PAS fold
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g27651 |
| rosa_chinensis | RchiOBHm_Chr1g0330501 RchiOBHm_Chr1g0341541 RchiOBHm_Chr3g0493181 RchiOBHm_Chr5g0068631 RchiOBHm_Chr7g0200611 RchiOBHm_Chr7g0235681 RchiOBHm_Chr7g0242661 |
| rosa_multiflora | Rmu_sc0002539.1_g000024 |
| rosa_roxburghii | Rroxscaffold_1G00071600 Rroxscaffold_3G00223660 Rroxscaffold_5G00346520 Rroxscaffold_5G00366050 |
| rosa_rugosa | Rorug05G0582300 |
| rosa_samantha | Rh3AG308700 Rh4BG032100 Rh5AG071000 Rh5AG405200 Rh5CG079900 Rh7AG127500 Rh7CG198000 |
| rosa_wichuraiana | Rw1G003250 Rw5G028180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 117 |
| AfaI | GTAC | 3 cut(s) | 30, 48, 348 |
| AgsI | TTSAA | 2 cut(s) | 272, 307 |
| AluBI | AGCT | 2 cut(s) | 8, 266 |
| AluI | AGCT | 2 cut(s) | 8, 266 |
| Alw26I | GTCTC | 1 cut(s) | 128 |
| ApeKI | GCWGC | 1 cut(s) | 158 |
| AsuII | TTCGAA | 1 cut(s) | 215 |
| BbvI | GCAGC | 1 cut(s) | 170 |
| BccI | CCATC | 1 cut(s) | 50 |
| BcoDI | GTCTC | 1 cut(s) | 128 |
| BfaI | CTAG | 2 cut(s) | 191, 281 |
| BfmI | CTRYAG | 1 cut(s) | 138 |
| BisI | GCNGC | 1 cut(s) | 159 |
| BlsI | GCNGC | 1 cut(s) | 160 |
| BmsI | GCATC | 1 cut(s) | 166 |
| Bpu14I | TTCGAA | 1 cut(s) | 215 |
| BsaJI | CCNNGG | 2 cut(s) | 257, 330 |
| Bse1I | ACTGG | 1 cut(s) | 129 |
| BseDI | CCNNGG | 2 cut(s) | 257, 330 |
| BseGI | GGATG | 2 cut(s) | 210, 226 |
| BseNI | ACTGG | 1 cut(s) | 129 |
| BseXI | GCAGC | 1 cut(s) | 170 |
| BslFI | GGGAC | 1 cut(s) | 260 |
| BsmAI | GTCTC | 1 cut(s) | 128 |
| BsmFI | GGGAC | 1 cut(s) | 260 |
| Bsp119I | TTCGAA | 1 cut(s) | 215 |
| BspMAI | CTGCAG | 1 cut(s) | 142 |
| BspT104I | TTCGAA | 1 cut(s) | 215 |
| BsrI | ACTGG | 1 cut(s) | 129 |
| BssECI | CCNNGG | 2 cut(s) | 257, 330 |
| BssT1I | CCWWGG | 2 cut(s) | 257, 330 |
| Bst4CI | ACNGT | 3 cut(s) | 33, 106, 287 |
| BstBI | TTCGAA | 1 cut(s) | 215 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstF5I | GGATG | 2 cut(s) | 210, 226 |
| BstMAI | GTCTC | 1 cut(s) | 128 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 73, 316, 325 |
| BstSFI | CTRYAG | 1 cut(s) | 138 |
| BstV1I | GCAGC | 1 cut(s) | 170 |
| BtsCI | GGATG | 2 cut(s) | 210, 226 |
| BtsIMutI | CAGTG | 1 cut(s) | 292 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| Csp6I | GTAC | 3 cut(s) | 29, 47, 347 |
| CviJI | RGCY | 7 cut(s) | 8, 76, 235, 252, 266, 319, 328 |
| CviKI_1 | RGCY | 7 cut(s) | 8, 76, 235, 252, 266, 319, 328 |
| CviQI | GTAC | 3 cut(s) | 29, 47, 347 |
| DraI | TTTAAA | 1 cut(s) | 16 |
| Eco130I | CCWWGG | 2 cut(s) | 257, 330 |
| Eco57I | CTGAAG | 1 cut(s) | 117 |
| EcoT14I | CCWWGG | 2 cut(s) | 257, 330 |
| ErhI | CCWWGG | 2 cut(s) | 257, 330 |
| FaiI | YATR | 7 cut(s) | 84, 185, 202, 240, 323, 339, 345 |
| FaqI | GGGAC | 1 cut(s) | 260 |
| Fnu4HI | GCNGC | 1 cut(s) | 159 |
| FokI | GGATG | 2 cut(s) | 213, 217 |
| Fsp4HI | GCNGC | 1 cut(s) | 159 |
| FspBI | CTAG | 2 cut(s) | 191, 281 |
| GluI | GCNGC | 1 cut(s) | 159 |
| HindIII | AAGCTT | 1 cut(s) | 6 |
| HinfI | GANTC | 2 cut(s) | 208, 277 |
| Hpy188III | TCNNGA | 3 cut(s) | 95, 173, 281 |
| HpyAV | CCTTC | 1 cut(s) | 211 |
| HpyCH4III | ACNGT | 3 cut(s) | 33, 106, 287 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 82, 140 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 73, 316, 325 |
| LpnPI | CCDG | 3 cut(s) | 108, 110, 186 |
| Lsp1109I | GCAGC | 1 cut(s) | 170 |
| LweI | GCATC | 1 cut(s) | 166 |
| MaeI | CTAG | 2 cut(s) | 191, 281 |
| MaeIII | GTNAC | 1 cut(s) | 100 |
| MboII | GAAGA | 1 cut(s) | 206 |
| MnlI | CCTC | 3 cut(s) | 87, 148, 246 |
| MseI | TTAA | 3 cut(s) | 15, 144, 315 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 73, 316, 325 |
| NspV | TTCGAA | 1 cut(s) | 215 |
| PfeI | GAWTC | 2 cut(s) | 208, 277 |
| PkrI | GCNGC | 1 cut(s) | 160 |
| PstI | CTGCAG | 1 cut(s) | 142 |
| RsaI | GTAC | 3 cut(s) | 30, 48, 348 |
| RsaNI | GTAC | 3 cut(s) | 29, 47, 347 |
| SaqAI | TTAA | 3 cut(s) | 15, 144, 315 |
| SatI | GCNGC | 1 cut(s) | 159 |
| SetI | ASST | 3 cut(s) | 10, 222, 268 |
| SfaNI | GCATC | 1 cut(s) | 166 |
| SfcI | CTRYAG | 1 cut(s) | 138 |
| SfuI | TTCGAA | 1 cut(s) | 215 |
| SspMI | CTAG | 2 cut(s) | 191, 281 |
| StyI | CCWWGG | 2 cut(s) | 257, 330 |
| TaaI | ACNGT | 3 cut(s) | 33, 106, 287 |
| TaqI | TCGA | 1 cut(s) | 215 |
| TatI | WGTACW | 3 cut(s) | 28, 46, 346 |
| TfiI | GAWTC | 2 cut(s) | 208, 277 |
| Tru1I | TTAA | 3 cut(s) | 15, 144, 315 |
| Tru9I | TTAA | 3 cut(s) | 15, 144, 315 |
| TscAI | CASTG | 1 cut(s) | 292 |
| TseI | GCWGC | 1 cut(s) | 158 |
| TspDTI | ATGAA | 3 cut(s) | 200, 215, 221 |
| TspRI | CASTG | 1 cut(s) | 292 |
| XbaI | TCTAGA | 1 cut(s) | 280 |
| XspI | CTAG | 2 cut(s) | 191, 281 |