PAS fold
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g27651 |
| rosa_chinensis | RchiOBHm_Chr1g0330501 RchiOBHm_Chr1g0341541 RchiOBHm_Chr3g0493181 RchiOBHm_Chr5g0068631 RchiOBHm_Chr7g0200611 RchiOBHm_Chr7g0235681 RchiOBHm_Chr7g0242661 |
| rosa_multiflora | Rmu_sc0002539.1_g000024 |
| rosa_roxburghii | Rroxscaffold_1G00071600 Rroxscaffold_3G00223660 Rroxscaffold_5G00346520 Rroxscaffold_5G00366050 |
| rosa_rugosa | Rorug05G0582300 |
| rosa_samantha | Rh3AG308700 Rh4BG032100 Rh5AG071000 Rh5AG405200 Rh5CG079900 Rh7AG127500 Rh7CG198000 |
| rosa_wichuraiana | Rw1G003250 Rw5G028180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 77 |
| AcuI | CTGAAG | 1 cut(s) | 138 |
| AfaI | GTAC | 2 cut(s) | 51, 69 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 77 |
| AgsI | TTSAA | 2 cut(s) | 14, 292 |
| AluBI | AGCT | 2 cut(s) | 29, 286 |
| AluI | AGCT | 2 cut(s) | 29, 286 |
| Alw26I | GTCTC | 1 cut(s) | 149 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| AsuII | TTCGAA | 1 cut(s) | 236 |
| BbvI | GCAGC | 1 cut(s) | 191 |
| BccI | CCATC | 1 cut(s) | 71 |
| BcoDI | GTCTC | 1 cut(s) | 149 |
| BfaI | CTAG | 1 cut(s) | 301 |
| BfmI | CTRYAG | 1 cut(s) | 159 |
| BisI | GCNGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 1 cut(s) | 181 |
| Bpu14I | TTCGAA | 1 cut(s) | 236 |
| BsaJI | CCNNGG | 1 cut(s) | 277 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 77 |
| Bse1I | ACTGG | 1 cut(s) | 150 |
| BseDI | CCNNGG | 1 cut(s) | 277 |
| BseGI | GGATG | 2 cut(s) | 231, 247 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 77 |
| BseNI | ACTGG | 1 cut(s) | 150 |
| BseXI | GCAGC | 1 cut(s) | 191 |
| BslFI | GGGAC | 1 cut(s) | 281 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 77 |
| BsmAI | GTCTC | 1 cut(s) | 149 |
| BsmFI | GGGAC | 1 cut(s) | 281 |
| Bsp119I | TTCGAA | 1 cut(s) | 236 |
| BspMAI | CTGCAG | 1 cut(s) | 163 |
| BspT104I | TTCGAA | 1 cut(s) | 236 |
| BsrI | ACTGG | 1 cut(s) | 150 |
| BssECI | CCNNGG | 1 cut(s) | 277 |
| BssT1I | CCWWGG | 1 cut(s) | 277 |
| Bst4CI | ACNGT | 2 cut(s) | 54, 127 |
| BstBI | TTCGAA | 1 cut(s) | 236 |
| BstC8I | GCNNGC | 1 cut(s) | 27 |
| BstF5I | GGATG | 2 cut(s) | 231, 247 |
| BstMAI | GTCTC | 1 cut(s) | 149 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 94 |
| BstSFI | CTRYAG | 1 cut(s) | 159 |
| BstV1I | GCAGC | 1 cut(s) | 191 |
| BtsCI | GGATG | 2 cut(s) | 231, 247 |
| Cac8I | GCNNGC | 1 cut(s) | 27 |
| Csp6I | GTAC | 2 cut(s) | 50, 68 |
| CviJI | RGCY | 5 cut(s) | 29, 97, 256, 273, 286 |
| CviKI_1 | RGCY | 5 cut(s) | 29, 97, 256, 273, 286 |
| CviQI | GTAC | 2 cut(s) | 50, 68 |
| DraI | TTTAAA | 1 cut(s) | 37 |
| Eco130I | CCWWGG | 1 cut(s) | 277 |
| Eco57I | CTGAAG | 1 cut(s) | 138 |
| EcoT14I | CCWWGG | 1 cut(s) | 277 |
| ErhI | CCWWGG | 1 cut(s) | 277 |
| FaiI | YATR | 6 cut(s) | 105, 196, 198, 206, 223, 261 |
| FaqI | GGGAC | 1 cut(s) | 281 |
| FauNDI | CATATG | 1 cut(s) | 196 |
| Fnu4HI | GCNGC | 1 cut(s) | 180 |
| FokI | GGATG | 2 cut(s) | 234, 238 |
| Fsp4HI | GCNGC | 1 cut(s) | 180 |
| FspBI | CTAG | 1 cut(s) | 301 |
| GluI | GCNGC | 1 cut(s) | 180 |
| HindIII | AAGCTT | 1 cut(s) | 27 |
| HinfI | GANTC | 2 cut(s) | 229, 297 |
| Hpy188III | TCNNGA | 1 cut(s) | 116 |
| HpyAV | CCTTC | 1 cut(s) | 232 |
| HpyCH4III | ACNGT | 2 cut(s) | 54, 127 |
| HpyCH4V | TGCA | 2 cut(s) | 103, 161 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 94 |
| LpnPI | CCDG | 3 cut(s) | 129, 131, 225 |
| Lsp1109I | GCAGC | 1 cut(s) | 191 |
| MaeI | CTAG | 1 cut(s) | 301 |
| MaeIII | GTNAC | 1 cut(s) | 121 |
| MboII | GAAGA | 1 cut(s) | 227 |
| MnlI | CCTC | 3 cut(s) | 108, 169, 267 |
| MseI | TTAA | 2 cut(s) | 36, 165 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 94 |
| NdeI | CATATG | 1 cut(s) | 196 |
| NspV | TTCGAA | 1 cut(s) | 236 |
| PfeI | GAWTC | 2 cut(s) | 229, 297 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 77 |
| PkrI | GCNGC | 1 cut(s) | 181 |
| PstI | CTGCAG | 1 cut(s) | 163 |
| RsaI | GTAC | 2 cut(s) | 51, 69 |
| RsaNI | GTAC | 2 cut(s) | 50, 68 |
| SaqAI | TTAA | 2 cut(s) | 36, 165 |
| SatI | GCNGC | 1 cut(s) | 180 |
| SetI | ASST | 3 cut(s) | 31, 243, 288 |
| SfcI | CTRYAG | 1 cut(s) | 159 |
| SfuI | TTCGAA | 1 cut(s) | 236 |
| SgeI | CNNG | 8 cut(s) | 38, 86, 128, 158, 195, 224, 278, 290 |
| SspI | AATATT | 1 cut(s) | 20 |
| SspMI | CTAG | 1 cut(s) | 301 |
| StyI | CCWWGG | 1 cut(s) | 277 |
| TaaI | ACNGT | 2 cut(s) | 54, 127 |
| TaqI | TCGA | 1 cut(s) | 236 |
| TatI | WGTACW | 1 cut(s) | 49 |
| TfiI | GAWTC | 2 cut(s) | 229, 297 |
| Tru1I | TTAA | 2 cut(s) | 36, 165 |
| Tru9I | TTAA | 2 cut(s) | 36, 165 |
| TseI | GCWGC | 1 cut(s) | 179 |
| TspDTI | ATGAA | 3 cut(s) | 221, 236, 242 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 77 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 219 |
| XspI | CTAG | 1 cut(s) | 301 |