PAS fold
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g27651 |
| rosa_chinensis | RchiOBHm_Chr1g0330501 RchiOBHm_Chr1g0341541 RchiOBHm_Chr3g0493181 RchiOBHm_Chr5g0068631 RchiOBHm_Chr7g0200611 RchiOBHm_Chr7g0235681 RchiOBHm_Chr7g0242661 |
| rosa_multiflora | Rmu_sc0002539.1_g000024 |
| rosa_roxburghii | Rroxscaffold_1G00071600 Rroxscaffold_3G00223660 Rroxscaffold_5G00346520 Rroxscaffold_5G00366050 |
| rosa_rugosa | Rorug05G0582300 |
| rosa_samantha | Rh3AG308700 Rh4BG032100 Rh5AG071000 Rh5AG405200 Rh5CG079900 Rh7AG127500 Rh7CG198000 |
| rosa_wichuraiana | Rw1G003250 Rw5G028180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 159 |
| AclWI | GGATC | 1 cut(s) | 160 |
| AgsI | TTSAA | 2 cut(s) | 89, 124 |
| AluBI | AGCT | 1 cut(s) | 83 |
| AluI | AGCT | 1 cut(s) | 83 |
| AlwI | GGATC | 1 cut(s) | 160 |
| AsuHPI | GGTGA | 1 cut(s) | 170 |
| AsuII | TTCGAA | 1 cut(s) | 32 |
| BfaI | CTAG | 1 cut(s) | 98 |
| BfuAI | ACCTGC | 1 cut(s) | 159 |
| Bpu14I | TTCGAA | 1 cut(s) | 32 |
| BsaJI | CCNNGG | 2 cut(s) | 74, 147 |
| Bse1I | ACTGG | 1 cut(s) | 169 |
| BseDI | CCNNGG | 2 cut(s) | 74, 147 |
| BseGI | GGATG | 2 cut(s) | 27, 43 |
| BseNI | ACTGG | 1 cut(s) | 169 |
| BslFI | GGGAC | 1 cut(s) | 77 |
| BsmFI | GGGAC | 1 cut(s) | 77 |
| Bsp119I | TTCGAA | 1 cut(s) | 32 |
| Bsp143I | GATC | 1 cut(s) | 152 |
| BspMI | ACCTGC | 1 cut(s) | 159 |
| BspPI | GGATC | 1 cut(s) | 160 |
| BspT104I | TTCGAA | 1 cut(s) | 32 |
| BsrI | ACTGG | 1 cut(s) | 169 |
| BssECI | CCNNGG | 2 cut(s) | 74, 147 |
| BssMI | GATC | 1 cut(s) | 152 |
| BssT1I | CCWWGG | 2 cut(s) | 74, 147 |
| Bst4CI | ACNGT | 1 cut(s) | 104 |
| BstBI | TTCGAA | 1 cut(s) | 32 |
| BstF5I | GGATG | 2 cut(s) | 27, 43 |
| BstKTI | GATC | 1 cut(s) | 155 |
| BstMBI | GATC | 1 cut(s) | 152 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 133, 142 |
| BstX2I | RGATCY | 1 cut(s) | 152 |
| BstYI | RGATCY | 1 cut(s) | 152 |
| BtsCI | GGATG | 2 cut(s) | 27, 43 |
| BtsIMutI | CAGTG | 1 cut(s) | 109 |
| BveI | ACCTGC | 1 cut(s) | 159 |
| CviJI | RGCY | 5 cut(s) | 52, 69, 83, 136, 145 |
| CviKI_1 | RGCY | 5 cut(s) | 52, 69, 83, 136, 145 |
| DpnI | GATC | 1 cut(s) | 154 |
| DpnII | GATC | 1 cut(s) | 152 |
| Eco130I | CCWWGG | 2 cut(s) | 74, 147 |
| EcoT14I | CCWWGG | 2 cut(s) | 74, 147 |
| ErhI | CCWWGG | 2 cut(s) | 74, 147 |
| FaiI | YATR | 6 cut(s) | 19, 57, 114, 116, 140, 178 |
| FaqI | GGGAC | 1 cut(s) | 77 |
| FokI | GGATG | 2 cut(s) | 30, 34 |
| FspBI | CTAG | 1 cut(s) | 98 |
| HinfI | GANTC | 2 cut(s) | 25, 94 |
| HphI | GGTGA | 1 cut(s) | 170 |
| Hpy188III | TCNNGA | 1 cut(s) | 98 |
| HpyAV | CCTTC | 1 cut(s) | 28 |
| HpyCH4III | ACNGT | 1 cut(s) | 104 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 133, 142 |
| Kzo9I | GATC | 1 cut(s) | 152 |
| LpnPI | CCDG | 4 cut(s) | 21, 141, 150, 154 |
| MaeI | CTAG | 1 cut(s) | 98 |
| MalI | GATC | 1 cut(s) | 154 |
| MboI | GATC | 1 cut(s) | 152 |
| MboII | GAAGA | 1 cut(s) | 23 |
| MflI | RGATCY | 1 cut(s) | 152 |
| MnlI | CCTC | 1 cut(s) | 63 |
| MseI | TTAA | 2 cut(s) | 132, 181 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 133, 142 |
| NdeII | GATC | 1 cut(s) | 152 |
| NspV | TTCGAA | 1 cut(s) | 32 |
| PfeI | GAWTC | 2 cut(s) | 25, 94 |
| PsuI | RGATCY | 1 cut(s) | 152 |
| SaqAI | TTAA | 2 cut(s) | 132, 181 |
| Sau3AI | GATC | 1 cut(s) | 152 |
| SetI | ASST | 3 cut(s) | 39, 85, 173 |
| SfuI | TTCGAA | 1 cut(s) | 32 |
| SgeI | CNNG | 7 cut(s) | 20, 74, 87, 110, 160, 168, 177 |
| SspMI | CTAG | 1 cut(s) | 98 |
| StyI | CCWWGG | 2 cut(s) | 74, 147 |
| TaaI | ACNGT | 1 cut(s) | 104 |
| TaqI | TCGA | 1 cut(s) | 32 |
| TfiI | GAWTC | 2 cut(s) | 25, 94 |
| Tru1I | TTAA | 2 cut(s) | 132, 181 |
| Tru9I | TTAA | 2 cut(s) | 132, 181 |
| TscAI | CASTG | 1 cut(s) | 109 |
| TspDTI | ATGAA | 3 cut(s) | 17, 32, 38 |
| TspRI | CASTG | 1 cut(s) | 109 |
| XbaI | TCTAGA | 1 cut(s) | 97 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 15 |
| XspI | CTAG | 1 cut(s) | 98 |