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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom15g22820 |
| rosa_chinensis | RchiOBHm_Chr1g0322801 RchiOBHm_Chr2g0084191 |
| rosa_laevigata | RLG00000018984 |
| rosa_multiflora | Rmu_co8155004.1_g000001 Rmu_sc0004536.1_g000013 Rmu_sc0015713.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00014680 Rroxscaffold_1G00025700 Rroxscaffold_1G00075190 Rroxscaffold_2G00147870 Rroxscaffold_3G00241900 Rroxscaffold_4G00326200 Rroxscaffold_5G00350350 Rroxscaffold_5G00360930 Rroxscaffold_5G00374500 Rroxscaffold_6G00408450 Rroxscaffold_7G00156390 Rroxscaffold_7G00174570 Rroxscaffold_7G00176260 |
| rosa_wichuraiana | Rw5G041040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 3 cut(s) | 7, 163, 366 |
| AciI | CCGC | 4 cut(s) | 161, 163, 366, 451 |
| AclI | AACGTT | 1 cut(s) | 195 |
| AclWI | GGATC | 2 cut(s) | 37, 384 |
| AfaI | GTAC | 3 cut(s) | 128, 176, 308 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 162 |
| AflII | CTTAAG | 1 cut(s) | 227 |
| AjiI | CACGTC | 1 cut(s) | 371 |
| AluBI | AGCT | 1 cut(s) | 211 |
| AluI | AGCT | 1 cut(s) | 211 |
| Alw26I | GTCTC | 1 cut(s) | 194 |
| AlwI | GGATC | 2 cut(s) | 37, 384 |
| Ama87I | CYCGRG | 1 cut(s) | 279 |
| AspLEI | GCGC | 1 cut(s) | 531 |
| AsuHPI | GGTGA | 1 cut(s) | 347 |
| AvaI | CYCGRG | 1 cut(s) | 279 |
| BaeGI | GKGCMC | 1 cut(s) | 280 |
| BauI | CACGAG | 1 cut(s) | 558 |
| BccI | CCATC | 3 cut(s) | 102, 209, 332 |
| BcoDI | GTCTC | 1 cut(s) | 194 |
| BfaI | CTAG | 1 cut(s) | 50 |
| BfrI | CTTAAG | 1 cut(s) | 227 |
| BisI | GCNGC | 1 cut(s) | 164 |
| BlsI | GCNGC | 1 cut(s) | 165 |
| BmeT110I | CYCGRG | 1 cut(s) | 279 |
| BmgBI | CACGTC | 1 cut(s) | 371 |
| BmsI | GCATC | 4 cut(s) | 73, 103, 469, 540 |
| BsaJI | CCNNGG | 1 cut(s) | 161 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 249, 279, 397, 427 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 162 |
| BseDI | CCNNGG | 1 cut(s) | 161 |
| BseGI | GGATG | 3 cut(s) | 113, 390, 531 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 162 |
| BseRI | GAGGAG | 3 cut(s) | 26, 421, 424 |
| BseSI | GKGCMC | 1 cut(s) | 280 |
| Bsh1236I | CGCG | 3 cut(s) | 7, 163, 366 |
| BsiHKCI | CYCGRG | 1 cut(s) | 279 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 162 |
| BsmAI | GTCTC | 1 cut(s) | 194 |
| BsmI | GAATGC | 1 cut(s) | 243 |
| BsoBI | CYCGRG | 1 cut(s) | 279 |
| Bsp1286I | GDGCHC | 1 cut(s) | 280 |
| Bsp1407I | TGTACA | 1 cut(s) | 306 |
| Bsp143I | GATC | 3 cut(s) | 42, 376, 381 |
| BspACI | CCGC | 4 cut(s) | 161, 163, 366, 451 |
| BspFNI | CGCG | 3 cut(s) | 7, 163, 366 |
| BspPI | GGATC | 2 cut(s) | 37, 384 |
| BspTI | CTTAAG | 1 cut(s) | 227 |
| BsrGI | TGTACA | 1 cut(s) | 306 |
| BssECI | CCNNGG | 1 cut(s) | 161 |
| BssMI | GATC | 3 cut(s) | 42, 376, 381 |
| BssSI | CACGAG | 1 cut(s) | 558 |
| Bst2BI | CACGAG | 1 cut(s) | 558 |
| Bst4CI | ACNGT | 1 cut(s) | 457 |
| BstAFI | CTTAAG | 1 cut(s) | 227 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 249, 448 |
| BstAUI | TGTACA | 1 cut(s) | 306 |
| BstC8I | GCNNGC | 2 cut(s) | 83, 364 |
| BstDEI | CTNAG | 2 cut(s) | 134, 509 |
| BstDSI | CCRYGG | 1 cut(s) | 161 |
| BstF5I | GGATG | 3 cut(s) | 113, 390, 531 |
| BstFNI | CGCG | 3 cut(s) | 7, 163, 366 |
| BstHHI | GCGC | 1 cut(s) | 531 |
| BstKTI | GATC | 3 cut(s) | 45, 379, 384 |
| BstMAI | GTCTC | 1 cut(s) | 194 |
| BstMBI | GATC | 3 cut(s) | 42, 376, 381 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 91, 169, 249, 258, 448, 457 |
| BstNSI | RCATGY | 1 cut(s) | 89 |
| BstSLI | GKGCMC | 1 cut(s) | 280 |
| BstUI | CGCG | 3 cut(s) | 7, 163, 366 |
| BstX2I | RGATCY | 2 cut(s) | 42, 376 |
| BstYI | RGATCY | 2 cut(s) | 42, 376 |
| BtgI | CCRYGG | 1 cut(s) | 161 |
| BtrI | CACGTC | 1 cut(s) | 371 |
| BtsCI | GGATG | 3 cut(s) | 113, 390, 531 |
| Cac8I | GCNNGC | 2 cut(s) | 83, 364 |
| CfoI | GCGC | 1 cut(s) | 531 |
| Cfr42I | CCGCGG | 1 cut(s) | 164 |
| CseI | GACGC | 1 cut(s) | 13 |
| Csp6I | GTAC | 3 cut(s) | 127, 175, 307 |
| CviAII | CATG | 5 cut(s) | 86, 114, 186, 395, 424 |
| CviQI | GTAC | 3 cut(s) | 127, 175, 307 |
| DdeI | CTNAG | 2 cut(s) | 134, 509 |
| DpnI | GATC | 3 cut(s) | 44, 378, 383 |
| DpnII | GATC | 3 cut(s) | 42, 376, 381 |
| Eco88I | CYCGRG | 1 cut(s) | 279 |
| FaeI | CATG | 5 cut(s) | 89, 117, 189, 398, 427 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 421, 453 |
| FatI | CATG | 5 cut(s) | 85, 113, 185, 394, 423 |
| Fnu4HI | GCNGC | 1 cut(s) | 164 |
| FokI | GGATG | 3 cut(s) | 120, 377, 518 |
| Fsp4HI | GCNGC | 1 cut(s) | 164 |
| FspBI | CTAG | 1 cut(s) | 50 |
| GlaI | GCGC | 1 cut(s) | 530 |
| GluI | GCNGC | 1 cut(s) | 164 |
| HgaI | GACGC | 1 cut(s) | 13 |
| HhaI | GCGC | 1 cut(s) | 531 |
| Hin1II | CATG | 5 cut(s) | 89, 117, 189, 398, 427 |
| Hin6I | GCGC | 1 cut(s) | 529 |
| HinP1I | GCGC | 1 cut(s) | 529 |
| HphI | GGTGA | 1 cut(s) | 347 |
| Hpy166II | GTNNAC | 1 cut(s) | 352 |
| Hpy188I | TCNGA | 2 cut(s) | 69, 381 |
| Hpy188III | TCNNGA | 2 cut(s) | 50, 98 |
| Hpy8I | GTNNAC | 1 cut(s) | 352 |
| HpyAV | CCTTC | 1 cut(s) | 322 |
| HpyCH4III | ACNGT | 1 cut(s) | 457 |
| HpyCH4IV | ACGT | 2 cut(s) | 195, 370 |
| HpyCH4V | TGCA | 5 cut(s) | 64, 172, 316, 423, 460 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 91, 169, 249, 258, 448, 457 |
| HpyF3I | CTNAG | 2 cut(s) | 134, 509 |
| HpySE526I | ACGT | 2 cut(s) | 195, 370 |
| Hsp92II | CATG | 5 cut(s) | 89, 117, 189, 398, 427 |
| HspAI | GCGC | 1 cut(s) | 529 |
| KspI | CCGCGG | 1 cut(s) | 164 |
| Kzo9I | GATC | 3 cut(s) | 42, 376, 381 |
| LmnI | GCTCC | 1 cut(s) | 493 |
| LpnPI | CCDG | 3 cut(s) | 283, 318, 494 |
| LweI | GCATC | 4 cut(s) | 73, 103, 469, 540 |
| MaeI | CTAG | 1 cut(s) | 50 |
| MaeII | ACGT | 2 cut(s) | 195, 370 |
| MaeIII | GTNAC | 1 cut(s) | 265 |
| MalI | GATC | 3 cut(s) | 44, 378, 383 |
| MboI | GATC | 3 cut(s) | 42, 376, 381 |
| MfeI | CAATTG | 1 cut(s) | 167 |
| MflI | RGATCY | 2 cut(s) | 42, 376 |
| MhlI | GDGCHC | 1 cut(s) | 280 |
| MluCI | AATT | 2 cut(s) | 167, 298 |
| MseI | TTAA | 4 cut(s) | 228, 297, 357, 386 |
| MslI | CAYNNNNRTG | 1 cut(s) | 99 |
| MspA1I | CMGCKG | 1 cut(s) | 163 |
| MspCI | CTTAAG | 1 cut(s) | 227 |
| MunI | CAATTG | 1 cut(s) | 167 |
| Mva1269I | GAATGC | 1 cut(s) | 243 |
| MvnI | CGCG | 3 cut(s) | 7, 163, 366 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 91, 169, 249, 258, 448, 457 |
| NdeII | GATC | 3 cut(s) | 42, 376, 381 |
| NlaIII | CATG | 5 cut(s) | 89, 117, 189, 398, 427 |
| NspI | RCATGY | 1 cut(s) | 89 |
| PctI | GAATGC | 1 cut(s) | 243 |
| PkrI | GCNGC | 1 cut(s) | 165 |
| Psp1406I | AACGTT | 1 cut(s) | 195 |
| PsuI | RGATCY | 2 cut(s) | 42, 376 |
| RsaI | GTAC | 3 cut(s) | 128, 176, 308 |
| RsaNI | GTAC | 3 cut(s) | 127, 175, 307 |
| RseI | CAYNNNNRTG | 1 cut(s) | 99 |
| SacII | CCGCGG | 1 cut(s) | 164 |
| SaqAI | TTAA | 4 cut(s) | 228, 297, 357, 386 |
| SatI | GCNGC | 1 cut(s) | 164 |
| Sau3AI | GATC | 3 cut(s) | 42, 376, 381 |
| SduI | GDGCHC | 1 cut(s) | 280 |
| SetI | ASST | 5 cut(s) | 140, 180, 198, 213, 373 |
| SfaNI | GCATC | 4 cut(s) | 73, 103, 469, 540 |
| Sfr303I | CCGCGG | 1 cut(s) | 164 |
| SgrBI | CCGCGG | 1 cut(s) | 164 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 99 |
| SmlI | CTYRAG | 1 cut(s) | 227 |
| SmoI | CTYRAG | 1 cut(s) | 227 |
| Sse9I | AATT | 2 cut(s) | 167, 298 |
| SsiI | CCGC | 4 cut(s) | 161, 163, 366, 451 |
| SspMI | CTAG | 1 cut(s) | 50 |
| TaaI | ACNGT | 1 cut(s) | 457 |
| TaiI | ACGT | 2 cut(s) | 198, 373 |
| TaqII | GACCGA | 1 cut(s) | 194 |
| TasI | AATT | 2 cut(s) | 167, 298 |
| TatI | WGTACW | 1 cut(s) | 306 |
| TauI | GCSGC | 1 cut(s) | 166 |
| Tru1I | TTAA | 4 cut(s) | 228, 297, 357, 386 |
| Tru9I | TTAA | 4 cut(s) | 228, 297, 357, 386 |
| Vha464I | CTTAAG | 1 cut(s) | 227 |
| XbaI | TCTAGA | 1 cut(s) | 49 |
| XceI | RCATGY | 1 cut(s) | 89 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 137 |
| XspI | CTAG | 1 cut(s) | 50 |