Rroxscaffold_1G00006340

Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
8428166 .. 8451610
23445 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00006340.1

Sequence Viewer

Length: 411 bp
ATGGAATGGATTAAGAGCACTAAATTAGATGATCACCAAAATAAGTGTAAGCGAGGACTTATAATTAAAAAGAATACATCAACATCTACCAACGAAGAAGTCGAGCTATGGAGCACGAGAGGAGATACAATCGAGCAAGCCGGACGACATGAGGCTCGTGAGTTGGCCGTCTCGGTTTTCACCAATGTATCGGCTATGGAGGCTTATGTCCGGCAACTAGAAACAAGCTGTTTAAAACTGGTGCAAGCGGAGCTGGAACTTGACAGACTGGAAAACAGCCATAGATCGCTGGCTAAAACCCGGAGGTCTTGTACTTCCTTCAAATGCAATGGTTTCATAGCTATGTATGCTACACTTGCCAATCGCGATGTGGACTATTGTTTGATTCCAGATTGCCCATTTCTTTCTTAA

Protein Analysis

136

Amino Acids

15.52

Weight (kDa)

6.82

Isoelectric Point (pI)

38.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 62
AccII CGCG 1 cut(s) 366
AciI CCGC 1 cut(s) 248
AcoI YGGCCR 1 cut(s) 165
AfaI GTAC 1 cut(s) 313
AgsI TTSAA 1 cut(s) 322
AluBI AGCT 4 cut(s) 106, 228, 253, 341
AluI AGCT 4 cut(s) 106, 228, 253, 341
Alw21I GWGCWC 2 cut(s) 20, 116
Alw26I GTCTC 1 cut(s) 175
AoxI GGCC 1 cut(s) 165
AsuC2I CCSGG 1 cut(s) 301
AsuHPI GGTGA 2 cut(s) 26, 172
BaeI ACNNNNGTAYC 2 cut(s) 171, 204
BauI CACGAG 2 cut(s) 115, 156
Bbv12I GWGCWC 2 cut(s) 20, 116
BceAI ACGGC 1 cut(s) 152
BclI TGATCA 1 cut(s) 31
BcnI CCSGG 1 cut(s) 301
BcoDI GTCTC 1 cut(s) 175
BfaI CTAG 1 cut(s) 218
Bme1390I CCNGG 1 cut(s) 301
BmrFI CCNGG 1 cut(s) 301
BpuMI CCSGG 1 cut(s) 301
BsaXI ACNNNNNCTCC 2 cut(s) 295, 325
Bse1I ACTGG 2 cut(s) 243, 273
Bse3DI GCAATG 1 cut(s) 334
BseMI GCAATG 1 cut(s) 334
BseNI ACTGG 2 cut(s) 243, 273
BseRI GAGGAG 1 cut(s) 135
Bsh1236I CGCG 1 cut(s) 366
BshFI GGCC 1 cut(s) 167
BsiHKAI GWGCWC 2 cut(s) 20, 116
BsiSI CCGG 3 cut(s) 141, 211, 301
BsmAI GTCTC 1 cut(s) 175
BsmBI CGTCTC 1 cut(s) 175
BsnI GGCC 1 cut(s) 167
Bsp1286I GDGCHC 2 cut(s) 20, 116
Bsp143I GATC 2 cut(s) 31, 284
Bsp68I TCGCGA 1 cut(s) 366
BspACI CCGC 1 cut(s) 248
BspANI GGCC 1 cut(s) 167
BspFNI CGCG 1 cut(s) 366
BsrDI GCAATG 1 cut(s) 334
BsrI ACTGG 2 cut(s) 243, 273
BssMI GATC 2 cut(s) 31, 284
BssSI CACGAG 2 cut(s) 115, 156
Bst2BI CACGAG 2 cut(s) 115, 156
BstC8I GCNNGC 3 cut(s) 138, 246, 291
BstFNI CGCG 1 cut(s) 366
BstKTI GATC 2 cut(s) 34, 287
BstMAI GTCTC 1 cut(s) 175
BstMBI GATC 2 cut(s) 31, 284
BstMWI GCNNNNNNNGC 4 cut(s) 200, 250, 347, 356
BstSCI CCNGG 1 cut(s) 299
BstUI CGCG 1 cut(s) 366
BsuRI GGCC 1 cut(s) 167
BtgZI GCGATG 1 cut(s) 381
BtuMI TCGCGA 1 cut(s) 366
Cac8I GCNNGC 3 cut(s) 138, 246, 291
Csp6I GTAC 1 cut(s) 312
CviAII CATG 1 cut(s) 149
CviQI GTAC 1 cut(s) 312
DpnI GATC 2 cut(s) 33, 286
DpnII GATC 2 cut(s) 31, 284
DraI TTTAAA 1 cut(s) 234
EaeI YGGCCR 1 cut(s) 165
Esp3I CGTCTC 1 cut(s) 175
FaeI CATG 1 cut(s) 152
FaiI YATR 9 cut(s) 62, 109, 150, 197, 207, 282, 338, 344, 348
FatI CATG 1 cut(s) 148
FbaI TGATCA 1 cut(s) 31
FspBI CTAG 1 cut(s) 218
HaeIII GGCC 1 cut(s) 167
HapII CCGG 3 cut(s) 141, 211, 301
Hin1II CATG 1 cut(s) 152
HinfI GANTC 1 cut(s) 385
HpaII CCGG 3 cut(s) 141, 211, 301
HphI GGTGA 2 cut(s) 26, 172
Hpy166II GTNNAC 1 cut(s) 373
Hpy188III TCNNGA 3 cut(s) 158, 365, 389
Hpy8I GTNNAC 1 cut(s) 373
HpyAV CCTTC 1 cut(s) 328
HpyCH4V TGCA 2 cut(s) 244, 327
HpyF10VI GCNNNNNNNGC 4 cut(s) 200, 250, 347, 356
Hsp92II CATG 1 cut(s) 152
Ksp22I TGATCA 1 cut(s) 31
Kzo9I GATC 2 cut(s) 31, 284
LmnI GCTCC 2 cut(s) 111, 250
LpnPI CCDG 8 cut(s) 154, 224, 224, 239, 254, 275, 314, 402
MaeI CTAG 1 cut(s) 218
MalI GATC 2 cut(s) 33, 286
MboI GATC 2 cut(s) 31, 284
MboII GAAGA 1 cut(s) 107
MhlI GDGCHC 2 cut(s) 20, 116
MluCI AATT 2 cut(s) 23, 63
MnlI CCTC 5 cut(s) 47, 113, 145, 193, 297
MseI TTAA 4 cut(s) 12, 66, 233, 409
MslI CAYNNNNRTG 1 cut(s) 341
MspI CCGG 3 cut(s) 141, 211, 301
MspR9I CCNGG 1 cut(s) 301
MvnI CGCG 1 cut(s) 366
MwoI GCNNNNNNNGC 4 cut(s) 200, 250, 347, 356
NciI CCSGG 1 cut(s) 301
NdeII GATC 2 cut(s) 31, 284
NlaIII CATG 1 cut(s) 152
NruI TCGCGA 1 cut(s) 366
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PfeI GAWTC 1 cut(s) 385
PsiI TTATAA 1 cut(s) 62
RruI TCGCGA 1 cut(s) 366
RsaI GTAC 1 cut(s) 313
RsaNI GTAC 1 cut(s) 312
RseI CAYNNNNRTG 1 cut(s) 341
SaqAI TTAA 4 cut(s) 12, 66, 233, 409
Sau3AI GATC 2 cut(s) 31, 284
ScrFI CCNGG 1 cut(s) 301
SduI GDGCHC 2 cut(s) 20, 116
SetI ASST 5 cut(s) 108, 230, 255, 308, 343
SmiMI CAYNNNNRTG 1 cut(s) 341
Sse9I AATT 2 cut(s) 23, 63
SsiI CCGC 1 cut(s) 248
SspMI CTAG 1 cut(s) 218
StyD4I CCNGG 1 cut(s) 299
TaqI TCGA 2 cut(s) 102, 132
TasI AATT 2 cut(s) 23, 63
TatI WGTACW 1 cut(s) 311
TfiI GAWTC 1 cut(s) 385
Tru1I TTAA 4 cut(s) 12, 66, 233, 409
Tru9I TTAA 4 cut(s) 12, 66, 233, 409
TspDTI ATGAA 1 cut(s) 325
XcmI CCANNNNNNNNNTGG 1 cut(s) 367
XspI CTAG 1 cut(s) 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.