PAS fold
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g27651 |
| rosa_chinensis | RchiOBHm_Chr1g0330501 RchiOBHm_Chr1g0341541 RchiOBHm_Chr3g0493181 RchiOBHm_Chr5g0068631 RchiOBHm_Chr7g0200611 RchiOBHm_Chr7g0235681 RchiOBHm_Chr7g0242661 |
| rosa_multiflora | Rmu_sc0002539.1_g000024 |
| rosa_roxburghii | Rroxscaffold_1G00071600 Rroxscaffold_3G00223660 Rroxscaffold_5G00346520 Rroxscaffold_5G00366050 |
| rosa_rugosa | Rorug05G0582300 |
| rosa_samantha | Rh3AG308700 Rh4BG032100 Rh5AG071000 Rh5AG405200 Rh5CG079900 Rh7AG127500 Rh7CG198000 |
| rosa_wichuraiana | Rw1G003250 Rw5G028180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 99 |
| AfaI | GTAC | 1 cut(s) | 30 |
| Alw26I | GTCTC | 1 cut(s) | 110 |
| ApeKI | GCWGC | 1 cut(s) | 140 |
| BbvI | GCAGC | 1 cut(s) | 152 |
| BccI | CCATC | 1 cut(s) | 32 |
| BclI | TGATCA | 1 cut(s) | 7 |
| BcoDI | GTCTC | 1 cut(s) | 110 |
| BfmI | CTRYAG | 1 cut(s) | 120 |
| BisI | GCNGC | 1 cut(s) | 141 |
| BlsI | GCNGC | 1 cut(s) | 142 |
| Bse1I | ACTGG | 1 cut(s) | 111 |
| BseNI | ACTGG | 1 cut(s) | 111 |
| BseXI | GCAGC | 1 cut(s) | 152 |
| BsmAI | GTCTC | 1 cut(s) | 110 |
| Bsp143I | GATC | 1 cut(s) | 7 |
| BspMAI | CTGCAG | 1 cut(s) | 124 |
| BsrI | ACTGG | 1 cut(s) | 111 |
| BssMI | GATC | 1 cut(s) | 7 |
| Bst4CI | ACNGT | 1 cut(s) | 88 |
| BstKTI | GATC | 1 cut(s) | 10 |
| BstMAI | GTCTC | 1 cut(s) | 110 |
| BstMBI | GATC | 1 cut(s) | 7 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 55 |
| BstSFI | CTRYAG | 1 cut(s) | 120 |
| BstV1I | GCAGC | 1 cut(s) | 152 |
| Csp6I | GTAC | 1 cut(s) | 29 |
| CviJI | RGCY | 1 cut(s) | 58 |
| CviKI_1 | RGCY | 1 cut(s) | 58 |
| CviQI | GTAC | 1 cut(s) | 29 |
| DpnI | GATC | 1 cut(s) | 9 |
| DpnII | GATC | 1 cut(s) | 7 |
| Eco57I | CTGAAG | 1 cut(s) | 99 |
| FaiI | YATR | 1 cut(s) | 66 |
| FbaI | TGATCA | 1 cut(s) | 7 |
| Fnu4HI | GCNGC | 1 cut(s) | 141 |
| Fsp4HI | GCNGC | 1 cut(s) | 141 |
| FspEI | CC | 7 cut(s) | 9, 24, 72, 90, 92, 122, 139 |
| GluI | GCNGC | 1 cut(s) | 141 |
| Hpy188III | TCNNGA | 1 cut(s) | 77 |
| HpyCH4III | ACNGT | 1 cut(s) | 88 |
| HpyCH4V | TGCA | 3 cut(s) | 64, 122, 181 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 55 |
| Ksp22I | TGATCA | 1 cut(s) | 7 |
| Kzo9I | GATC | 1 cut(s) | 7 |
| LpnPI | CCDG | 2 cut(s) | 90, 92 |
| Lsp1109I | GCAGC | 1 cut(s) | 152 |
| MaeIII | GTNAC | 1 cut(s) | 82 |
| MalI | GATC | 1 cut(s) | 9 |
| MboI | GATC | 1 cut(s) | 7 |
| MboII | GAAGA | 1 cut(s) | 184 |
| MnlI | CCTC | 2 cut(s) | 69, 130 |
| MseI | TTAA | 1 cut(s) | 126 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 55 |
| NdeII | GATC | 1 cut(s) | 7 |
| PkrI | GCNGC | 1 cut(s) | 142 |
| PstI | CTGCAG | 1 cut(s) | 124 |
| RsaI | GTAC | 1 cut(s) | 30 |
| RsaNI | GTAC | 1 cut(s) | 29 |
| SaqAI | TTAA | 1 cut(s) | 126 |
| SatI | GCNGC | 1 cut(s) | 141 |
| Sau3AI | GATC | 1 cut(s) | 7 |
| SfcI | CTRYAG | 1 cut(s) | 120 |
| SgeI | CNNG | 6 cut(s) | 17, 47, 89, 119, 156, 178 |
| SspI | AATATT | 1 cut(s) | 17 |
| TaaI | ACNGT | 1 cut(s) | 88 |
| TatI | WGTACW | 1 cut(s) | 28 |
| Tru1I | TTAA | 1 cut(s) | 126 |
| Tru9I | TTAA | 1 cut(s) | 126 |
| TseI | GCWGC | 1 cut(s) | 140 |