Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005164

Physical Location & Seq

Genomic Coordinates Forward (+)

61982872 .. 61987392

Gene Structure 4521 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGGAGGCCATCCAACCAAACCCTATCGAAACCCTAGATCACCAACCTCCCTCCGAACCCCCCGCCTCCTACAACCACCACCCTCCTTCGGAATCTCTAGTCTCCGATTACAAGGACCCGTCTCCTCCCCCATCTCAAACCCTAGCCTCCCAGGCCGCCGCCGCCGCCGCCGCCGCCGCTGTCGAGAACGGAAATTCCGCCGACGCCGGCAAGGCGGTAGCTCTGCTGATATCGGAAAACGGACTGACCAACACCCAGAGCGGGACGACCGACCGGGAAGTCTCCGGCGGAGAGGAGGAGACCACGAGCAGGCGGATCCGTCGCAGCCGGTGGGACCCGCAGCCTGAGTCGGAGAACCAGGGGGATGAATCCGGTAGCGGGAAGAGGAAGAGGAAGTCGCGGTGGGCCGCCGAGGAGCCCAAGCCGGTGGTTCAGCTGCCGGATTTCATGGGAGGTATAGAATTCGATCCTGAAATTCAAGCTTTGAATAGTAGGCTTCTTGAGATTAGTCGGATGCTCTCTTCGGGGTTGCCTTTGGATGACAGACCCGAAGGAGCTAGGTCTCCGTCGCCGGAGCCGGTGTATGATAACATGGGGATTAGGATTAATACTAGAGAGTTTCGAGCGCGTGAGAGGTTGAATAGAGAGAGGCAGGAGATTATTGCTCAGATTCTTAAGAGGAACCCTAACTATAAGCCTCCGGCGGATTACAGGCCGCCTAAGCTTCACAAGAAGCTTTACATTCCCATGAAGGAGTACCCTGGTTACAATTTTATTGGGCTTATTATCGGCCCAAGGGGTAATACTCAGAAGAGGATGGAGAAAGAAACTGGTGCGAAGATTGTGATTAGGGGGAAAGGGTCTGTGAAGGAGGGTAGGTTGCAACAGAAGAGGGATTTGAAGCCTGATCCCTCGGAGAATGAGGACTTGCATGTTCTGGTTGAGGCTGATACGCAGGATGCTCTTGATGCTGCAGCTGGGATGGTGGAGAAGCTCTTGCAGCCTGTGGATGAGGTGTTGAATGAGCATAAGAGGCAACAGCTTAGGGAACTCGCGGCGTTGAATGGGACTATTAGGGATGAGGAGTATTGTAGGTTATGTGGTGAGCCTGGGCATCGTCAGTATGCATGTCCTTCACGAACCTCAACCTTTAAGAGTGATGTGCTCTGTAAGATATGTGGTGATGGTGGGCACCCTACTATCGATTGTCCAATGAAGGGTACATCTGGGAAGAAAATGGATGATGAGTATCAGAATTTTTTGGCTGAGTTAGGTGGGACAGTTCCCGAGTCAGCAACTAAGCAGACTGCTACTCTGGCTCTTGGCCCAGGGACTTCAGTAAGCAATCCTCCGTGGTCTAACAGTGGTGGGAGTGCTAGCAGTGCATCACATCCAGGGTTGGGTTTTTCTGGAATTAAGCCTACTACAAAGGAACATGACGACACAAATTTGTACATTGGATACTTGCCACCTACACTTGAGGATGATGGTTTGATCGGTATGTTTTCACAGTTCGGTGACATTGTGATGGCCAAAGTTATCAAGGACCGGGTTACTGGATTGAGTAAAGGTTATGGATTTGTGAAGTACGCAGATGTTCAGATGGCTAATAATGCTATTGCAAGCATGAATGGCTATCGGCTTGAGGGGCGATCAATTGCTGTCAGAGTTGCTGGCAAGCCTCCCCAGCCTGTTGTGCCTCCCGGACTACCAGCTTCAGCAATGCCGTCATACCCTGTTTCCAGTCAGCCTGTTGGTGCCTATCCCTCTCAGCAGTTTTCCCCAGGTGGTCCTCTTGGGAATGCACCACCTACTAGCTATGCGGGTACTCCGGTTCCATGGGGACCTCCCATTCCTCCTCCTTATGCTCCTTATGTCCCTCCCCCTCCTCCTGCTTCAGCAATGTTTTATCCTCCCATGAGTCAACCTATGGCTGGTTATGGTCCACGGTACCCTCCTCCCCCTGGTGCACCACCTCAGCTGCCCTCCAGTGAAGCACAGCAGAGTTACCCTCCTCCAGGAGTTCAATCTGAAAACCCTACCCAATCTTTACCAACTAGTATGTATGGGAGCTCTTTACCGGCAATGCCACCAAATGGCCAACACACTTATCCTCCATCTTCATATGGTTACTCATCTTACTACAATGCTGTTCCACCTCCCCCTCCCTCAACTACAGACCAATCTCAGAACATTGGTAATGTGCCATGGGCCACAAGTACTCCAGCTCCCCCTCCTGCTTCTTCTGCAGAGAAAGCAACATATGGTGCAGATGCAGAGTATGAGAAGTTCATGGCAGAGACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010467 GO:0016070 GO:0033993 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0071704 GO:0090304 GO:0097305 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1 RRM_1 SF1-HH

Protein Analysis

769

Amino Acids

82.79

Weight (kDa)

5.75

Isoelectric Point (pI)

58.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SF1-HH	PF16275	131 - 238	6e-25	Splicing factor 1 helix-hairpin domain
KH-I_KHDC4-BBP	PF22675	252 - 334	7.6e-24	KHDC4/BBP-like, KH-domain type I
RRM_1	PF00076	484 - 553	1.1e-17	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005164)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51300 AT5G51300 AT5G51300
fragaria_vesca	FvH4_6g31120 FvH4_6g31120 FvH4_7g27230 FvH4_7g27230
malus_domestica	MD01G1181200.v1.1 MD07G1251300.v1.1
prunus_persica	Prupe.2G275100_v2.0.a1
pyrus_communis	pycom01g19120 pycom07g22400
rosa_chinensis	RchiOBHm_Chr1g0374011 RchiOBHm_Chr2g0137831
rosa_laevigata	RLG00000019679 RLG00000026786
rosa_roxburghii	Rroxscaffold_2G00106780 Rroxscaffold_4G00283830
rosa_rugosa	Rorug01G0380300 Rorug02G0346500
rosa_samantha	Rh1AG390700 Rh1BG354800 Rh1CG367900 Rh1DG385500 Rh2AG393200 Rh2BG400800 Rh2CG379900 Rh2DG415800
rosa_wichuraiana	Rw1G034450 Rw2G032210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	278
Acc65I	GGTACC	1 cut(s)	1950
AccB1I	GGYRCC	3 cut(s)	1191, 1757, 1950
AccB7I	CCANNNNNTGG	1 cut(s)	2096
AccBSI	CCGCTC	1 cut(s)	261
AccII	CGCG	3 cut(s)	400, 628, 1055
AclWI	GGATC	4 cut(s)	310, 323, 461, 902
AcoI	YGGCCR	2 cut(s)	1530, 2098
AcsI	RAATTY	5 cut(s)	193, 461, 474, 1255, 1447
AcuI	CTGAAG	3 cut(s)	1320, 1701, 1881
AcyI	GRCGYC	1 cut(s)	204
AfaI	GTAC	7 cut(s)	758, 1222, 1454, 1589, 1828, 1952, 2221
AflII	CTTAAG	1 cut(s)	674
AgsI	TTSAA	7 cut(s)	479, 487, 640, 901, 1021, 1063, 2027
AhlI	ACTAGT	1 cut(s)	2057
AjnI	CCWGG	9 cut(s)	150, 357, 760, 1108, 1327, 1393, 1783, 1963, 2017
AloI	GAACNNNNNNTCC	2 cut(s)	179, 211
Alw21I	GWGCWC	3 cut(s)	1167, 1972, 2075
Alw26I	GTCTC	6 cut(s)	106, 126, 286, 293, 567, 2294
Alw44I	GTGCAC	1 cut(s)	1968
AlwI	GGATC	4 cut(s)	310, 323, 461, 902
Ama87I	CYCGRG	1 cut(s)	1286
AoxI	GGCC	9 cut(s)	6, 153, 405, 713, 790, 1324, 1530, 2098, 2211
ApaLI	GTGCAC	1 cut(s)	1968
ApeKI	GCWGC	7 cut(s)	324, 340, 436, 971, 974, 1000, 1981
ApoI	RAATTY	5 cut(s)	193, 461, 474, 1255, 1447
AseI	ATTAAT	1 cut(s)	606
Asp718I	GGTACC	1 cut(s)	1950
AspLEI	GCGC	1 cut(s)	628
AsuC2I	CCSGG	3 cut(s)	275, 1550, 1704
AsuHPI	GGTGA	4 cut(s)	32, 1115, 1193, 1529
AsuNHI	GCTAGC	1 cut(s)	1376
AvaI	CYCGRG	1 cut(s)	1286
AvaII	GGWCC	6 cut(s)	115, 334, 1546, 1790, 1844, 1943
BaeGI	GKGCMC	2 cut(s)	1194, 1972
BaeI	ACNNNNGTAYC	2 cut(s)	1818, 1851
BalI	TGGCCA	2 cut(s)	1532, 2100
BamHI	GGATCC	1 cut(s)	315
BanI	GGYRCC	3 cut(s)	1191, 1757, 1950
BanII	GRGCYC	2 cut(s)	420, 2075
BauI	CACGAG	1 cut(s)	304
Bbv12I	GWGCWC	3 cut(s)	1167, 1972, 2075
BbvCI	CCTCAGC	1 cut(s)	1977
BbvI	GCAGC	7 cut(s)	336, 352, 423, 958, 986, 1012, 1968
BccI	CCATC	9 cut(s)	17, 139, 811, 976, 1178, 1481, 1522, 1597, 2125
BceAI	ACGGC	1 cut(s)	1711
BciT130I	CCWGG	9 cut(s)	152, 359, 762, 1110, 1329, 1395, 1785, 1965, 2019
BciVI	GTATCC	1 cut(s)	1454
BcnI	CCSGG	3 cut(s)	275, 1550, 1704
BcoDI	GTCTC	6 cut(s)	106, 126, 286, 293, 567, 2294
BcuI	ACTAGT	1 cut(s)	2057
BfaI	CTAG	8 cut(s)	35, 98, 143, 558, 612, 1377, 1815, 2058
BfmI	CTRYAG	3 cut(s)	972, 2175, 2247
BfrI	CTTAAG	1 cut(s)	674
BfuI	GTATCC	1 cut(s)	1454
BglI	GCCNNNNNGGC	2 cut(s)	152, 212
BmcAI	AGTACT	1 cut(s)	2221
Bme18I	GGWCC	6 cut(s)	115, 334, 1546, 1790, 1844, 1943
BmeT110I	CYCGRG	1 cut(s)	1286
BmsI	GCATC	6 cut(s)	504, 949, 958, 1123, 1394, 2263
BmtI	GCTAGC	1 cut(s)	1380
BplI	GAGNNNNNCTC	2 cut(s)	1996, 2028
BpmI	CTGGAG	3 cut(s)	1972, 2001, 2208
Bpu10I	CCTNAGC	3 cut(s)	720, 1043, 1977
BpuEI	CTTGAG	3 cut(s)	521, 1499, 1664
BpuMI	CCSGG	3 cut(s)	275, 1550, 1704
Bsa29I	ATCGAT	1 cut(s)	1203
BsaBI	GATNNNNATC	1 cut(s)	1248
BsaHI	GRCGYC	1 cut(s)	204
BsaI	GGTCTC	2 cut(s)	293, 567
BsaWI	WCCGGW	2 cut(s)	371, 1831
Bse118I	RCCGGY	5 cut(s)	206, 327, 424, 577, 2080
Bse1I	ACTGG	4 cut(s)	835, 1561, 1743, 1989
Bse3DI	GCAATG	3 cut(s)	1728, 1908, 2091
Bse8I	GATNNNNATC	1 cut(s)	1248
BseBI	CCWGG	9 cut(s)	152, 359, 762, 1110, 1329, 1395, 1785, 1965, 2019
BseCI	ATCGAT	1 cut(s)	1203
BseJI	GATNNNNATC	1 cut(s)	1248
BseMI	GCAATG	3 cut(s)	1728, 1908, 2091
BseMII	CTCAG	7 cut(s)	336, 680, 821, 1257, 1784, 1991, 2201
BseNI	ACTGG	4 cut(s)	835, 1561, 1743, 1989
BseRI	GAGGAG	9 cut(s)	114, 308, 311, 428, 1097, 1848, 1878, 1947, 2004
BseSI	GKGCMC	2 cut(s)	1194, 1972
BseXI	GCAGC	7 cut(s)	336, 352, 423, 958, 986, 1012, 1968
BseYI	CCCAGC	2 cut(s)	977, 1686
BsgI	GTGCAG	1 cut(s)	2289
Bsh1236I	CGCG	3 cut(s)	400, 628, 1055
Bsh1285I	CGRYCG	2 cut(s)	270, 274
BshFI	GGCC	9 cut(s)	8, 155, 407, 715, 792, 1326, 1532, 2100, 2213
BshNI	GGYRCC	3 cut(s)	1191, 1757, 1950
BshVI	ATCGAT	1 cut(s)	1203
BsiEI	CGRYCG	2 cut(s)	270, 274
BsiHKAI	GWGCWC	3 cut(s)	1167, 1972, 2075
BsiHKCI	CYCGRG	1 cut(s)	1286
BslFI	GGGAC	7 cut(s)	277, 347, 1081, 1291, 1345, 1857, 1862
BsmAI	GTCTC	6 cut(s)	106, 126, 286, 293, 567, 2294
BsmBI	CGTCTC	1 cut(s)	126
BsmFI	GGGAC	7 cut(s)	277, 347, 1081, 1291, 1345, 1857, 1862
BsmI	GAATGC	1 cut(s)	1807
BsnI	GGCC	9 cut(s)	8, 155, 407, 715, 792, 1326, 1532, 2100, 2213
Bso31I	GGTCTC	2 cut(s)	293, 567
BsoBI	CYCGRG	1 cut(s)	1286
Bsp1286I	GDGCHC	5 cut(s)	420, 1167, 1194, 1972, 2075
Bsp1407I	TGTACA	1 cut(s)	1452
Bsp143I	GATC	6 cut(s)	37, 315, 466, 907, 1494, 1652
Bsp19I	CCATGG	2 cut(s)	1838, 2207
BspANI	GGCC	9 cut(s)	8, 155, 407, 715, 792, 1326, 1532, 2100, 2213
BspCNI	CTCAG	7 cut(s)	337, 679, 820, 1258, 1783, 1990, 2200
BspDI	ATCGAT	1 cut(s)	1203
BspFNI	CGCG	3 cut(s)	400, 628, 1055
BspMAI	CTGCAG	2 cut(s)	976, 2251
BspOI	GCTAGC	1 cut(s)	1380
BspPI	GGATC	4 cut(s)	310, 323, 461, 902
BspT107I	GGYRCC	3 cut(s)	1191, 1757, 1950
BspTI	CTTAAG	1 cut(s)	674
BspTNI	GGTCTC	2 cut(s)	293, 567
BsrBI	CCGCTC	1 cut(s)	261
BsrDI	GCAATG	3 cut(s)	1728, 1908, 2091
BsrFI	RCCGGY	5 cut(s)	206, 327, 424, 577, 2080
BsrGI	TGTACA	1 cut(s)	1452
BsrI	ACTGG	4 cut(s)	835, 1561, 1743, 1989
BssAI	RCCGGY	5 cut(s)	206, 327, 424, 577, 2080
BssMI	GATC	6 cut(s)	37, 315, 466, 907, 1494, 1652
BssNI	GRCGYC	1 cut(s)	204
BssSI	CACGAG	1 cut(s)	304
BssT1I	CCWWGG	3 cut(s)	794, 1838, 2207
Bst2BI	CACGAG	1 cut(s)	304
Bst2UI	CCWGG	9 cut(s)	152, 359, 762, 1110, 1329, 1395, 1785, 1965, 2019
Bst4CI	ACNGT	4 cut(s)	1282, 1364, 1512, 1950
Bst6I	CTCTTC	5 cut(s)	377, 383, 526, 806, 884
BstACI	GRCGYC	1 cut(s)	204
BstAFI	CTTAAG	1 cut(s)	674
BstAUI	TGTACA	1 cut(s)	1452
BstC8I	GCNNGC	6 cut(s)	208, 311, 1378, 1624, 1675, 1679
BstDSI	CCRYGG	4 cut(s)	1352, 1838, 1946, 2207
BstENI	CCTNNNNNAGG	1 cut(s)	2016
BstFNI	CGCG	3 cut(s)	400, 628, 1055
BstHHI	GCGC	1 cut(s)	628
BstKTI	GATC	6 cut(s)	40, 318, 469, 910, 1497, 1655
BstMAI	GTCTC	6 cut(s)	106, 126, 286, 293, 567, 2294
BstMBI	GATC	6 cut(s)	37, 315, 466, 907, 1494, 1652
BstMCI	CGRYCG	2 cut(s)	270, 274
BstNI	CCWGG	9 cut(s)	152, 359, 762, 1110, 1329, 1395, 1785, 1965, 2019
BstNSI	RCATGY	2 cut(s)	935, 1131
BstSFI	CTRYAG	3 cut(s)	972, 2175, 2247
BstSLI	GKGCMC	2 cut(s)	1194, 1972
BstUI	CGCG	3 cut(s)	400, 628, 1055
BstV1I	GCAGC	7 cut(s)	336, 352, 423, 958, 986, 1012, 1968
BstX2I	RGATCY	1 cut(s)	315
BstXI	CCANNNNNNTGG	1 cut(s)	427
BstYI	RGATCY	1 cut(s)	315
Bsu15I	ATCGAT	1 cut(s)	1203
BsuI	GTATCC	1 cut(s)	1454
BsuRI	GGCC	9 cut(s)	8, 155, 407, 715, 792, 1326, 1532, 2100, 2213
BsuTUI	ATCGAT	1 cut(s)	1203
BtgI	CCRYGG	4 cut(s)	1352, 1838, 1946, 2207
BtsI	GCAGTG	1 cut(s)	1387
BtsIMutI	CAGTG	3 cut(s)	1369, 1387, 1996
Cac8I	GCNNGC	6 cut(s)	208, 311, 1378, 1624, 1675, 1679
CfoI	GCGC	1 cut(s)	628
Cfr10I	RCCGGY	5 cut(s)	206, 327, 424, 577, 2080
ClaI	ATCGAT	1 cut(s)	1203
CseI	GACGC	1 cut(s)	212
Csp6I	GTAC	7 cut(s)	757, 1221, 1453, 1588, 1827, 1951, 2220
CviQI	GTAC	7 cut(s)	757, 1221, 1453, 1588, 1827, 1951, 2220
DpnI	GATC	6 cut(s)	39, 317, 468, 909, 1496, 1654
DpnII	GATC	6 cut(s)	37, 315, 466, 907, 1494, 1652
DrdI	GACNNNNNNGTC	1 cut(s)	278
DseDI	GACNNNNNNGTC	1 cut(s)	278
EaeI	YGGCCR	2 cut(s)	1530, 2098
Eam1104I	CTCTTC	5 cut(s)	377, 383, 526, 806, 884
EarI	CTCTTC	5 cut(s)	377, 383, 526, 806, 884
EciI	GGCGGA	4 cut(s)	187, 303, 328, 719
Ecl136II	GAGCTC	1 cut(s)	2073
Eco130I	CCWWGG	3 cut(s)	794, 1838, 2207
Eco24I	GRGCYC	2 cut(s)	420, 2075
Eco31I	GGTCTC	2 cut(s)	293, 567
Eco32I	GATATC	1 cut(s)	231
Eco47I	GGWCC	6 cut(s)	115, 334, 1546, 1790, 1844, 1943
Eco53kI	GAGCTC	1 cut(s)	2073
Eco57I	CTGAAG	3 cut(s)	1320, 1701, 1881
Eco88I	CYCGRG	1 cut(s)	1286
EcoICRI	GAGCTC	1 cut(s)	2073
EcoNI	CCTNNNNNAGG	1 cut(s)	2016
EcoO109I	RGGNCCY	3 cut(s)	115, 334, 1844
EcoRI	GAATTC	1 cut(s)	461
EcoRII	CCWGG	9 cut(s)	150, 357, 760, 1108, 1327, 1393, 1783, 1963, 2017
EcoRV	GATATC	1 cut(s)	231
EcoT14I	CCWWGG	3 cut(s)	794, 1838, 2207
EcoT22I	ATGCAT	1 cut(s)	1129
EcoT38I	GRGCYC	2 cut(s)	420, 2075
ErhI	CCWWGG	3 cut(s)	794, 1838, 2207
Esp3I	CGTCTC	1 cut(s)	126
FaqI	GGGAC	7 cut(s)	277, 347, 1081, 1291, 1345, 1857, 1862
FauI	CCCGC	5 cut(s)	70, 254, 345, 371, 1816
FauNDI	CATATG	2 cut(s)	2125, 2263
FriOI	GRGCYC	2 cut(s)	420, 2075
FspBI	CTAG	8 cut(s)	35, 98, 143, 558, 612, 1377, 1815, 2058
GlaI	GCGC	1 cut(s)	627
GsaI	CCCAGC	2 cut(s)	981, 1690
GsuI	CTGGAG	3 cut(s)	1972, 2001, 2208
HaeIII	GGCC	9 cut(s)	8, 155, 407, 715, 792, 1326, 1532, 2100, 2213
HgaI	GACGC	1 cut(s)	212
HhaI	GCGC	1 cut(s)	628
Hin1I	GRCGYC	1 cut(s)	204
Hin6I	GCGC	1 cut(s)	626
HinP1I	GCGC	1 cut(s)	626
HincII	GTYRAC	1 cut(s)	1925
HindII	GTYRAC	1 cut(s)	1925
HindIII	AAGCTT	3 cut(s)	480, 722, 734
HinfI	GANTC	6 cut(s)	92, 347, 368, 670, 1289, 1921
HphI	GGTGA	4 cut(s)	32, 1115, 1193, 1529
Hpy166II	GTNNAC	3 cut(s)	1925, 1946, 1970
Hpy188III	TCNNGA	7 cut(s)	184, 470, 500, 965, 1137, 1286, 1410
Hpy8I	GTNNAC	3 cut(s)	1925, 1946, 1970
Hpy99I	CGWCG	3 cut(s)	206, 324, 571
HpyAV	CCTTC	6 cut(s)	96, 545, 745, 862, 1143, 1210
HpyCH4III	ACNGT	4 cut(s)	1282, 1364, 1512, 1950
Hsp92I	GRCGYC	1 cut(s)	204
HspAI	GCGC	1 cut(s)	626
KflI	GGGWCCC	1 cut(s)	334
KpnI	GGTACC	1 cut(s)	1954
KroI	GCCGGC	1 cut(s)	206
KroNI	GCCGGC	1 cut(s)	208
Kzo9I	GATC	6 cut(s)	37, 315, 466, 907, 1494, 1652
LmnI	GCTCC	6 cut(s)	415, 554, 574, 1873, 2070, 2233
Lsp1109I	GCAGC	7 cut(s)	336, 352, 423, 958, 986, 1012, 1968
LweI	GCATC	6 cut(s)	504, 949, 958, 1123, 1394, 2263
MaeI	CTAG	8 cut(s)	35, 98, 143, 558, 612, 1377, 1815, 2058
MaeIII	GTNAC	5 cut(s)	764, 1517, 1552, 2006, 2129
MalI	GATC	6 cut(s)	39, 317, 468, 909, 1496, 1654
MbiI	CCGCTC	1 cut(s)	261
MboI	GATC	6 cut(s)	37, 315, 466, 907, 1494, 1652
MboII	GAAGA	9 cut(s)	394, 400, 513, 823, 850, 901, 1243, 2112, 2235
MfeI	CAATTG	1 cut(s)	1656
MflI	RGATCY	1 cut(s)	315
MhlI	GDGCHC	5 cut(s)	420, 1167, 1194, 1972, 2075
MlsI	TGGCCA	2 cut(s)	1532, 2100
MluCI	AATT	8 cut(s)	193, 461, 474, 769, 1255, 1413, 1447, 1656
MluNI	TGGCCA	2 cut(s)	1532, 2100
MlyI	GAGTC	3 cut(s)	356, 1298, 1930
MmeI	TCCRAC	3 cut(s)	37, 330, 491
Mox20I	TGGCCA	2 cut(s)	1532, 2100
Mph1103I	ATGCAT	1 cut(s)	1129
MroNI	GCCGGC	1 cut(s)	206
MscI	TGGCCA	2 cut(s)	1532, 2100
MseI	TTAA	4 cut(s)	606, 675, 1152, 1416
MslI	CAYNNNNRTG	2 cut(s)	746, 1526
Msp20I	TGGCCA	2 cut(s)	1532, 2100
MspA1I	CMGCKG	4 cut(s)	179, 436, 977, 1981
MspCI	CTTAAG	1 cut(s)	674
MunI	CAATTG	1 cut(s)	1656
Mva1269I	GAATGC	1 cut(s)	1807
MvaI	CCWGG	9 cut(s)	152, 359, 762, 1110, 1329, 1395, 1785, 1965, 2019
MvnI	CGCG	3 cut(s)	400, 628, 1055
NaeI	GCCGGC	1 cut(s)	208
NciI	CCSGG	3 cut(s)	275, 1550, 1704
NcoI	CCATGG	2 cut(s)	1838, 2207
NdeI	CATATG	2 cut(s)	2125, 2263
NdeII	GATC	6 cut(s)	37, 315, 466, 907, 1494, 1652
NgoMIV	GCCGGC	1 cut(s)	206
NheI	GCTAGC	1 cut(s)	1376
NmeAIII	GCCGAG	1 cut(s)	436
NmuCI	GTSAC	1 cut(s)	1517
NsiI	ATGCAT	1 cut(s)	1129
NspI	RCATGY	2 cut(s)	935, 1131
PasI	CCCWGGG	1 cut(s)	1328
PctI	GAATGC	1 cut(s)	1807
PdiI	GCCGGC	1 cut(s)	208
PfeI	GAWTC	3 cut(s)	92, 368, 670
PflMI	CCANNNNNTGG	1 cut(s)	2096
PfoI	TCCNGGA	2 cut(s)	1702, 2017
PleI	GAGTC	3 cut(s)	355, 1297, 1929
PpsI	GAGTC	3 cut(s)	355, 1297, 1929
PpuMI	RGGWCCY	3 cut(s)	115, 334, 1844
PshBI	ATTAAT	1 cut(s)	606
Psp124BI	GAGCTC	1 cut(s)	2075
Psp5II	RGGWCCY	3 cut(s)	115, 334, 1844
Psp6I	CCWGG	9 cut(s)	150, 357, 760, 1108, 1327, 1393, 1783, 1963, 2017
PspFI	CCCAGC	2 cut(s)	977, 1686
PspGI	CCWGG	9 cut(s)	150, 357, 760, 1108, 1327, 1393, 1783, 1963, 2017
PspPPI	RGGWCCY	3 cut(s)	115, 334, 1844
PsrI	GAACNNNNNNTAC	2 cut(s)	2273, 2305
PstI	CTGCAG	2 cut(s)	976, 2251
PsuI	RGATCY	1 cut(s)	315
PvuII	CAGCTG	3 cut(s)	436, 977, 1981
RsaI	GTAC	7 cut(s)	758, 1222, 1454, 1589, 1828, 1952, 2221
RsaNI	GTAC	7 cut(s)	757, 1221, 1453, 1588, 1827, 1951, 2220
RseI	CAYNNNNRTG	2 cut(s)	746, 1526
SacI	GAGCTC	1 cut(s)	2075
SaqAI	TTAA	4 cut(s)	606, 675, 1152, 1416
Sau3AI	GATC	6 cut(s)	37, 315, 466, 907, 1494, 1652
ScaI	AGTACT	1 cut(s)	2221
SchI	GAGTC	3 cut(s)	356, 1298, 1930
SduI	GDGCHC	5 cut(s)	420, 1167, 1194, 1972, 2075
SfaNI	GCATC	6 cut(s)	504, 949, 958, 1123, 1394, 2263
SfcI	CTRYAG	3 cut(s)	972, 2175, 2247
SinI	GGWCC	6 cut(s)	115, 334, 1546, 1790, 1844, 1943
SmiMI	CAYNNNNRTG	2 cut(s)	746, 1526
SmlI	CTYRAG	4 cut(s)	500, 674, 1478, 1643
SmoI	CTYRAG	4 cut(s)	500, 674, 1478, 1643
SpeI	ACTAGT	1 cut(s)	2057
Sse9I	AATT	8 cut(s)	193, 461, 474, 769, 1255, 1413, 1447, 1656
SspMI	CTAG	8 cut(s)	35, 98, 143, 558, 612, 1377, 1815, 2058
SstI	GAGCTC	1 cut(s)	2075
StyI	CCWWGG	3 cut(s)	794, 1838, 2207
TaaI	ACNGT	4 cut(s)	1282, 1364, 1512, 1950
TaqI	TCGA	5 cut(s)	27, 183, 465, 622, 1203
TaqII	GACCGA	1 cut(s)	284
TasI	AATT	8 cut(s)	193, 461, 474, 769, 1255, 1413, 1447, 1656
TatI	WGTACW	2 cut(s)	1452, 2219
TfiI	GAWTC	3 cut(s)	92, 368, 670
Tru1I	TTAA	4 cut(s)	606, 675, 1152, 1416
Tru9I	TTAA	4 cut(s)	606, 675, 1152, 1416
TscAI	CASTG	3 cut(s)	1369, 1387, 1996
TseFI	GTSAC	1 cut(s)	1517
TseI	GCWGC	7 cut(s)	324, 340, 436, 971, 974, 1000, 1981
Tsp45I	GTSAC	1 cut(s)	1517
TspDTI	ATGAA	7 cut(s)	381, 436, 764, 1229, 1643, 2112, 2281
TspGWI	ACGGA	5 cut(s)	204, 255, 308, 555, 1341
TspRI	CASTG	3 cut(s)	1369, 1387, 1996
Van91I	CCANNNNNTGG	1 cut(s)	2096
Vha464I	CTTAAG	1 cut(s)	674
VneI	GTGCAC	1 cut(s)	1968
VpaK11BI	GGWCC	6 cut(s)	115, 334, 1546, 1790, 1844, 1943
VspI	ATTAAT	1 cut(s)	606
XagI	CCTNNNNNAGG	1 cut(s)	2016
XapI	RAATTY	5 cut(s)	193, 461, 474, 1255, 1447
XceI	RCATGY	2 cut(s)	935, 1131
XspI	CTAG	8 cut(s)	35, 98, 143, 558, 612, 1377, 1815, 2058
ZrmI	AGTACT	1 cut(s)	2221
Zsp2I	ATGCAT	1 cut(s)	1129

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.