Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005541

Physical Location & Seq

Genomic Coordinates Forward (+)

27277654 .. 27279791

Gene Structure 2138 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ56377

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGATTGTAACTTCTAAGGGCGTTTTTAACAATGCTGCAACCCTCGAACTTGTCATTCTCAGCCAACAACTTGGCTTGTACTGGCCTATTTATTTGTCATATCTTACTCTAAGCTTTAATGTAACAAATTTGGAAATTGCAATCATTTCAACAATGTCTATGGAAGAACTATCTGGCGAGTACACCGGCAGGACAAACGGTGGTTTCGATTCCCAAACCGGAGTATACCATTCCCTTTTTAACCTTGGTGACCGTCACAAAATCCCAACAAGGCCTAACCTTGACACTGCCACATTTGTGTTGTCACAGTTCCCTCACCCTCACCAGGCTGAGTCGCGAGTTGCGCTCATTGACTCGGCCACAAACCAGCGAGTCACTTATGCACAACTTCATCGATCGATACAGTCTCTCGCTTCAGGGTTGCACCAAGCACTTGGAGTTCAAAAAGGGGATGTGGTGTTTGTGTTATCACCAAACTCACTCCTATACCCAACAATATGTTTGGCAGTTTTTTCAGTTGGTGCAATACTAACTACTGCCAACCCACTCAACACCGAGTCAGAAATCGCCAAACAAGTCCGCGACTCAGGTGCCAAACTCGCTATTGCATCACCTGAGGAGGTTCACAAGTTGGTCCCAACTGGTGTGCCTACAATTGTAACATCAAGGCCATCAAATGGTACTGATAACTCACTCTCCATTGAAGAGTTGATTGAATCCTGTGATCCAATACCGACCGAGTTAGCACTAGCACGTCCAACTCAGTCGGACACAGCAGCCATATTGTACTCTTCGGGTACAACTGGGACAAGCAAAGGTGTAGTTTTGACACATGCAAATTTCATAGCCATCATGACATTGCTCAAATGGTCTGTGGATGAAACATCAGCTCAAGATGATGTGTTCTTATGCTTCATTCCTATGTTCCACATCTACGGGCTCGCTTTCTTTGCGCTTGGAATGTTTAGCACAGGATCCACCATTGTCCTGATGCAAAGGTTTGAGTTCAAGGCCATGTTGGATGCTATACAAACTCATAAAGTAAATAATATACCCGCAGTGCCTCCGGTGATTCTTGGACTAGTGAAGTATGCAAGCCAAGCCGGGTGCAAGTTGTCATCTTTGAGGAGGGTTGGTTCAGGAGCTGCACCATTGAGCAAAGAAGTGGTTGATGAGTTCAGACAGAAGTTTCCTTGGGTTGAGTTGAGGCCGGGGTATGGCCTAACCGAAAGTTGTGGTGCAGCAACTTTCTTTATTTCGGATGAACAAGCTAATAAACACACTGGCTCATGTGGGCATCTGGTTCCAAAATTCGCTGCTAAGGTTGTGGATATTGAAACCGGACAGGCTTTGGGACCTTATAAGGAAGGAGAGCTGTGGCTGAAGAGTCCGACTATCATGAAAGAGTATTTGGGGAATGTGGAAGCAACTATTGCTACTATTGATGAAGATGGGTGGTTGAAAACTGGTGATCTTTGTTATTTTGATGAGGATGGACTGCTTTACATTGTTGATCGTATCAAGGAGCTCATCAAGCATAATGGCTATCAGGTTGCTCCTGCAGAATTGGAAGCAATTCTCTTGAGCCATCCTCAAATTCTTGATGCTGCTGTCGTACCGGTTGAAGATGAAGAAGCAGGACAAATACCAATGGCATATGTGGTGAGAGCAGCTAGTACTGAACTGATCACTGAAGACCAAGTGGCCCCCTACAAAAAAGTCAGAAAAGTTGGGTTTATATCTGCCATTCCAAGATCAGCTGCAAGCAAAATCTTGAGGAAGGAACTTGTTGGTTTACAAAGCAAACAGCAAATCGTCTCCAGACTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009611 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016053 GO:0019752 GO:0032787 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00592 ko01100 ko01110 map00592 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

609

Amino Acids

66.24

Weight (kDa)

5.6

Isoelectric Point (pI)

39.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	109 - 471	1e-88	AMP-binding enzyme
AMP-binding_C	PF13193	522 - 590	1.5e-11	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005541)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g06560
malus_domestica	MD02G1242900.v1.1 MD07G1073800.v1.1
prunus_persica	Prupe.2G091700_v2.0.a1
pyrus_communis	pycom02g20960
rosa_chinensis	RchiOBHm_Chr1g0334411 RchiOBHm_Chr1g0335091
rosa_laevigata	RLG00000029393 RLG00000029397 RLG00000029398
rosa_multiflora	Rmu_co8496191.1_g000001 Rmu_sc0002714.1_g000004 Rmu_ssc0000047.1_g000022
rosa_roxburghii	Rroxscaffold_4G00316160 Rroxscaffold_4G00316200 Rroxscaffold_4G00316870
rosa_rugosa	Rorug01G0119000 Rorug01G0119100 Rorug01G0119200
rosa_samantha	Rh1AG138600 Rh1AG141800 Rh1BG110300 Rh1BG111200 Rh1CG130600 Rh1CG133700 Rh1DG142900 Rh1DG146600 Rh1DG148100
rosa_wichuraiana	Rw0G013960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1362
AccB1I	GGYRCC	1 cut(s)	590
AccB7I	CCANNNNNTGG	1 cut(s)	677
AccI	GTMKAC	1 cut(s)	225
AccII	CGCG	2 cut(s)	337, 582
AciI	CCGC	2 cut(s)	580, 1056
AclWI	GGATC	3 cut(s)	719, 969, 982
AcoI	YGGCCR	1 cut(s)	357
AcsI	RAATTY	4 cut(s)	127, 838, 1310, 1596
AcuI	CTGAAG	3 cut(s)	399, 1403, 1713
AfaI	GTAC	7 cut(s)	80, 182, 682, 788, 799, 1617, 1678
AfiI	CCNNNNNNNGG	3 cut(s)	325, 677, 1217
AgeI	ACCGGT	1 cut(s)	1618
AgsI	TTSAA	8 cut(s)	150, 443, 704, 716, 1009, 1337, 1462, 1625
AhlI	ACTAGT	1 cut(s)	1081
AjiI	CACGTC	1 cut(s)	755
AjnI	CCWGG	1 cut(s)	324
AjuI	GAANNNNNNNTTGG	2 cut(s)	1394, 1426
AleI	CACNNNNGTG	1 cut(s)	296
AloI	GAACNNNNNNTCC	2 cut(s)	1120, 1152
AluBI	AGCT	8 cut(s)	114, 890, 1145, 1271, 1375, 1528, 1673, 1760
AluI	AGCT	8 cut(s)	114, 890, 1145, 1271, 1375, 1528, 1673, 1760
Alw21I	GWGCWC	1 cut(s)	1530
Alw26I	GTCTC	2 cut(s)	411, 1822
AlwI	GGATC	3 cut(s)	719, 969, 982
AlwNI	CAGNNNCTG	1 cut(s)	1145
AoxI	GGCC	8 cut(s)	83, 272, 357, 668, 1011, 1208, 1219, 1704
ApeKI	GCWGC	8 cut(s)	35, 776, 1145, 1241, 1316, 1607, 1670, 1760
ApoI	RAATTY	4 cut(s)	127, 838, 1310, 1596
AsiGI	ACCGGT	1 cut(s)	1618
Asp700I	GAANNNNTTC	1 cut(s)	1575
AspLEI	GCGC	2 cut(s)	346, 955
AspS9I	GGNCC	3 cut(s)	634, 1355, 1705
AsuC2I	CCSGG	2 cut(s)	1105, 1212
AsuHPI	GGTGA	8 cut(s)	260, 308, 314, 462, 603, 1081, 1481, 1675
AvaII	GGWCC	2 cut(s)	634, 1355
AxyI	CCTNAGG	1 cut(s)	615
BamHI	GGATCC	1 cut(s)	974
BanI	GGYRCC	1 cut(s)	590
BanII	GRGCYC	2 cut(s)	942, 1530
BbsI	GAAGAC	1 cut(s)	1701
Bbv12I	GWGCWC	1 cut(s)	1530
BbvI	GCAGC	8 cut(s)	22, 788, 1132, 1253, 1303, 1594, 1682, 1747
BccI	CCATC	5 cut(s)	679, 857, 1445, 1487, 1596
BcgI	CGANNNNNNTGC	2 cut(s)	572, 606
BciT130I	CCWGG	1 cut(s)	326
BclI	TGATCA	1 cut(s)	1686
BcnI	CCSGG	2 cut(s)	1105, 1212
BcoDI	GTCTC	2 cut(s)	411, 1822
BcuI	ACTAGT	1 cut(s)	1081
BfaI	CTAG	3 cut(s)	749, 1082, 1674
BfmI	CTRYAG	1 cut(s)	1560
BisI	GCNGC	8 cut(s)	36, 777, 1146, 1242, 1317, 1608, 1671, 1761
BlsI	GCNGC	8 cut(s)	37, 778, 1147, 1243, 1318, 1609, 1672, 1762
BmcAI	AGTACT	1 cut(s)	1678
Bme1390I	CCNGG	3 cut(s)	326, 1105, 1212
Bme18I	GGWCC	2 cut(s)	634, 1355
BmgBI	CACGTC	1 cut(s)	755
BmgT120I	GGNCC	3 cut(s)	634, 1355, 1705
BmiI	GGNNCC	6 cut(s)	592, 636, 976, 1305, 1356, 1707
BmrFI	CCNGG	3 cut(s)	326, 1105, 1212
BmrI	ACTGGG	1 cut(s)	813
BmsI	GCATC	5 cut(s)	617, 981, 1012, 1306, 1594
BmuI	ACTGGG	1 cut(s)	813
BpiI	GAAGAC	1 cut(s)	1701
BplI	GAGNNNNNCTC	4 cut(s)	330, 362, 1576, 1608
BpmI	CTGGAG	1 cut(s)	1804
Bpu10I	CCTNAGC	1 cut(s)	1320
BpuEI	CTTGAG	3 cut(s)	876, 1603, 1795
BpuMI	CCSGG	2 cut(s)	1105, 1212
Bsa29I	ATCGAT	2 cut(s)	394, 398
BsaJI	CCNNGG	3 cut(s)	244, 1193, 1211
BsaWI	WCCGGW	4 cut(s)	218, 1066, 1340, 1618
BsaXI	ACNNNNNCTCC	4 cut(s)	680, 710, 1120, 1150
Bsc4I	CCNNNNNNNGG	3 cut(s)	325, 677, 1217
Bse118I	RCCGGY	2 cut(s)	185, 1618
Bse1I	ACTGG	5 cut(s)	86, 646, 808, 1288, 1471
Bse21I	CCTNAGG	1 cut(s)	615
Bse3DI	GCAATG	1 cut(s)	857
BseBI	CCWGG	1 cut(s)	326
BseCI	ATCGAT	2 cut(s)	394, 398
BseDI	CCNNGG	3 cut(s)	244, 1193, 1211
BseGI	GGATG	6 cut(s)	457, 883, 1027, 1267, 1498, 1588
BseLI	CCNNNNNNNGG	3 cut(s)	325, 677, 1217
BseMI	GCAATG	1 cut(s)	857
BseMII	CTCAG	5 cut(s)	73, 321, 600, 606, 776
BseNI	ACTGG	5 cut(s)	86, 646, 808, 1288, 1471
BseRI	GAGGAG	2 cut(s)	632, 1141
BseXI	GCAGC	8 cut(s)	22, 788, 1132, 1253, 1303, 1594, 1682, 1747
BsgI	GTGCAG	2 cut(s)	1131, 1260
Bsh1236I	CGCG	2 cut(s)	337, 582
Bsh1285I	CGRYCG	2 cut(s)	398, 738
BshFI	GGCC	8 cut(s)	85, 274, 359, 670, 1013, 1210, 1221, 1706
BshNI	GGYRCC	1 cut(s)	590
BshTI	ACCGGT	1 cut(s)	1618
BshVI	ATCGAT	2 cut(s)	394, 398
BsiEI	CGRYCG	2 cut(s)	398, 738
BsiHKAI	GWGCWC	1 cut(s)	1530
BsiSI	CCGG	7 cut(s)	186, 219, 1067, 1104, 1211, 1341, 1619
BslFI	GGGAC	3 cut(s)	620, 820, 1368
BslI	CCNNNNNNNGG	3 cut(s)	325, 677, 1217
BsmAI	GTCTC	2 cut(s)	411, 1822
BsmBI	CGTCTC	1 cut(s)	1822
BsmFI	GGGAC	3 cut(s)	620, 820, 1368
BsnI	GGCC	8 cut(s)	85, 274, 359, 670, 1013, 1210, 1221, 1706
Bsp1286I	GDGCHC	2 cut(s)	942, 1530
Bsp143I	GATC	7 cut(s)	395, 724, 974, 1471, 1513, 1686, 1754
Bsp68I	TCGCGA	1 cut(s)	337
BspACI	CCGC	2 cut(s)	580, 1056
BspANI	GGCC	8 cut(s)	85, 274, 359, 670, 1013, 1210, 1221, 1706
BspCNI	CTCAG	5 cut(s)	72, 322, 599, 607, 775
BspDI	ATCGAT	2 cut(s)	394, 398
BspFNI	CGCG	2 cut(s)	337, 582
BspHI	TCATGA	2 cut(s)	852, 1398
BspLI	GGNNCC	6 cut(s)	592, 636, 976, 1305, 1356, 1707
BspMAI	CTGCAG	1 cut(s)	1564
BspPI	GGATC	3 cut(s)	719, 969, 982
BspT107I	GGYRCC	1 cut(s)	590
BsrDI	GCAATG	1 cut(s)	857
BsrFI	RCCGGY	2 cut(s)	185, 1618
BsrI	ACTGG	5 cut(s)	86, 646, 808, 1288, 1471
BssAI	RCCGGY	2 cut(s)	185, 1618
BssECI	CCNNGG	3 cut(s)	244, 1193, 1211
BssMI	GATC	7 cut(s)	395, 724, 974, 1471, 1513, 1686, 1754
BssNAI	GTATAC	1 cut(s)	226
BssT1I	CCWWGG	2 cut(s)	244, 1193
Bst1107I	GTATAC	1 cut(s)	226
Bst2UI	CCWGG	1 cut(s)	326
Bst4CI	ACNGT	4 cut(s)	200, 254, 309, 405
Bst6I	CTCTTC	3 cut(s)	699, 796, 1379
BstAPI	GCANNNNNTGC	1 cut(s)	1433
BstC8I	GCNNGC	3 cut(s)	942, 1096, 1765
BstDEI	CTNAG	8 cut(s)	15, 59, 110, 330, 586, 615, 762, 1320
BstEII	GGTNACC	1 cut(s)	248
BstF5I	GGATG	6 cut(s)	457, 883, 1027, 1267, 1498, 1588
BstFNI	CGCG	2 cut(s)	337, 582
BstHHI	GCGC	2 cut(s)	346, 955
BstKTI	GATC	7 cut(s)	398, 727, 977, 1474, 1516, 1689, 1757
BstMAI	GTCTC	2 cut(s)	411, 1822
BstMBI	GATC	7 cut(s)	395, 724, 974, 1471, 1513, 1686, 1754
BstMCI	CGRYCG	2 cut(s)	398, 738
BstMWI	GCNNNNNNNGC	6 cut(s)	343, 599, 950, 1100, 1433, 1534
BstNI	CCWGG	1 cut(s)	326
BstNSI	RCATGY	1 cut(s)	836
BstPI	GGTNACC	1 cut(s)	248
BstSCI	CCNGG	3 cut(s)	324, 1103, 1210
BstSFI	CTRYAG	1 cut(s)	1560
BstUI	CGCG	2 cut(s)	337, 582
BstV1I	GCAGC	8 cut(s)	22, 788, 1132, 1253, 1303, 1594, 1682, 1747
BstV2I	GAAGAC	1 cut(s)	1701
BstX2I	RGATCY	1 cut(s)	974
BstXI	CCANNNNNNTGG	2 cut(s)	71, 434
BstYI	RGATCY	1 cut(s)	974
BstZ17I	GTATAC	1 cut(s)	226
Bsu15I	ATCGAT	2 cut(s)	394, 398
Bsu36I	CCTNAGG	1 cut(s)	615
BsuRI	GGCC	8 cut(s)	85, 274, 359, 670, 1013, 1210, 1221, 1706
BsuTUI	ATCGAT	2 cut(s)	394, 398
BtrI	CACGTC	1 cut(s)	755
BtsCI	GGATG	6 cut(s)	457, 883, 1027, 1267, 1498, 1588
BtsI	GCAGTG	2 cut(s)	285, 1065
BtsIMutI	CAGTG	4 cut(s)	285, 1065, 1281, 1689
BtuMI	TCGCGA	1 cut(s)	337
Cac8I	GCNNGC	3 cut(s)	942, 1096, 1765
CaiI	CAGNNNCTG	1 cut(s)	1145
CciI	TCATGA	2 cut(s)	852, 1398
CfoI	GCGC	2 cut(s)	346, 955
Cfr10I	RCCGGY	2 cut(s)	185, 1618
Cfr13I	GGNCC	3 cut(s)	634, 1355, 1705
ClaI	ATCGAT	2 cut(s)	394, 398
Csp6I	GTAC	7 cut(s)	79, 181, 681, 787, 798, 1616, 1677
CspAI	ACCGGT	1 cut(s)	1618
CviAII	CATG	5 cut(s)	833, 853, 1015, 1290, 1399
CviQI	GTAC	7 cut(s)	79, 181, 681, 787, 798, 1616, 1677
DdeI	CTNAG	8 cut(s)	15, 59, 110, 330, 586, 615, 762, 1320
DpnI	GATC	7 cut(s)	397, 726, 976, 1473, 1515, 1688, 1756
DpnII	GATC	7 cut(s)	395, 724, 974, 1471, 1513, 1686, 1754
EaeI	YGGCCR	1 cut(s)	357
Eam1104I	CTCTTC	3 cut(s)	699, 796, 1379
EarI	CTCTTC	3 cut(s)	699, 796, 1379
Ecl136II	GAGCTC	1 cut(s)	1528
Eco130I	CCWWGG	2 cut(s)	244, 1193
Eco147I	AGGCCT	1 cut(s)	274
Eco24I	GRGCYC	2 cut(s)	942, 1530
Eco47I	GGWCC	2 cut(s)	634, 1355
Eco53kI	GAGCTC	1 cut(s)	1528
Eco57I	CTGAAG	3 cut(s)	399, 1403, 1713
Eco81I	CCTNAGG	1 cut(s)	615
Eco91I	GGTNACC	1 cut(s)	248
EcoICRI	GAGCTC	1 cut(s)	1528
EcoO109I	RGGNCCY	1 cut(s)	1355
EcoO65I	GGTNACC	1 cut(s)	248
EcoRII	CCWGG	1 cut(s)	324
EcoT14I	CCWWGG	2 cut(s)	244, 1193
EcoT38I	GRGCYC	2 cut(s)	942, 1530
ErhI	CCWWGG	2 cut(s)	244, 1193
Esp3I	CGTCTC	1 cut(s)	1822
FaeI	CATG	5 cut(s)	836, 856, 1018, 1293, 1402
FaqI	GGGAC	3 cut(s)	620, 820, 1368
FatI	CATG	5 cut(s)	832, 852, 1014, 1289, 1398
FauI	CCCGC	1 cut(s)	1063
FauNDI	CATATG	1 cut(s)	1657
FbaI	TGATCA	1 cut(s)	1686
FblI	GTMKAC	1 cut(s)	225
Fnu4HI	GCNGC	8 cut(s)	36, 777, 1146, 1242, 1317, 1608, 1671, 1761
FokI	GGATG	6 cut(s)	464, 890, 1034, 1274, 1505, 1575
FriOI	GRGCYC	2 cut(s)	942, 1530
Fsp4HI	GCNGC	8 cut(s)	36, 777, 1146, 1242, 1317, 1608, 1671, 1761
FspBI	CTAG	3 cut(s)	749, 1082, 1674
GlaI	GCGC	2 cut(s)	345, 954
GluI	GCNGC	8 cut(s)	36, 777, 1146, 1242, 1317, 1608, 1671, 1761
GsuI	CTGGAG	1 cut(s)	1804
HaeIII	GGCC	8 cut(s)	85, 274, 359, 670, 1013, 1210, 1221, 1706
HapII	CCGG	7 cut(s)	186, 219, 1067, 1104, 1211, 1341, 1619
HhaI	GCGC	2 cut(s)	346, 955
Hin1II	CATG	5 cut(s)	836, 856, 1018, 1293, 1402
Hin6I	GCGC	2 cut(s)	344, 953
HinP1I	GCGC	2 cut(s)	344, 953
HindIII	AAGCTT	1 cut(s)	112
HinfI	GANTC	9 cut(s)	209, 332, 353, 372, 557, 584, 716, 1072, 1387
HpaII	CCGG	7 cut(s)	186, 219, 1067, 1104, 1211, 1341, 1619
HphI	GGTGA	8 cut(s)	260, 308, 314, 462, 603, 1081, 1481, 1675
Hpy166II	GTNNAC	4 cut(s)	183, 226, 625, 1796
Hpy188I	TCNGA	6 cut(s)	562, 769, 1181, 1261, 1392, 1724
Hpy8I	GTNNAC	4 cut(s)	183, 226, 625, 1796
HpyAV	CCTTC	2 cut(s)	1361, 1774
HpyCH4III	ACNGT	4 cut(s)	200, 254, 309, 405
HpyCH4IV	ACGT	1 cut(s)	754
HpyF10VI	GCNNNNNNNGC	6 cut(s)	343, 599, 950, 1100, 1433, 1534
HpyF3I	CTNAG	8 cut(s)	15, 59, 110, 330, 586, 615, 762, 1320
HpySE526I	ACGT	1 cut(s)	754
Hsp92II	CATG	5 cut(s)	836, 856, 1018, 1293, 1402
HspAI	GCGC	2 cut(s)	344, 953
Ksp22I	TGATCA	1 cut(s)	1686
Kzo9I	GATC	7 cut(s)	395, 724, 974, 1471, 1513, 1686, 1754
LmnI	GCTCC	3 cut(s)	1142, 1525, 1561
Lsp1109I	GCAGC	8 cut(s)	22, 788, 1132, 1253, 1303, 1594, 1682, 1747
LweI	GCATC	5 cut(s)	617, 981, 1012, 1306, 1594
MaeI	CTAG	3 cut(s)	749, 1082, 1674
MaeII	ACGT	1 cut(s)	754
MaeIII	GTNAC	7 cut(s)	7, 121, 248, 254, 303, 373, 658
MalI	GATC	7 cut(s)	397, 726, 976, 1473, 1515, 1688, 1756
MboI	GATC	7 cut(s)	395, 724, 974, 1471, 1513, 1686, 1754
MboII	GAAGA	8 cut(s)	176, 716, 783, 1396, 1460, 1637, 1643, 1706
MfeI	CAATTG	1 cut(s)	654
MflI	RGATCY	1 cut(s)	974
MhlI	GDGCHC	2 cut(s)	942, 1530
MluCI	AATT	8 cut(s)	127, 135, 654, 838, 1310, 1565, 1575, 1596
MlyI	GAGTC	6 cut(s)	341, 347, 381, 566, 578, 1396
MmeI	TCCRAC	4 cut(s)	747, 782, 999, 1415
MroXI	GAANNNNTTC	1 cut(s)	1575
MseI	TTAA	3 cut(s)	27, 117, 240
MslI	CAYNNNNRTG	2 cut(s)	296, 920
MspA1I	CMGCKG	1 cut(s)	1760
MspI	CCGG	7 cut(s)	186, 219, 1067, 1104, 1211, 1341, 1619
MspR9I	CCNGG	3 cut(s)	326, 1105, 1212
MunI	CAATTG	1 cut(s)	654
MvaI	CCWGG	1 cut(s)	326
MvnI	CGCG	2 cut(s)	337, 582
MwoI	GCNNNNNNNGC	6 cut(s)	343, 599, 950, 1100, 1433, 1534
NciI	CCSGG	2 cut(s)	1105, 1212
NdeI	CATATG	1 cut(s)	1657
NdeII	GATC	7 cut(s)	395, 724, 974, 1471, 1513, 1686, 1754
NlaIII	CATG	5 cut(s)	836, 856, 1018, 1293, 1402
NlaIV	GGNNCC	6 cut(s)	592, 636, 976, 1305, 1356, 1707
NmeAIII	GCCGAG	1 cut(s)	335
NmuCI	GTSAC	4 cut(s)	248, 254, 303, 373
NruI	TCGCGA	1 cut(s)	337
NspI	RCATGY	1 cut(s)	836
OliI	CACNNNNGTG	1 cut(s)	296
PagI	TCATGA	2 cut(s)	852, 1398
PceI	AGGCCT	1 cut(s)	274
PcsI	WCGNNNNNNNCGW	1 cut(s)	204
PdmI	GAANNNNTTC	1 cut(s)	1575
PfeI	GAWTC	3 cut(s)	209, 716, 1072
PflMI	CCANNNNNTGG	1 cut(s)	677
PinAI	ACCGGT	1 cut(s)	1618
PkrI	GCNGC	8 cut(s)	37, 778, 1147, 1243, 1318, 1609, 1672, 1762
Ple19I	CGATCG	1 cut(s)	398
PleI	GAGTC	6 cut(s)	340, 347, 380, 565, 578, 1395
PpsI	GAGTC	6 cut(s)	340, 347, 380, 565, 578, 1395
PpuMI	RGGWCCY	1 cut(s)	1355
PsiI	TTATAA	1 cut(s)	1362
Psp124BI	GAGCTC	1 cut(s)	1530
Psp5II	RGGWCCY	1 cut(s)	1355
Psp6I	CCWGG	1 cut(s)	324
PspEI	GGTNACC	1 cut(s)	248
PspGI	CCWGG	1 cut(s)	324
PspN4I	GGNNCC	6 cut(s)	592, 636, 976, 1305, 1356, 1707
PspPI	GGNCC	3 cut(s)	634, 1355, 1705
PspPPI	RGGWCCY	1 cut(s)	1355
PstI	CTGCAG	1 cut(s)	1564
PstNI	CAGNNNCTG	1 cut(s)	1145
PsuI	RGATCY	1 cut(s)	974
PvuI	CGATCG	1 cut(s)	398
PvuII	CAGCTG	1 cut(s)	1760
RruI	TCGCGA	1 cut(s)	337
RsaI	GTAC	7 cut(s)	80, 182, 682, 788, 799, 1617, 1678
RsaNI	GTAC	7 cut(s)	79, 181, 681, 787, 798, 1616, 1677
RseI	CAYNNNNRTG	2 cut(s)	296, 920
SacI	GAGCTC	1 cut(s)	1530
SaqAI	TTAA	3 cut(s)	27, 117, 240
SatI	GCNGC	8 cut(s)	36, 777, 1146, 1242, 1317, 1608, 1671, 1761
Sau3AI	GATC	7 cut(s)	395, 724, 974, 1471, 1513, 1686, 1754
Sau96I	GGNCC	3 cut(s)	634, 1355, 1705
ScaI	AGTACT	1 cut(s)	1678
SchI	GAGTC	6 cut(s)	341, 347, 381, 566, 578, 1396
ScrFI	CCNGG	3 cut(s)	326, 1105, 1212
SduI	GDGCHC	2 cut(s)	942, 1530
SfaNI	GCATC	5 cut(s)	617, 981, 1012, 1306, 1594
SfcI	CTRYAG	1 cut(s)	1560
SinI	GGWCC	2 cut(s)	634, 1355
SmiMI	CAYNNNNRTG	2 cut(s)	296, 920
SmlI	CTYRAG	3 cut(s)	891, 1582, 1774
SmoI	CTYRAG	3 cut(s)	891, 1582, 1774
SpeI	ACTAGT	1 cut(s)	1081
Sse9I	AATT	8 cut(s)	127, 135, 654, 838, 1310, 1565, 1575, 1596
SseBI	AGGCCT	1 cut(s)	274
SsiI	CCGC	2 cut(s)	580, 1056
SspMI	CTAG	3 cut(s)	749, 1082, 1674
SstI	GAGCTC	1 cut(s)	1530
StuI	AGGCCT	1 cut(s)	274
StyD4I	CCNGG	3 cut(s)	324, 1103, 1210
StyI	CCWWGG	2 cut(s)	244, 1193
TaaI	ACNGT	4 cut(s)	200, 254, 309, 405
TaiI	ACGT	1 cut(s)	757
TaqI	TCGA	4 cut(s)	45, 207, 394, 398
TaqII	GACCGA	1 cut(s)	752
TasI	AATT	8 cut(s)	127, 135, 654, 838, 1310, 1565, 1575, 1596
TatI	WGTACW	4 cut(s)	78, 180, 786, 1676
TfiI	GAWTC	3 cut(s)	209, 716, 1072
Tru1I	TTAA	3 cut(s)	27, 117, 240
Tru9I	TTAA	3 cut(s)	27, 117, 240
TscAI	CASTG	4 cut(s)	292, 1065, 1288, 1696
TseFI	GTSAC	4 cut(s)	248, 254, 303, 373
TseI	GCWGC	8 cut(s)	35, 776, 1145, 1241, 1316, 1607, 1670, 1760
Tsp45I	GTSAC	4 cut(s)	248, 254, 303, 373
TspDTI	ATGAA	8 cut(s)	380, 832, 894, 904, 1278, 1415, 1461, 1644
TspRI	CASTG	4 cut(s)	292, 1065, 1288, 1696
Van91I	CCANNNNNTGG	1 cut(s)	677
VpaK11BI	GGWCC	2 cut(s)	634, 1355
XapI	RAATTY	4 cut(s)	127, 838, 1310, 1596
XceI	RCATGY	1 cut(s)	836
XmiI	GTMKAC	1 cut(s)	225
XmnI	GAANNNNTTC	1 cut(s)	1575
XspI	CTAG	3 cut(s)	749, 1082, 1674
ZrmI	AGTACT	1 cut(s)	1678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.