI | GTATCC | 1 cut(s) | 68 |
| BtsCI | GGATG | 2 cut(s) | 112, 464 |
| BveI | ACCTGC | 1 cut(s) | 296 |
| Cac8I | GCNNGC | 1 cut(s) | 213 |
| CciI | TCATGA | 1 cut(s) | 445 |
| CviAII | CATG | 2 cut(s) | 23, 446 |
| CviJI | RGCY | 3 cut(s) | 150, 277, 287 |
| CviKI_1 | RGCY | 3 cut(s) | 150, 277, 287 |
| DdeI | CTNAG | 1 cut(s) | 278 |
| DpnI | GATC | 4 cut(s) | 236, 293, 394, 460 |
| DpnII | GATC | 4 cut(s) | 234, 291, 392, 458 |
| Eam1104I | CTCTTC | 1 cut(s) | 96 |
| EarI | CTCTTC | 1 cut(s) | 96 |
| Eco57I | CTGAAG | 1 cut(s) | 373 |
| FaeI | CATG | 2 cut(s) | 26, 449 |
| FatI | CATG | 2 cut(s) | 22, 445 |
| FbaI | TGATCA | 2 cut(s) | 234, 291 |
| FokI | GGATG | 2 cut(s) | 119, 451 |
| FspBI | CTAG | 1 cut(s) | 398 |
| Hin1I | GRCGYC | 1 cut(s) | 408 |
| Hin1II | CATG | 2 cut(s) | 26, 449 |
| HinfI | GANTC | 2 cut(s) | 81, 157 |
| HphI | GGTGA | 3 cut(s) | 320, 403, 416 |
| Hpy188I | TCNGA | 4 cut(s) | 95, 181, 291, 392 |
| Hpy188III | TCNNGA | 2 cut(s) | 323, 446 |
| HpyAV | CCTTC | 1 cut(s) | 265 |
| HpyCH4IV | ACGT | 1 cut(s) | 408 |
| HpyCH4V | TGCA | 4 cut(s) | 26, 211, 424, 437 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 212 |
| HpyF3I | CTNAG | 1 cut(s) | 278 |
| HpySE526I | ACGT | 1 cut(s) | 408 |
| Hsp92I | GRCGYC | 1 cut(s) | 408 |
| Hsp92II | CATG | 2 cut(s) | 26, 449 |
| Ksp22I | TGATCA | 2 cut(s) | 234, 291 |
| Kzo9I | GATC | 4 cut(s) | 234, 291, 392, 458 |
| LmnI | GCTCC | 2 cut(s) | 155, 274 |
| LpnPI | CCDG | 1 cut(s) | 291 |
| LweI | GCATC | 2 cut(s) | 97, 424 |
| MaeI | CTAG | 1 cut(s) | 398 |
| MaeII | ACGT | 1 cut(s) | 408 |
| MaeIII | GTNAC | 3 cut(s) | 55, 404, 409 |
| MalI | GATC | 4 cut(s) | 236, 293, 394, 460 |
| MboI | GATC | 4 cut(s) | 234, 291, 392, 458 |
| MboII | GAAGA | 2 cut(s) | 113, 368 |
| MluCI | AATT | 5 cut(s) | 188, 255, 297, 359, 480 |
| MmeI | TCCRAC | 1 cut(s) | 436 |
| MnlI | CCTC | 4 cut(s) | 74, 97, 334, 361 |
| MseI | TTAA | 5 cut(s) | 30, 165, 219, 228, 479 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 212 |
| NdeII | GATC | 4 cut(s) | 234, 291, 392, 458 |
| NlaIII | CATG | 2 cut(s) | 26, 449 |
| NlaIV | GGNNCC | 1 cut(s) | 345 |
| NmuCI | GTSAC | 2 cut(s) | 404, 409 |
| PagI | TCATGA | 1 cut(s) | 445 |
| PaqCI | CACCTGC | 1 cut(s) | 296 |
| PfeI | GAWTC | 2 cut(s) | 81, 157 |
| PshBI | ATTAAT | 1 cut(s) | 479 |
| PspN4I | GGNNCC | 1 cut(s) | 345 |
| SaqAI | TTAA | 5 cut(s) | 30, 165, 219, 228, 479 |
| Sau3AI | GATC | 4 cut(s) | 234, 291, 392, 458 |
| SetI | ASST | 9 cut(s) | 66, 152, 225, 279, 284, 310, 345, 411, 416 |
| SfaNI | GCATC | 2 cut(s) | 97, 424 |
| SmlI | CTYRAG | 1 cut(s) | 134 |
| SmoI | CTYRAG | 1 cut(s) | 134 |
| Sse9I | AATT | 5 cut(s) | 188, 255, 297, 359, 480 |
| SspMI | CTAG | 1 cut(s) | 398 |
| TaiI | ACGT | 1 cut(s) | 411 |
| TaqI | TCGA | 1 cut(s) | 324 |
| TasI | AATT | 5 cut(s) | 188, 255, 297, 359, 480 |
| TfiI | GAWTC | 2 cut(s) | 81, 157 |
| Tru1I | TTAA | 5 cut(s) | 30, 165, 219, 228, 479 |
| Tru9I | TTAA | 5 cut(s) | 30, 165, 219, 228, 479 |
| TseFI | GTSAC | 2 cut(s) | 404, 409 |
| Tsp45I | GTSAC | 2 cut(s) | 404, 409 |
| TspDTI | ATGAA | 2 cut(s) | 11, 116 |
| TspGWI | ACGGA | 2 cut(s) | 93, 261 |
| VspI | ATTAAT | 1 cut(s) | 479 |
| XapI | RAATTY | 2 cut(s) | 188, 297 |
| XspI | CTAG | 1 cut(s) | 398 |
| ZraI | GACGTC | 1 cut(s) | 409 |