Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0005541

Physical Location & Seq

Genomic Coordinates Reverse (-)

38041971 .. 38044032

Gene Structure 2062 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029397

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGTCTATGGAAGAACTATCCGGTGAGTACAGCGGCAGAACAAACGGTGGTTTCGATTCCCAAACCGGAGTATACCATTCCCTTTTTAACCTTGGTGACCATCACAAAATCCCAACAAGGCCTAACCTTGACACTGCCACATTTGTGTTGTCACAGTTCCCGCACCCTCACCTGGCCGAGTCGCGAGTTGCACTCATTGACTCGGCCACAAACCAGCGAGTCACTTATGCACAACTTCATCGATCGATACAGTCTCTTGCTTCAGGCTTGCACCAAGCACTTGGAGTTCAAAAAGGGGATGTGGTGTTTGTGTTATCACCAAACTCACTCCTATACCCAACAATATGTTTGGCAGTTTTTTCAGTTGGTGCAATACTAACTACTGCCAACCCACTCAACACCAAGTCAGAAATCGCCAAACAAGTCCGAGACTCAGGTGCCAAACTCGCTATTGCATCACCTGAGGAGGTTCACAAGTTGGTCCCAACTGGTGTGCCTACAATTGTAACATCAAGGCCATCAAATGGTACTGATAACTCACTCTCCATTGAAGAGTTGATTGAATCCTGTGATCCAATACCGACCGAGTTAGCACTAGCACGTCCAACTCAGTCGGACACAGCTGCCATATTGTACTCTTCGGGTACAACTGGGACAAGCAAAGGTGTAGTTTTGACACATGCAAATTTCATAGCCATCATGACATTACTTAAATGGTCTGTGGATGAAACATCAGCTCAAGATGATGTGTTCTTATGCTTCATTCCTATGTTCCACATCTACGGGCTCGCTTTCTTTGCGCTTGGAATGTTTAGCACAGGATCCACCATTGTCCTGATGCAAAGGTTTGAGTTCAAGGCCATGTTGGATGCTATACAAACTCATAAAGTAAATAATATACCCGCAGTGCCTCCGGTGATTCTTGGACTAGTGAAGTACGCAAGCCAAGCCGGGTGCAAGTTGTCATCTTTGAGGAGGGTTGGTTCAGGAGCTGCACCATTGAGCAAAGAAGTGGTTGATGAGTTCAGACAGAAGTTTCCTTGGGTTGAGTTGAGGCCGGGGTATGGCCTAACCGAAAGTTGTGGTGCAGCAACTTTTTTTATTTCGGATGAACAAGCTAAGAAACACACTGGCTCATGTGGGCATCTGGTTGCAAAATTTGCTGCTAAGGTTGTGGATATTGAAACTGGACAGGCTTTGGGACCTTATAAGGAAGGAGAGCTGTGGCTGAAGAGTCCGACTATCATGAAGGAGTATTTGGGGAATGTGGAAGCAACTATTGCTACTATTGATGAAGATGGGTGGTTGAAAACTGGTGATCTTTGTTATTTTGATGAGGATGGACTGCTTTACATTGTTGATCGTATCAAGGAGCTCATCAAGCATAATGGCTATCAGGTTGCTCCTGCAGAATTGGAAGCAATTCTCTTGAGCCATCCTCAAATTCTTGATGCTGCTGTCGTACCGGTTGAAGATGAAGAAGCAGGACAAATACCAATGGCATATGTGGTGAGAGCAGCTAGTACTGAACTGATCACTGAAGACCAAGTAATTCAATTTGTTGCCGGCCAGGTGGCCCCCTACAAAAAAGTCAGAAAAGTTGGGTTTATATCTGCCATTCCAAGATCAGCTGCAAGCAAAATCTTGAGGAAGGAACTTGTTGGTTTACAAAGCAACAGCAAATCGTCTCCAGACTATAATGCCTTTTCCTGCAGGCCAACTTCTTTCATAGAAGATAGAGAGCAAGAGTCATTTTCAGAAAGTGAAATGTCTGATGGACCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006082 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009611 GO:0009694 GO:0009695 GO:0009987 GO:0010817 GO:0016053 GO:0019752 GO:0032787 GO:0042445 GO:0042446 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00592 ko01100 ko01110 map00592 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

595

Amino Acids

64.45

Weight (kDa)

5.4

Isoelectric Point (pI)

42.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	61 - 420	1.5e-87	AMP-binding enzyme
AMP-binding_C	PF13193	471 - 547	2.2e-16	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005541)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g06560
malus_domestica	MD02G1242900.v1.1 MD07G1073800.v1.1
prunus_persica	Prupe.2G091700_v2.0.a1
pyrus_communis	pycom02g20960
rosa_chinensis	RchiOBHm_Chr1g0334411 RchiOBHm_Chr1g0335091
rosa_laevigata	RLG00000029393 RLG00000029397 RLG00000029398
rosa_multiflora	Rmu_co8496191.1_g000001 Rmu_sc0002714.1_g000004 Rmu_ssc0000047.1_g000022
rosa_roxburghii	Rroxscaffold_4G00316160 Rroxscaffold_4G00316200 Rroxscaffold_4G00316870
rosa_rugosa	Rorug01G0119000 Rorug01G0119100 Rorug01G0119200
rosa_samantha	Rh1AG138600 Rh1AG141800 Rh1BG110300 Rh1BG111200 Rh1CG130600 Rh1CG133700 Rh1DG142900 Rh1DG146600 Rh1DG148100
rosa_wichuraiana	Rw0G013960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1209
AccB1I	GGYRCC	1 cut(s)	437
AccB7I	CCANNNNNTGG	1 cut(s)	524
AccI	GTMKAC	1 cut(s)	72
AccII	CGCG	1 cut(s)	184
AciI	CCGC	3 cut(s)	33, 161, 903
AclWI	GGATC	3 cut(s)	566, 816, 829
AcoI	YGGCCR	3 cut(s)	174, 204, 1567
AcsI	RAATTY	3 cut(s)	685, 1157, 1443
AcuI	CTGAAG	3 cut(s)	246, 1250, 1560
AfaI	GTAC	7 cut(s)	29, 529, 635, 646, 938, 1464, 1525
AfiI	CCNNNNNNNGG	3 cut(s)	172, 524, 1064
AgeI	ACCGGT	1 cut(s)	1465
AgsI	TTSAA	8 cut(s)	290, 551, 563, 856, 1184, 1309, 1472, 1556
AhlI	ACTAGT	1 cut(s)	928
AjiI	CACGTC	1 cut(s)	602
AjnI	CCWGG	2 cut(s)	171, 1569
AjuI	GAANNNNNNNTTGG	2 cut(s)	1241, 1273
AleI	CACNNNNGTG	1 cut(s)	143
AloI	GAACNNNNNNTCC	2 cut(s)	967, 999
AluBI	AGCT	8 cut(s)	623, 737, 992, 1118, 1222, 1375, 1520, 1631
AluI	AGCT	8 cut(s)	623, 737, 992, 1118, 1222, 1375, 1520, 1631
Alw21I	GWGCWC	1 cut(s)	1377
Alw26I	GTCTC	3 cut(s)	258, 423, 1692
AlwI	GGATC	3 cut(s)	566, 816, 829
AlwNI	CAGNNNCTG	1 cut(s)	992
ApeKI	GCWGC	7 cut(s)	623, 992, 1088, 1163, 1454, 1517, 1631
ApoI	RAATTY	3 cut(s)	685, 1157, 1443
AsiGI	ACCGGT	1 cut(s)	1465
Asp700I	GAANNNNTTC	1 cut(s)	1422
AspLEI	GCGC	1 cut(s)	802
AspS9I	GGNCC	4 cut(s)	481, 1202, 1576, 1778
AsuC2I	CCSGG	2 cut(s)	952, 1059
AsuHPI	GGTGA	8 cut(s)	35, 107, 161, 309, 450, 928, 1328, 1522
AvaII	GGWCC	3 cut(s)	481, 1202, 1778
AxyI	CCTNAGG	1 cut(s)	462
BamHI	GGATCC	1 cut(s)	821
BanI	GGYRCC	1 cut(s)	437
BanII	GRGCYC	2 cut(s)	789, 1377
BbsI	GAAGAC	1 cut(s)	1548
Bbv12I	GWGCWC	1 cut(s)	1377
BbvI	GCAGC	7 cut(s)	610, 979, 1100, 1150, 1441, 1529, 1618
BccI	CCATC	7 cut(s)	108, 526, 704, 1292, 1334, 1443, 1769
BciT130I	CCWGG	2 cut(s)	173, 1571
BclI	TGATCA	1 cut(s)	1533
BcnI	CCSGG	2 cut(s)	952, 1059
BcoDI	GTCTC	3 cut(s)	258, 423, 1692
BcuI	ACTAGT	1 cut(s)	928
BfaI	CTAG	3 cut(s)	596, 929, 1521
BfmI	CTRYAG	2 cut(s)	1407, 1711
BisI	GCNGC	8 cut(s)	34, 624, 993, 1089, 1164, 1455, 1518, 1632
BlsI	GCNGC	8 cut(s)	35, 625, 994, 1090, 1165, 1456, 1519, 1633
BmcAI	AGTACT	1 cut(s)	1525
Bme1390I	CCNGG	4 cut(s)	173, 952, 1059, 1571
Bme18I	GGWCC	3 cut(s)	481, 1202, 1778
BmgBI	CACGTC	1 cut(s)	602
BmgT120I	GGNCC	4 cut(s)	481, 1202, 1576, 1778
BmiI	GGNNCC	5 cut(s)	439, 483, 823, 1203, 1578
BmrFI	CCNGG	4 cut(s)	173, 952, 1059, 1571
BmrI	ACTGGG	1 cut(s)	660
BmsI	GCATC	5 cut(s)	464, 828, 859, 1153, 1441
BmuI	ACTGGG	1 cut(s)	660
BpiI	GAAGAC	1 cut(s)	1548
BplI	GAGNNNNNCTC	4 cut(s)	177, 209, 1423, 1455
BpmI	CTGGAG	1 cut(s)	1674
Bpu10I	CCTNAGC	1 cut(s)	1167
BpuEI	CTTGAG	3 cut(s)	723, 1450, 1666
BpuMI	CCSGG	2 cut(s)	952, 1059
Bsa29I	ATCGAT	2 cut(s)	241, 245
BsaJI	CCNNGG	3 cut(s)	91, 1040, 1058
BsaWI	WCCGGW	4 cut(s)	20, 65, 913, 1465
BsaXI	ACNNNNNCTCC	4 cut(s)	527, 557, 967, 997
Bsc4I	CCNNNNNNNGG	3 cut(s)	172, 524, 1064
Bse118I	RCCGGY	2 cut(s)	1465, 1565
Bse1I	ACTGG	5 cut(s)	493, 655, 1135, 1192, 1318
Bse21I	CCTNAGG	1 cut(s)	462
BseBI	CCWGG	2 cut(s)	173, 1571
BseCI	ATCGAT	2 cut(s)	241, 245
BseDI	CCNNGG	3 cut(s)	91, 1040, 1058
BseGI	GGATG	6 cut(s)	304, 730, 874, 1114, 1345, 1435
BseLI	CCNNNNNNNGG	3 cut(s)	172, 524, 1064
BseMII	CTCAG	3 cut(s)	447, 453, 623
BseNI	ACTGG	5 cut(s)	493, 655, 1135, 1192, 1318
BseRI	GAGGAG	2 cut(s)	479, 988
BseXI	GCAGC	7 cut(s)	610, 979, 1100, 1150, 1441, 1529, 1618
BsgI	GTGCAG	2 cut(s)	978, 1107
Bsh1236I	CGCG	1 cut(s)	184
Bsh1285I	CGRYCG	2 cut(s)	245, 585
BshNI	GGYRCC	1 cut(s)	437
BshTI	ACCGGT	1 cut(s)	1465
BshVI	ATCGAT	2 cut(s)	241, 245
BsiEI	CGRYCG	2 cut(s)	245, 585
BsiHKAI	GWGCWC	1 cut(s)	1377
BsiSI	CCGG	7 cut(s)	21, 66, 914, 951, 1058, 1466, 1566
BslFI	GGGAC	3 cut(s)	467, 667, 1215
BslI	CCNNNNNNNGG	3 cut(s)	172, 524, 1064
BsmAI	GTCTC	3 cut(s)	258, 423, 1692
BsmBI	CGTCTC	1 cut(s)	1692
BsmFI	GGGAC	3 cut(s)	467, 667, 1215
Bsp1286I	GDGCHC	2 cut(s)	789, 1377
Bsp143I	GATC	7 cut(s)	242, 571, 821, 1318, 1360, 1533, 1625
Bsp68I	TCGCGA	1 cut(s)	184
BspACI	CCGC	3 cut(s)	33, 161, 903
BspCNI	CTCAG	3 cut(s)	446, 454, 622
BspDI	ATCGAT	2 cut(s)	241, 245
BspFNI	CGCG	1 cut(s)	184
BspHI	TCATGA	2 cut(s)	699, 1245
BspLI	GGNNCC	5 cut(s)	439, 483, 823, 1203, 1578
BspMAI	CTGCAG	2 cut(s)	1411, 1715
BspPI	GGATC	3 cut(s)	566, 816, 829
BspT107I	GGYRCC	1 cut(s)	437
BsrFI	RCCGGY	2 cut(s)	1465, 1565
BsrI	ACTGG	5 cut(s)	493, 655, 1135, 1192, 1318
BssAI	RCCGGY	2 cut(s)	1465, 1565
BssECI	CCNNGG	3 cut(s)	91, 1040, 1058
BssMI	GATC	7 cut(s)	242, 571, 821, 1318, 1360, 1533, 1625
BssNAI	GTATAC	1 cut(s)	73
BssT1I	CCWWGG	2 cut(s)	91, 1040
Bst1107I	GTATAC	1 cut(s)	73
Bst2UI	CCWGG	2 cut(s)	173, 1571
Bst4CI	ACNGT	4 cut(s)	47, 156, 252, 1782
Bst6I	CTCTTC	3 cut(s)	546, 643, 1226
BstAPI	GCANNNNNTGC	2 cut(s)	1160, 1280
BstC8I	GCNNGC	6 cut(s)	269, 789, 943, 1567, 1636, 1715
BstDEI	CTNAG	5 cut(s)	433, 462, 609, 1119, 1167
BstEII	GGTNACC	1 cut(s)	95
BstF5I	GGATG	6 cut(s)	304, 730, 874, 1114, 1345, 1435
BstFNI	CGCG	1 cut(s)	184
BstHHI	GCGC	1 cut(s)	802
BstKTI	GATC	7 cut(s)	245, 574, 824, 1321, 1363, 1536, 1628
BstMAI	GTCTC	3 cut(s)	258, 423, 1692
BstMBI	GATC	7 cut(s)	242, 571, 821, 1318, 1360, 1533, 1625
BstMCI	CGRYCG	2 cut(s)	245, 585
BstMWI	GCNNNNNNNGC	6 cut(s)	446, 797, 947, 1160, 1280, 1381
BstNI	CCWGG	2 cut(s)	173, 1571
BstNSI	RCATGY	1 cut(s)	683
BstPI	GGTNACC	1 cut(s)	95
BstSCI	CCNGG	4 cut(s)	171, 950, 1057, 1569
BstSFI	CTRYAG	2 cut(s)	1407, 1711
BstUI	CGCG	1 cut(s)	184
BstV1I	GCAGC	7 cut(s)	610, 979, 1100, 1150, 1441, 1529, 1618
BstV2I	GAAGAC	1 cut(s)	1548
BstX2I	RGATCY	1 cut(s)	821
BstXI	CCANNNNNNTGG	1 cut(s)	281
BstYI	RGATCY	1 cut(s)	821
BstZ17I	GTATAC	1 cut(s)	73
Bsu15I	ATCGAT	2 cut(s)	241, 245
Bsu36I	CCTNAGG	1 cut(s)	462
BsuTUI	ATCGAT	2 cut(s)	241, 245
BtrI	CACGTC	1 cut(s)	602
BtsCI	GGATG	6 cut(s)	304, 730, 874, 1114, 1345, 1435
BtsI	GCAGTG	2 cut(s)	132, 912
BtsIMutI	CAGTG	4 cut(s)	132, 912, 1128, 1536
BtuMI	TCGCGA	1 cut(s)	184
Cac8I	GCNNGC	6 cut(s)	269, 789, 943, 1567, 1636, 1715
CaiI	CAGNNNCTG	1 cut(s)	992
CciI	TCATGA	2 cut(s)	699, 1245
CfoI	GCGC	1 cut(s)	802
Cfr10I	RCCGGY	2 cut(s)	1465, 1565
Cfr13I	GGNCC	4 cut(s)	481, 1202, 1576, 1778
ClaI	ATCGAT	2 cut(s)	241, 245
Csp6I	GTAC	7 cut(s)	28, 528, 634, 645, 937, 1463, 1524
CspAI	ACCGGT	1 cut(s)	1465
CviAII	CATG	5 cut(s)	680, 700, 862, 1137, 1246
CviQI	GTAC	7 cut(s)	28, 528, 634, 645, 937, 1463, 1524
DdeI	CTNAG	5 cut(s)	433, 462, 609, 1119, 1167
DpnI	GATC	7 cut(s)	244, 573, 823, 1320, 1362, 1535, 1627
DpnII	GATC	7 cut(s)	242, 571, 821, 1318, 1360, 1533, 1625
EaeI	YGGCCR	3 cut(s)	174, 204, 1567
Eam1104I	CTCTTC	3 cut(s)	546, 643, 1226
EarI	CTCTTC	3 cut(s)	546, 643, 1226
Ecl136II	GAGCTC	1 cut(s)	1375
Eco130I	CCWWGG	2 cut(s)	91, 1040
Eco147I	AGGCCT	1 cut(s)	121
Eco24I	GRGCYC	2 cut(s)	789, 1377
Eco47I	GGWCC	3 cut(s)	481, 1202, 1778
Eco53kI	GAGCTC	1 cut(s)	1375
Eco57I	CTGAAG	3 cut(s)	246, 1250, 1560
Eco81I	CCTNAGG	1 cut(s)	462
Eco91I	GGTNACC	1 cut(s)	95
EcoICRI	GAGCTC	1 cut(s)	1375
EcoO109I	RGGNCCY	1 cut(s)	1202
EcoO65I	GGTNACC	1 cut(s)	95
EcoRII	CCWGG	2 cut(s)	171, 1569
EcoT14I	CCWWGG	2 cut(s)	91, 1040
EcoT38I	GRGCYC	2 cut(s)	789, 1377
ErhI	CCWWGG	2 cut(s)	91, 1040
Esp3I	CGTCTC	1 cut(s)	1692
FaeI	CATG	5 cut(s)	683, 703, 865, 1140, 1249
FaqI	GGGAC	3 cut(s)	467, 667, 1215
FatI	CATG	5 cut(s)	679, 699, 861, 1136, 1245
FauI	CCCGC	2 cut(s)	168, 910
FauNDI	CATATG	1 cut(s)	1504
FbaI	TGATCA	1 cut(s)	1533
FblI	GTMKAC	1 cut(s)	72
Fnu4HI	GCNGC	8 cut(s)	34, 624, 993, 1089, 1164, 1455, 1518, 1632
FokI	GGATG	6 cut(s)	311, 737, 881, 1121, 1352, 1422
FriOI	GRGCYC	2 cut(s)	789, 1377
Fsp4HI	GCNGC	8 cut(s)	34, 624, 993, 1089, 1164, 1455, 1518, 1632
FspBI	CTAG	3 cut(s)	596, 929, 1521
GlaI	GCGC	1 cut(s)	801
GluI	GCNGC	8 cut(s)	34, 624, 993, 1089, 1164, 1455, 1518, 1632
GsuI	CTGGAG	1 cut(s)	1674
HapII	CCGG	7 cut(s)	21, 66, 914, 951, 1058, 1466, 1566
HhaI	GCGC	1 cut(s)	802
Hin1II	CATG	5 cut(s)	683, 703, 865, 1140, 1249
Hin6I	GCGC	1 cut(s)	800
HinP1I	GCGC	1 cut(s)	800
HinfI	GANTC	9 cut(s)	56, 179, 200, 219, 431, 563, 919, 1234, 1748
HpaII	CCGG	7 cut(s)	21, 66, 914, 951, 1058, 1466, 1566
HphI	GGTGA	8 cut(s)	35, 107, 161, 309, 450, 928, 1328, 1522
Hpy166II	GTNNAC	3 cut(s)	73, 472, 1667
Hpy188I	TCNGA	9 cut(s)	409, 428, 616, 1028, 1108, 1239, 1595, 1759, 1774
Hpy8I	GTNNAC	3 cut(s)	73, 472, 1667
HpyAV	CCTTC	3 cut(s)	1208, 1243, 1645
HpyCH4III	ACNGT	4 cut(s)	47, 156, 252, 1782
HpyCH4IV	ACGT	1 cut(s)	601
HpyF10VI	GCNNNNNNNGC	6 cut(s)	446, 797, 947, 1160, 1280, 1381
HpyF3I	CTNAG	5 cut(s)	433, 462, 609, 1119, 1167
HpySE526I	ACGT	1 cut(s)	601
Hsp92II	CATG	5 cut(s)	683, 703, 865, 1140, 1249
HspAI	GCGC	1 cut(s)	800
KroI	GCCGGC	1 cut(s)	1565
KroNI	GCCGGC	1 cut(s)	1567
Ksp22I	TGATCA	1 cut(s)	1533
Kzo9I	GATC	7 cut(s)	242, 571, 821, 1318, 1360, 1533, 1625
LmnI	GCTCC	3 cut(s)	989, 1372, 1408
Lsp1109I	GCAGC	7 cut(s)	610, 979, 1100, 1150, 1441, 1529, 1618
LweI	GCATC	5 cut(s)	464, 828, 859, 1153, 1441
MaeI	CTAG	3 cut(s)	596, 929, 1521
MaeII	ACGT	1 cut(s)	601
MaeIII	GTNAC	4 cut(s)	95, 150, 220, 505
MalI	GATC	7 cut(s)	244, 573, 823, 1320, 1362, 1535, 1627
MboI	GATC	7 cut(s)	242, 571, 821, 1318, 1360, 1533, 1625
MboII	GAAGA	9 cut(s)	23, 563, 630, 1243, 1307, 1484, 1490, 1553, 1745
MfeI	CAATTG	1 cut(s)	501
MflI	RGATCY	1 cut(s)	821
MhlI	GDGCHC	2 cut(s)	789, 1377
MluCI	AATT	8 cut(s)	501, 685, 1157, 1412, 1422, 1443, 1551, 1556
MlyI	GAGTC	6 cut(s)	188, 194, 228, 425, 1243, 1757
MmeI	TCCRAC	4 cut(s)	594, 629, 846, 1262
MroNI	GCCGGC	1 cut(s)	1565
MroXI	GAANNNNTTC	1 cut(s)	1422
MseI	TTAA	2 cut(s)	87, 711
MslI	CAYNNNNRTG	2 cut(s)	143, 767
MspA1I	CMGCKG	3 cut(s)	33, 623, 1631
MspI	CCGG	7 cut(s)	21, 66, 914, 951, 1058, 1466, 1566
MspR9I	CCNGG	4 cut(s)	173, 952, 1059, 1571
MunI	CAATTG	1 cut(s)	501
MvaI	CCWGG	2 cut(s)	173, 1571
MvnI	CGCG	1 cut(s)	184
MwoI	GCNNNNNNNGC	6 cut(s)	446, 797, 947, 1160, 1280, 1381
NaeI	GCCGGC	1 cut(s)	1567
NciI	CCSGG	2 cut(s)	952, 1059
NdeI	CATATG	1 cut(s)	1504
NdeII	GATC	7 cut(s)	242, 571, 821, 1318, 1360, 1533, 1625
NgoMIV	GCCGGC	1 cut(s)	1565
NlaIII	CATG	5 cut(s)	683, 703, 865, 1140, 1249
NlaIV	GGNNCC	5 cut(s)	439, 483, 823, 1203, 1578
NmeAIII	GCCGAG	2 cut(s)	182, 202
NmuCI	GTSAC	3 cut(s)	95, 150, 220
NruI	TCGCGA	1 cut(s)	184
NspI	RCATGY	1 cut(s)	683
OliI	CACNNNNGTG	1 cut(s)	143
PagI	TCATGA	2 cut(s)	699, 1245
PceI	AGGCCT	1 cut(s)	121
PcsI	WCGNNNNNNNCGW	1 cut(s)	51
PdiI	GCCGGC	1 cut(s)	1567
PdmI	GAANNNNTTC	1 cut(s)	1422
PfeI	GAWTC	3 cut(s)	56, 563, 919
PflMI	CCANNNNNTGG	1 cut(s)	524
PinAI	ACCGGT	1 cut(s)	1465
PkrI	GCNGC	8 cut(s)	35, 625, 994, 1090, 1165, 1456, 1519, 1633
Ple19I	CGATCG	1 cut(s)	245
PleI	GAGTC	6 cut(s)	187, 194, 227, 425, 1242, 1756
PpsI	GAGTC	6 cut(s)	187, 194, 227, 425, 1242, 1756
PpuMI	RGGWCCY	1 cut(s)	1202
PsiI	TTATAA	1 cut(s)	1209
Psp124BI	GAGCTC	1 cut(s)	1377
Psp5II	RGGWCCY	1 cut(s)	1202
Psp6I	CCWGG	2 cut(s)	171, 1569
PspEI	GGTNACC	1 cut(s)	95
PspGI	CCWGG	2 cut(s)	171, 1569
PspN4I	GGNNCC	5 cut(s)	439, 483, 823, 1203, 1578
PspPI	GGNCC	4 cut(s)	481, 1202, 1576, 1778
PspPPI	RGGWCCY	1 cut(s)	1202
PstI	CTGCAG	2 cut(s)	1411, 1715
PstNI	CAGNNNCTG	1 cut(s)	992
PsuI	RGATCY	1 cut(s)	821
PvuI	CGATCG	1 cut(s)	245
PvuII	CAGCTG	2 cut(s)	623, 1631
RruI	TCGCGA	1 cut(s)	184
RsaI	GTAC	7 cut(s)	29, 529, 635, 646, 938, 1464, 1525
RsaNI	GTAC	7 cut(s)	28, 528, 634, 645, 937, 1463, 1524
RseI	CAYNNNNRTG	2 cut(s)	143, 767
SacI	GAGCTC	1 cut(s)	1377
SaqAI	TTAA	2 cut(s)	87, 711
SatI	GCNGC	8 cut(s)	34, 624, 993, 1089, 1164, 1455, 1518, 1632
Sau3AI	GATC	7 cut(s)	242, 571, 821, 1318, 1360, 1533, 1625
Sau96I	GGNCC	4 cut(s)	481, 1202, 1576, 1778
SbfI	CCTGCAGG	1 cut(s)	1715
ScaI	AGTACT	1 cut(s)	1525
SchI	GAGTC	6 cut(s)	188, 194, 228, 425, 1243, 1757
ScrFI	CCNGG	4 cut(s)	173, 952, 1059, 1571
SdaI	CCTGCAGG	1 cut(s)	1715
SduI	GDGCHC	2 cut(s)	789, 1377
SfaNI	GCATC	5 cut(s)	464, 828, 859, 1153, 1441
SfcI	CTRYAG	2 cut(s)	1407, 1711
SinI	GGWCC	3 cut(s)	481, 1202, 1778
SmiMI	CAYNNNNRTG	2 cut(s)	143, 767
SmlI	CTYRAG	3 cut(s)	738, 1429, 1645
SmoI	CTYRAG	3 cut(s)	738, 1429, 1645
SpeI	ACTAGT	1 cut(s)	928
Sse8387I	CCTGCAGG	1 cut(s)	1715
Sse9I	AATT	8 cut(s)	501, 685, 1157, 1412, 1422, 1443, 1551, 1556
SseBI	AGGCCT	1 cut(s)	121
SsiI	CCGC	3 cut(s)	33, 161, 903
SspMI	CTAG	3 cut(s)	596, 929, 1521
SstI	GAGCTC	1 cut(s)	1377
StuI	AGGCCT	1 cut(s)	121
StyD4I	CCNGG	4 cut(s)	171, 950, 1057, 1569
StyI	CCWWGG	2 cut(s)	91, 1040
TaaI	ACNGT	4 cut(s)	47, 156, 252, 1782
TaiI	ACGT	1 cut(s)	604
TaqI	TCGA	3 cut(s)	54, 241, 245
TaqII	GACCGA	1 cut(s)	599
TasI	AATT	8 cut(s)	501, 685, 1157, 1412, 1422, 1443, 1551, 1556
TatI	WGTACW	3 cut(s)	27, 633, 1523
TauI	GCSGC	1 cut(s)	36
TfiI	GAWTC	3 cut(s)	56, 563, 919
Tru1I	TTAA	2 cut(s)	87, 711
Tru9I	TTAA	2 cut(s)	87, 711
TscAI	CASTG	4 cut(s)	139, 912, 1135, 1543
TseFI	GTSAC	3 cut(s)	95, 150, 220
TseI	GCWGC	7 cut(s)	623, 992, 1088, 1163, 1454, 1517, 1631
Tsp45I	GTSAC	3 cut(s)	95, 150, 220
TspDTI	ATGAA	9 cut(s)	227, 679, 741, 751, 1125, 1262, 1308, 1491, 1717
TspRI	CASTG	4 cut(s)	139, 912, 1135, 1543
Van91I	CCANNNNNTGG	1 cut(s)	524
VpaK11BI	GGWCC	3 cut(s)	481, 1202, 1778
XapI	RAATTY	3 cut(s)	685, 1157, 1443
XceI	RCATGY	1 cut(s)	683
XmiI	GTMKAC	1 cut(s)	72
XmnI	GAANNNNTTC	1 cut(s)	1422
XspI	CTAG	3 cut(s)	596, 929, 1521
ZrmI	AGTACT	1 cut(s)	1525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.