RchiOBHm_Chr3g0468851

Interactor of constitutive active ROPs

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
14726890 .. 14737825
10936 bp
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UTR
Exon/CDS
Intron
PRQ43471

Sequence Viewer

Length: 1845 bp
ATGCAGACTCCAAAAGCAAAAAGTGGCTCTTTGGAAGTGCCTCAAAGAAAATCTCCAGCAACACCTAAAACTGCCAAGACATCTGGATCAAATCCTGATTCAGTATCCTCTCCGAATATGGCAACTAGGACCCCAAAAGGAAGTCCAAAAGTCACTGAACGCAGGTCGCCACGAAGTCCAGTATCCGAGAGGAAGCTGCCAAAAAGAGTGTCAGAATTGGAATCACAACTTTCTCAGTTGCAAGAGGATCTGAAGAGGGCAAAGGACCAGTTAAACTCATCTGAGTCAGCGAAGAGGCGATGCCAGAAGGAGGCTGAAGAAGCCAAGAACCAGCTATTAGCAATGTCTGCAAAGCTTGAAGAGTCTGAACAGCAACTGCAGGAAATTTCTTCTTCTGAAGATGCTCGTATTCAAGAGCTCCGTCAACTTTCTCAGGATCGAGATAGAGCATGGGAATCTGAACTTCAGGCTGTTCAACAGCAGCGTTCGATGGATTCCACTGCCTTGGCTTCTGCCATTAATGAAATTCAGAAGCTAAAGGGTCAGGTGGAAATGGTGGCGGACTCTGAAGCCACCCAGAGGAGGCATGCAGAGTCAGCAGACGCTGAGATCCAGACCTTGAGAATGGAACTTTCTGAAACTCTCTCCCTGGTTGAGAAATTGAAAACTGAGCTAAGTGATTGCAAAGAATCTGAAGCCAGGGCCGTAGAACTTATAGACAGTACTCGTATGCAATTGGAGAGGGCAAATGCAACCATAGAATCGCTCCAATTGGATAGGACCAAAGGGTCAGAGTACTGCAACACTTTATCATTGGAGTTGGAGCAGTCTAAAGATCGCATTAAATCACTGGAGAGTCTTGTGAGCAAACTACAGGCAGAAGTTGCTATTAGTAACAGCAATCAATTGGTAAACTCTTCAGGCAATATTTCAAAACTTTCTCAGGGAGATGACCAAACTGAAGAAACAGTACAGTTAAAAGAAGAGCTGAATTGTTTGAAATATGAAGCGAGTCAATTGAGGTCTGCATTAGAAGCGGCTGAGATGAGGTACCAAGAAGAATATATTCAGAGCACGCTGCAGATTAGAAGTGCATATGATGAAGTTGAATCTACAAAATCTGAATCATGTCAGAGGGAAGCTGAATTGGCATCAGAACTGAAGCAAGCAAGGGCTCATGTTGAAGACTTGAGCACTCAGCTGATGGATAAAGAAAATCAATTGCAGAGTATATCGGAGGAAAATGACAGGTTGAGCTTGCAAATTGAGAAAAATCTATCAAGTGAAGGGGAATCTGAACTTGCAACGGAGCTGAAGAAGTCGGAAACCGCAGTGGTAGAGTTGAAGGCCAGTTTGATGGATAAGGAGACAGAATTGCAGAACATCGCTGAGGAAAATGAAATGCTGAAGATTGAACTTAAAAACAAGGAAATGGAGAGGAACAATGTCAATGACGACGCTGTTGTTTCAGCTGAAGGGGAGGCAGAGCGAGAGGCTGTAATAAAGGTTGGCCATTTAACTGAAGAAGCTGATAAAAGTACACAGAGAGCAGCACGAGCGACTGAGCAGCTGGATGCAGCACAGGCTGCAAATTCTGAATTGGAGGCTGAGTTAAGGAGGTTAAAGGTGCAGTCAGATCAGTGGAGGAAGGCCGCTGAGGCGGCTGCTGCTATTCTTTCAACAGGAAACAACGGGAAGTTTGTGGAGAGAACAGGTTCTCTTGAAAGCCACTACAATCCCCTGAGTTCACCTTATTCAGAAGACTTGGACGATGACTCGCCAAAGAAGAAAAATGTGACCATGTTGAAGAAGATTGGTGTTCTATGGAAGAAGGGCCAAAAGTAG

Protein Analysis

614

Amino Acids

68.61

Weight (kDa)

4.98

Isoelectric Point (pI)

60.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 787
Acc36I ACCTGC 1 cut(s) 153
Acc65I GGTACC 1 cut(s) 1050
AccB1I GGYRCC 1 cut(s) 1050
AciI CCGC 5 cut(s) 560, 1037, 1329, 1653, 1661
AclWI GGATC 4 cut(s) 94, 255, 444, 604
AcoI YGGCCR 1 cut(s) 1510
AcsI RAATTY 3 cut(s) 384, 525, 1591
AfaI GTAC 5 cut(s) 724, 797, 972, 1052, 1540
AfiI CCNNNNNNNGG 3 cut(s) 310, 579, 582
AjnI CCWGG 2 cut(s) 648, 698
Alw21I GWGCWC 3 cut(s) 420, 1076, 1196
Alw26I GTCTC 1 cut(s) 1361
AlwI GGATC 4 cut(s) 94, 255, 444, 604
AlwNI CAGNNNCTG 2 cut(s) 376, 605
AoxI GGCC 5 cut(s) 702, 1347, 1510, 1650, 1834
ApeKI GCWGC 9 cut(s) 196, 481, 1078, 1550, 1567, 1577, 1586, 1664, 1667
ApoI RAATTY 3 cut(s) 384, 525, 1591
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AseI ATTAAT 1 cut(s) 519
Asp700I GAANNNNTTC 2 cut(s) 1065, 1714
Asp718I GGTACC 1 cut(s) 1050
AspS9I GGNCC 5 cut(s) 129, 265, 702, 780, 1834
AsuHPI GGTGA 1 cut(s) 1740
AvaII GGWCC 3 cut(s) 129, 265, 780
BalI TGGCCA 1 cut(s) 1512
BanI GGYRCC 1 cut(s) 1050
BanII GRGCYC 2 cut(s) 420, 1177
BarI GAAGNNNNNNTAC 2 cut(s) 954, 986
BauI CACGAG 1 cut(s) 1554
BbsI GAAGAC 2 cut(s) 1191, 1767
Bbv12I GWGCWC 3 cut(s) 420, 1076, 1196
BbvCI CCTCAGC 2 cut(s) 1389, 1656
BbvI GCAGC 9 cut(s) 183, 493, 1065, 1562, 1573, 1579, 1589, 1651, 1654
BccI CCATC 3 cut(s) 484, 1198, 1351
BceAI ACGGC 1 cut(s) 689
BciT130I CCWGG 2 cut(s) 650, 700
BciVI GTATCC 2 cut(s) 115, 193
BcoDI GTCTC 1 cut(s) 1361
BfaI CTAG 1 cut(s) 126
BfmI CTRYAG 3 cut(s) 377, 872, 1079
BfuAI ACCTGC 1 cut(s) 153
BfuI GTATCC 2 cut(s) 115, 193
BglI GCCNNNNNGGC 1 cut(s) 1658
BmcAI AGTACT 2 cut(s) 724, 797
Bme1390I CCNGG 2 cut(s) 650, 700
Bme18I GGWCC 3 cut(s) 129, 265, 780
BmgT120I GGNCC 5 cut(s) 129, 265, 702, 780, 1834
BmiI GGNNCC 2 cut(s) 131, 1052
BmrFI CCNGG 2 cut(s) 650, 700
BmsI GCATC 4 cut(s) 290, 391, 1160, 1564
BpiI GAAGAC 2 cut(s) 1191, 1767
BpmI CTGGAG 2 cut(s) 39, 872
Bpu10I CCTNAGC 2 cut(s) 1389, 1656
BpuEI CTTGAG 2 cut(s) 640, 1210
BsaJI CCNNGG 3 cut(s) 504, 648, 699
BsaXI ACNNNNNCTCC 2 cut(s) 1595, 1625
Bsc4I CCNNNNNNNGG 3 cut(s) 310, 579, 582
Bse1I ACTGG 4 cut(s) 179, 268, 855, 1350
Bse3DI GCAATG 1 cut(s) 348
BseBI CCWGG 2 cut(s) 650, 700
BseDI CCNNGG 3 cut(s) 504, 648, 699
BseGI GGATG 1 cut(s) 1579
BseLI CCNNNNNNNGG 3 cut(s) 310, 579, 582
BseMI GCAATG 1 cut(s) 348
BseNI ACTGG 4 cut(s) 179, 268, 855, 1350
BseRI GAGGAG 1 cut(s) 595
BseXI GCAGC 9 cut(s) 183, 493, 1065, 1562, 1573, 1579, 1589, 1651, 1654
BsgI GTGCAG 1 cut(s) 1649
BshFI GGCC 5 cut(s) 704, 1349, 1512, 1652, 1836
BshNI GGYRCC 1 cut(s) 1050
BsiHKAI GWGCWC 3 cut(s) 420, 1076, 1196
BslI CCNNNNNNNGG 3 cut(s) 310, 579, 582
BsmAI GTCTC 1 cut(s) 1361
BsnI GGCC 5 cut(s) 704, 1349, 1512, 1652, 1836
Bsp1286I GDGCHC 4 cut(s) 420, 1076, 1177, 1196
Bsp143I GATC 6 cut(s) 86, 247, 436, 609, 835, 1636
BspACI CCGC 5 cut(s) 560, 1037, 1329, 1653, 1661
BspANI GGCC 5 cut(s) 704, 1349, 1512, 1652, 1836
BspLI GGNNCC 2 cut(s) 131, 1052
BspMAI CTGCAG 2 cut(s) 381, 1083
BspMI ACCTGC 1 cut(s) 153
BspPI GGATC 4 cut(s) 94, 255, 444, 604
BspQI GCTCTTC 1 cut(s) 978
BspT107I GGYRCC 1 cut(s) 1050
BsrDI GCAATG 1 cut(s) 348
BsrI ACTGG 4 cut(s) 179, 268, 855, 1350
BssECI CCNNGG 3 cut(s) 504, 648, 699
BssMI GATC 6 cut(s) 86, 247, 436, 609, 835, 1636
BssSI CACGAG 1 cut(s) 1554
BssT1I CCWWGG 1 cut(s) 504
Bst2BI CACGAG 1 cut(s) 1554
Bst2UI CCWGG 2 cut(s) 650, 700
Bst4CI ACNGT 3 cut(s) 722, 970, 975
Bst6I CTCTTC 5 cut(s) 248, 287, 354, 922, 978
BstAPI GCANNNNNTGC 3 cut(s) 347, 884, 1586
BstC8I GCNNGC 4 cut(s) 588, 1076, 1167, 1259
BstF5I GGATG 1 cut(s) 1579
BstKTI GATC 6 cut(s) 89, 250, 439, 612, 838, 1639
BstMAI GTCTC 1 cut(s) 1361
BstMBI GATC 6 cut(s) 86, 247, 436, 609, 835, 1636
BstNI CCWGG 2 cut(s) 650, 700
BstNSI RCATGY 1 cut(s) 590
BstSCI CCNGG 2 cut(s) 648, 698
BstSFI CTRYAG 3 cut(s) 377, 872, 1079
BstV1I GCAGC 9 cut(s) 183, 493, 1065, 1562, 1573, 1579, 1589, 1651, 1654
BstV2I GAAGAC 2 cut(s) 1191, 1767
BstX2I RGATCY 2 cut(s) 247, 609
BstXI CCANNNNNNTGG 2 cut(s) 505, 1357
BstYI RGATCY 2 cut(s) 247, 609
BsuI GTATCC 2 cut(s) 115, 193
BsuRI GGCC 5 cut(s) 704, 1349, 1512, 1652, 1836
BtgZI GCGATG 2 cut(s) 313, 1369
BtsCI GGATG 1 cut(s) 1579
BtsI GCAGTG 2 cut(s) 498, 1338
BtsIMutI CAGTG 5 cut(s) 153, 498, 848, 1338, 1646
BveI ACCTGC 1 cut(s) 153
Cac8I GCNNGC 4 cut(s) 588, 1076, 1167, 1259
CaiI CAGNNNCTG 2 cut(s) 376, 605
Cfr13I GGNCC 5 cut(s) 129, 265, 702, 780, 1834
CseI GACGC 2 cut(s) 611, 1466
Csp6I GTAC 5 cut(s) 723, 796, 971, 1051, 1539
CviAII CATG 5 cut(s) 450, 587, 1128, 1178, 1801
CviQI GTAC 5 cut(s) 723, 796, 971, 1051, 1539
DpnI GATC 6 cut(s) 88, 249, 438, 611, 837, 1638
DpnII GATC 6 cut(s) 86, 247, 436, 609, 835, 1636
DrdI GACNNNNNNGTC 1 cut(s) 787
DseDI GACNNNNNNGTC 1 cut(s) 787
EaeI YGGCCR 1 cut(s) 1510
Eam1104I CTCTTC 5 cut(s) 248, 287, 354, 922, 978
EarI CTCTTC 5 cut(s) 248, 287, 354, 922, 978
EciI GGCGGA 1 cut(s) 575
Ecl136II GAGCTC 1 cut(s) 418
Eco130I CCWWGG 1 cut(s) 504
Eco24I GRGCYC 2 cut(s) 420, 1177
Eco47I GGWCC 3 cut(s) 129, 265, 780
Eco53kI GAGCTC 1 cut(s) 418
EcoICRI GAGCTC 1 cut(s) 418
EcoO109I RGGNCCY 1 cut(s) 129
EcoRII CCWGG 2 cut(s) 648, 698
EcoT14I CCWWGG 1 cut(s) 504
EcoT38I GRGCYC 2 cut(s) 420, 1177
ErhI CCWWGG 1 cut(s) 504
FaeI CATG 5 cut(s) 453, 590, 1131, 1181, 1804
FalI AAGNNNNNCTT 2 cut(s) 13, 45
FatI CATG 5 cut(s) 449, 586, 1127, 1177, 1800
FauNDI CATATG 1 cut(s) 1096
FokI GGATG 1 cut(s) 1586
FriOI GRGCYC 2 cut(s) 420, 1177
FspBI CTAG 1 cut(s) 126
GsuI CTGGAG 2 cut(s) 39, 872
HaeIII GGCC 5 cut(s) 704, 1349, 1512, 1652, 1836
HgaI GACGC 2 cut(s) 611, 1466
Hin1II CATG 5 cut(s) 453, 590, 1131, 1181, 1804
HincII GTYRAC 1 cut(s) 425
HindII GTYRAC 1 cut(s) 425
HindIII AAGCTT 1 cut(s) 353
HphI GGTGA 1 cut(s) 1740
Hpy166II GTNNAC 4 cut(s) 425, 913, 1541, 1748
Hpy188III TCNNGA 7 cut(s) 84, 95, 413, 434, 440, 613, 1721
Hpy8I GTNNAC 4 cut(s) 425, 913, 1541, 1748
Hpy99I CGWCG 1 cut(s) 1460
HpyAV CCTTC 6 cut(s) 301, 1280, 1339, 1469, 1642, 1825
HpyCH4III ACNGT 3 cut(s) 722, 970, 975
Hsp92II CATG 5 cut(s) 453, 590, 1131, 1181, 1804
KpnI GGTACC 1 cut(s) 1054
Kzo9I GATC 6 cut(s) 86, 247, 436, 609, 835, 1636
LguI GCTCTTC 1 cut(s) 978
LmnI GCTCC 4 cut(s) 423, 771, 823, 1309
Lsp1109I GCAGC 9 cut(s) 183, 493, 1065, 1562, 1573, 1579, 1589, 1651, 1654
LweI GCATC 4 cut(s) 290, 391, 1160, 1564
MaeI CTAG 1 cut(s) 126
MaeIII GTNAC 3 cut(s) 151, 893, 1795
MalI GATC 6 cut(s) 88, 249, 438, 611, 837, 1638
MboI GATC 6 cut(s) 86, 247, 436, 609, 835, 1636
MfeI CAATTG 5 cut(s) 734, 770, 905, 1016, 1220
MflI RGATCY 2 cut(s) 247, 609
MhlI GDGCHC 4 cut(s) 420, 1076, 1177, 1196
MlsI TGGCCA 1 cut(s) 1512
MluNI TGGCCA 1 cut(s) 1512
MlyI GAGTC 7 cut(s) 293, 371, 557, 602, 865, 1021, 1769
MmeI TCCRAC 2 cut(s) 801, 1302
Mox20I TGGCCA 1 cut(s) 1512
MroXI GAANNNNTTC 2 cut(s) 1065, 1714
MscI TGGCCA 1 cut(s) 1512
MseI TTAA 8 cut(s) 272, 519, 843, 977, 1419, 1517, 1613, 1622
Msp20I TGGCCA 1 cut(s) 1512
MspA1I CMGCKG 4 cut(s) 1201, 1472, 1570, 1655
MspR9I CCNGG 2 cut(s) 650, 700
MunI CAATTG 5 cut(s) 734, 770, 905, 1016, 1220
MvaI CCWGG 2 cut(s) 650, 700
NdeI CATATG 1 cut(s) 1096
NdeII GATC 6 cut(s) 86, 247, 436, 609, 835, 1636
NlaIII CATG 5 cut(s) 453, 590, 1131, 1181, 1804
NlaIV GGNNCC 2 cut(s) 131, 1052
NmuCI GTSAC 2 cut(s) 151, 1795
NspI RCATGY 1 cut(s) 590
PaeI GCATGC 1 cut(s) 590
PciSI GCTCTTC 1 cut(s) 978
PdmI GAANNNNTTC 2 cut(s) 1065, 1714
PfeI GAWTC 9 cut(s) 98, 221, 455, 494, 689, 761, 1109, 1124, 1292
PleI GAGTC 7 cut(s) 292, 370, 557, 601, 864, 1020, 1769
PpsI GAGTC 7 cut(s) 292, 370, 557, 601, 864, 1020, 1769
PpuMI RGGWCCY 1 cut(s) 129
PshBI ATTAAT 1 cut(s) 519
Psp124BI GAGCTC 1 cut(s) 420
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 2 cut(s) 648, 698
PspGI CCWGG 2 cut(s) 648, 698
PspN4I GGNNCC 2 cut(s) 131, 1052
PspPI GGNCC 5 cut(s) 129, 265, 702, 780, 1834
PspPPI RGGWCCY 1 cut(s) 129
PstI CTGCAG 2 cut(s) 381, 1083
PstNI CAGNNNCTG 2 cut(s) 376, 605
PsuI RGATCY 2 cut(s) 247, 609
PvuII CAGCTG 3 cut(s) 1201, 1472, 1570
RsaI GTAC 5 cut(s) 724, 797, 972, 1052, 1540
RsaNI GTAC 5 cut(s) 723, 796, 971, 1051, 1539
SacI GAGCTC 1 cut(s) 420
SapI GCTCTTC 1 cut(s) 978
SaqAI TTAA 8 cut(s) 272, 519, 843, 977, 1419, 1517, 1613, 1622
Sau3AI GATC 6 cut(s) 86, 247, 436, 609, 835, 1636
Sau96I GGNCC 5 cut(s) 129, 265, 702, 780, 1834
ScaI AGTACT 2 cut(s) 724, 797
SchI GAGTC 7 cut(s) 293, 371, 557, 602, 865, 1021, 1769
ScrFI CCNGG 2 cut(s) 650, 700
SduI GDGCHC 4 cut(s) 420, 1076, 1177, 1196
SfaNI GCATC 4 cut(s) 290, 391, 1160, 1564
SfcI CTRYAG 3 cut(s) 377, 872, 1079
SinI GGWCC 3 cut(s) 129, 265, 780
SmlI CTYRAG 2 cut(s) 619, 1189
SmoI CTYRAG 2 cut(s) 619, 1189
SphI GCATGC 1 cut(s) 590
SsiI CCGC 5 cut(s) 560, 1037, 1329, 1653, 1661
SspI AATATT 1 cut(s) 928
SspMI CTAG 1 cut(s) 126
SstI GAGCTC 1 cut(s) 420
StyD4I CCNGG 2 cut(s) 648, 698
StyI CCWWGG 1 cut(s) 504
TaaI ACNGT 3 cut(s) 722, 970, 975
TaqI TCGA 2 cut(s) 439, 488
TatI WGTACW 4 cut(s) 722, 795, 970, 1538
TauI GCSGC 3 cut(s) 1040, 1655, 1664
TfiI GAWTC 9 cut(s) 98, 221, 455, 494, 689, 761, 1109, 1124, 1292
Tru1I TTAA 8 cut(s) 272, 519, 843, 977, 1419, 1517, 1613, 1622
Tru9I TTAA 8 cut(s) 272, 519, 843, 977, 1419, 1517, 1613, 1622
TscAI CASTG 5 cut(s) 160, 505, 855, 1338, 1646
TseFI GTSAC 2 cut(s) 151, 1795
TseI GCWGC 9 cut(s) 196, 481, 1078, 1550, 1567, 1577, 1586, 1664, 1667
Tsp45I GTSAC 2 cut(s) 151, 1795
TspDTI ATGAA 4 cut(s) 537, 1020, 1116, 1413
TspGWI ACGGA 2 cut(s) 410, 1322
TspRI CASTG 5 cut(s) 160, 505, 855, 1338, 1646
VpaK11BI GGWCC 3 cut(s) 129, 265, 780
VspI ATTAAT 1 cut(s) 519
XapI RAATTY 3 cut(s) 384, 525, 1591
XceI RCATGY 1 cut(s) 590
XmnI GAANNNNTTC 2 cut(s) 1065, 1714
XspI CTAG 1 cut(s) 126
ZrmI AGTACT 2 cut(s) 724, 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.