RLG00000024406

Interactor of constitutive active ROPs

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
35558013 .. 35562477
4465 bp
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UTR
Exon/CDS
Intron
RLM00000024406

Sequence Viewer

Length: 1851 bp
ATGCAGACTCCAAAAGCAAAAAGTGGCTCTTTGGAAGTGCCTCAAAGAAAATCTCCAGCAACACCTAAAACTGCCAAGACATCTGGATCAAATCCTGATTCAGTATCCTCTCCGAATATGGCAACTAGGACCCCAAAAGGAAGTCCAAAAGTCACTGAACGCAGGTCGCCACGAAGTCCAGTAGCCGAGAGGAAGCTGCCAAAAAGAGTGTCAGAATTGGAATCACAACTTTCTCAATTGCAAGAGGATCTGAAGAGGGCAAAGGACCAGCTAAACTCAGCTGAGTCAGCGAAGAGGCGATGCCAGAAGGAGGCTGAAGAAGCCAAAAACCAGCTATTAGCAATGTCCGCAAAGCTTGAAGAGACTGAACAGCAACTGCAGGAAATTTCTTCTTCTGAAGATGCTCGTATTCAAGAGCTCCGTCAACTTTCTCAGGATCGAGATAGAGCATGGGAATCTGAACTTCAGGCTGTTCAACAGCAGCGTTCGATGGATTCTACTGCCTTGGCTTCTGCCATTAATGAAATTCAGAAGCTAAAGGGTCAGGTGGAAATGGTGGCGGACTCTGAAGCCACCCAGAGGAGGCATGCAGAGTCAGCAGACGCTGAGATCCAGACCTTGAGAATGCAACTTTCTGAAACTCTCTCCCTGGTTGAGAAATTGAAAACTGAGCTAAGTGATTGCAAAGAATCTGAAGCCAGGGCCGTAGAACTTATAGACAGTACTCGCATACAATTGGAGAGGGCAAATGCAACCATAGAATCGCTCCAATTGGATAGGACCAAAGGGTCAGAGTACTGCAACTCTTTATCATTGGAGTTGGATCAGTCTAAAGATCGCATTAAATCACTGGAGAGTCTTGTGAGCAAACTACAGGCAGAAGTTGCTATTAGTAACAGCAATCAATTGGTAAACTCTTCGGGCAATTCAAAACTTTCTCAGGGAGATGACCAAAATGAAGAAACAGTACAGTTAAAAGAAGAGCTGAATTGTTTGAAATCTGAAGCGAGTCAATTGAGGTCTGCATTAGAAGCGGCTGAGATGAGGTACCAAGAAGAATATATTCAGAGCACGCTGCAGATTAGAAGTGCATATGATGAAGTTGAATCTACAAAATCTGAATCATGTCAGAGGGAAGCTGAATTGGCATCAGAACTGAAGCAAGCAAGGGCTCATGTTGAAGACTTGAGCACTCAGCTGATGGATAAAGAAAATCAATTGCAGAGTATATCGGAGGAAAATGACAGGTTGAGCTTGCAAATTGAGAAAAATCTATCAAGTGAAGGGGAATCTGAACTTGCCATGGAGCTGAAGAAGTCAGAAACCGCAGTGGTAGAGTTGAAGGCCAGTTTGATGGATAAGGAGACAGAATTTCAGAACATCGCTGAGGAAAATGAAATGCTGAAGATTGAACTTAAAAACAAGGAAATGGAGAGGAACAATGTCAATGACGACGCTGTTGTTTCAGCTGAATTAGCAACAGGGGAGGCAGAGCGAGAGGCTGTAATAAAGGTTGGCCATTTAACTGAAGAATCTGATAAAAGTACACAGAGAGCAGCACGAGTGACTGAGCAGCTGGATGCAGCACAGGCTGCAAATTCTGAATTGGAGGCTGAGTTAAGGAGGTTAAAGGTGCAGTCAGATCAGTGGAGGAAGGCCGCTGAGGCGGCTGCTGCTATTCTTTCAACAGGAAACAACGGGAAGTTTGTGGAGAGAACAGGTTCTCTTGAAAGCCACTACAATCCCTTGAGTTCACCTTATTCAGAAGACTTAGACGATGACTCGCCAAAGAAGAAAAATGTGACCATGTTGAAGAAGATTGGTGTTCTATGGAAGAAGGGCCAAAAGTAG

Protein Analysis

617

Amino Acids

68.76

Weight (kDa)

5.0

Isoelectric Point (pI)

57.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 787
Acc36I ACCTGC 1 cut(s) 153
Acc65I GGTACC 1 cut(s) 1047
AccB1I GGYRCC 1 cut(s) 1047
AciI CCGC 6 cut(s) 348, 560, 1034, 1326, 1659, 1667
AclWI GGATC 5 cut(s) 94, 255, 444, 604, 831
AcoI YGGCCR 1 cut(s) 1516
AcsI RAATTY 4 cut(s) 384, 525, 1370, 1597
AfaI GTAC 5 cut(s) 724, 797, 969, 1049, 1546
AfiI CCNNNNNNNGG 3 cut(s) 310, 579, 582
AjnI CCWGG 2 cut(s) 648, 698
Alw21I GWGCWC 3 cut(s) 420, 1073, 1193
Alw26I GTCTC 2 cut(s) 356, 1358
AlwI GGATC 5 cut(s) 94, 255, 444, 604, 831
AlwNI CAGNNNCTG 2 cut(s) 376, 605
AoxI GGCC 5 cut(s) 702, 1344, 1516, 1656, 1840
ApeKI GCWGC 9 cut(s) 196, 481, 1075, 1556, 1573, 1583, 1592, 1670, 1673
ApoI RAATTY 4 cut(s) 384, 525, 1370, 1597
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AseI ATTAAT 1 cut(s) 519
Asp700I GAANNNNTTC 2 cut(s) 1062, 1720
Asp718I GGTACC 1 cut(s) 1047
AspS9I GGNCC 5 cut(s) 129, 265, 702, 780, 1840
AsuHPI GGTGA 1 cut(s) 1746
AvaII GGWCC 3 cut(s) 129, 265, 780
BalI TGGCCA 1 cut(s) 1518
BanI GGYRCC 1 cut(s) 1047
BanII GRGCYC 2 cut(s) 420, 1174
BarI GAAGNNNNNNTAC 2 cut(s) 951, 983
BauI CACGAG 1 cut(s) 1560
BbsI GAAGAC 2 cut(s) 1188, 1773
Bbv12I GWGCWC 3 cut(s) 420, 1073, 1193
BbvCI CCTCAGC 2 cut(s) 1386, 1662
BbvI GCAGC 9 cut(s) 183, 493, 1062, 1568, 1579, 1585, 1595, 1657, 1660
BccI CCATC 3 cut(s) 484, 1195, 1348
BceAI ACGGC 1 cut(s) 689
BciT130I CCWGG 2 cut(s) 650, 700
BciVI GTATCC 1 cut(s) 115
BcoDI GTCTC 2 cut(s) 356, 1358
BfaI CTAG 1 cut(s) 126
BfmI CTRYAG 3 cut(s) 377, 872, 1076
BfuAI ACCTGC 1 cut(s) 153
BfuI GTATCC 1 cut(s) 115
BglI GCCNNNNNGGC 1 cut(s) 1664
BmcAI AGTACT 2 cut(s) 724, 797
Bme1390I CCNGG 2 cut(s) 650, 700
Bme18I GGWCC 3 cut(s) 129, 265, 780
BmgT120I GGNCC 5 cut(s) 129, 265, 702, 780, 1840
BmiI GGNNCC 2 cut(s) 131, 1049
BmrFI CCNGG 2 cut(s) 650, 700
BmsI GCATC 4 cut(s) 290, 391, 1157, 1570
BpiI GAAGAC 2 cut(s) 1188, 1773
BpmI CTGGAG 2 cut(s) 39, 872
Bpu10I CCTNAGC 2 cut(s) 1386, 1662
BpuEI CTTGAG 3 cut(s) 640, 1207, 1768
BsaJI CCNNGG 4 cut(s) 504, 648, 699, 1302
BsaXI ACNNNNNCTCC 2 cut(s) 1601, 1631
Bsc4I CCNNNNNNNGG 3 cut(s) 310, 579, 582
Bse1I ACTGG 3 cut(s) 179, 855, 1347
Bse3DI GCAATG 1 cut(s) 348
BseBI CCWGG 2 cut(s) 650, 700
BseDI CCNNGG 4 cut(s) 504, 648, 699, 1302
BseGI GGATG 1 cut(s) 1585
BseLI CCNNNNNNNGG 3 cut(s) 310, 579, 582
BseMI GCAATG 1 cut(s) 348
BseNI ACTGG 3 cut(s) 179, 855, 1347
BseRI GAGGAG 1 cut(s) 595
BseXI GCAGC 9 cut(s) 183, 493, 1062, 1568, 1579, 1585, 1595, 1657, 1660
BsgI GTGCAG 1 cut(s) 1655
BshFI GGCC 5 cut(s) 704, 1346, 1518, 1658, 1842
BshNI GGYRCC 1 cut(s) 1047
BsiHKAI GWGCWC 3 cut(s) 420, 1073, 1193
BslI CCNNNNNNNGG 3 cut(s) 310, 579, 582
BsmAI GTCTC 2 cut(s) 356, 1358
BsmI GAATGC 1 cut(s) 630
BsnI GGCC 5 cut(s) 704, 1346, 1518, 1658, 1842
Bsp1286I GDGCHC 4 cut(s) 420, 1073, 1174, 1193
Bsp143I GATC 7 cut(s) 86, 247, 436, 609, 823, 835, 1642
Bsp19I CCATGG 1 cut(s) 1302
BspACI CCGC 6 cut(s) 348, 560, 1034, 1326, 1659, 1667
BspANI GGCC 5 cut(s) 704, 1346, 1518, 1658, 1842
BspLI GGNNCC 2 cut(s) 131, 1049
BspMAI CTGCAG 2 cut(s) 381, 1080
BspMI ACCTGC 1 cut(s) 153
BspPI GGATC 5 cut(s) 94, 255, 444, 604, 831
BspQI GCTCTTC 1 cut(s) 975
BspT107I GGYRCC 1 cut(s) 1047
BsrDI GCAATG 1 cut(s) 348
BsrI ACTGG 3 cut(s) 179, 855, 1347
BssECI CCNNGG 4 cut(s) 504, 648, 699, 1302
BssMI GATC 7 cut(s) 86, 247, 436, 609, 823, 835, 1642
BssSI CACGAG 1 cut(s) 1560
BssT1I CCWWGG 2 cut(s) 504, 1302
Bst2BI CACGAG 1 cut(s) 1560
Bst2UI CCWGG 2 cut(s) 650, 700
Bst4CI ACNGT 3 cut(s) 722, 967, 972
Bst6I CTCTTC 5 cut(s) 248, 287, 354, 922, 975
BstAPI GCANNNNNTGC 2 cut(s) 884, 1592
BstC8I GCNNGC 4 cut(s) 588, 1073, 1164, 1256
BstDSI CCRYGG 1 cut(s) 1302
BstF5I GGATG 1 cut(s) 1585
BstKTI GATC 7 cut(s) 89, 250, 439, 612, 826, 838, 1645
BstMAI GTCTC 2 cut(s) 356, 1358
BstMBI GATC 7 cut(s) 86, 247, 436, 609, 823, 835, 1642
BstNI CCWGG 2 cut(s) 650, 700
BstNSI RCATGY 1 cut(s) 590
BstSCI CCNGG 2 cut(s) 648, 698
BstSFI CTRYAG 3 cut(s) 377, 872, 1076
BstV1I GCAGC 9 cut(s) 183, 493, 1062, 1568, 1579, 1585, 1595, 1657, 1660
BstV2I GAAGAC 2 cut(s) 1188, 1773
BstX2I RGATCY 2 cut(s) 247, 609
BstXI CCANNNNNNTGG 1 cut(s) 1354
BstYI RGATCY 2 cut(s) 247, 609
BsuI GTATCC 1 cut(s) 115
BsuRI GGCC 5 cut(s) 704, 1346, 1518, 1658, 1842
BtgI CCRYGG 1 cut(s) 1302
BtgZI GCGATG 2 cut(s) 313, 1366
BtsCI GGATG 1 cut(s) 1585
BtsI GCAGTG 1 cut(s) 1335
BtsIMutI CAGTG 4 cut(s) 153, 848, 1335, 1652
BveI ACCTGC 1 cut(s) 153
Cac8I GCNNGC 4 cut(s) 588, 1073, 1164, 1256
CaiI CAGNNNCTG 2 cut(s) 376, 605
Cfr13I GGNCC 5 cut(s) 129, 265, 702, 780, 1840
CseI GACGC 2 cut(s) 611, 1463
Csp6I GTAC 5 cut(s) 723, 796, 968, 1048, 1545
CviAII CATG 6 cut(s) 450, 587, 1125, 1175, 1303, 1807
CviQI GTAC 5 cut(s) 723, 796, 968, 1048, 1545
DpnI GATC 7 cut(s) 88, 249, 438, 611, 825, 837, 1644
DpnII GATC 7 cut(s) 86, 247, 436, 609, 823, 835, 1642
DrdI GACNNNNNNGTC 1 cut(s) 787
DseDI GACNNNNNNGTC 1 cut(s) 787
EaeI YGGCCR 1 cut(s) 1516
Eam1104I CTCTTC 5 cut(s) 248, 287, 354, 922, 975
EarI CTCTTC 5 cut(s) 248, 287, 354, 922, 975
EciI GGCGGA 1 cut(s) 575
Ecl136II GAGCTC 1 cut(s) 418
Eco130I CCWWGG 2 cut(s) 504, 1302
Eco24I GRGCYC 2 cut(s) 420, 1174
Eco47I GGWCC 3 cut(s) 129, 265, 780
Eco53kI GAGCTC 1 cut(s) 418
EcoICRI GAGCTC 1 cut(s) 418
EcoO109I RGGNCCY 1 cut(s) 129
EcoRII CCWGG 2 cut(s) 648, 698
EcoT14I CCWWGG 2 cut(s) 504, 1302
EcoT38I GRGCYC 2 cut(s) 420, 1174
ErhI CCWWGG 2 cut(s) 504, 1302
FaeI CATG 6 cut(s) 453, 590, 1128, 1178, 1306, 1810
FalI AAGNNNNNCTT 2 cut(s) 13, 45
FatI CATG 6 cut(s) 449, 586, 1124, 1174, 1302, 1806
FauNDI CATATG 1 cut(s) 1093
FokI GGATG 1 cut(s) 1592
FriOI GRGCYC 2 cut(s) 420, 1174
FspBI CTAG 1 cut(s) 126
GsuI CTGGAG 2 cut(s) 39, 872
HaeIII GGCC 5 cut(s) 704, 1346, 1518, 1658, 1842
HgaI GACGC 2 cut(s) 611, 1463
Hin1II CATG 6 cut(s) 453, 590, 1128, 1178, 1306, 1810
HincII GTYRAC 1 cut(s) 425
HindII GTYRAC 1 cut(s) 425
HindIII AAGCTT 1 cut(s) 353
HphI GGTGA 1 cut(s) 1746
Hpy166II GTNNAC 4 cut(s) 425, 913, 1547, 1754
Hpy188III TCNNGA 7 cut(s) 84, 95, 413, 434, 440, 613, 1727
Hpy8I GTNNAC 4 cut(s) 425, 913, 1547, 1754
Hpy99I CGWCG 1 cut(s) 1457
HpyAV CCTTC 5 cut(s) 301, 1277, 1336, 1648, 1831
HpyCH4III ACNGT 3 cut(s) 722, 967, 972
Hsp92II CATG 6 cut(s) 453, 590, 1128, 1178, 1306, 1810
KpnI GGTACC 1 cut(s) 1051
Kzo9I GATC 7 cut(s) 86, 247, 436, 609, 823, 835, 1642
LguI GCTCTTC 1 cut(s) 975
LmnI GCTCC 3 cut(s) 423, 771, 1306
Lsp1109I GCAGC 9 cut(s) 183, 493, 1062, 1568, 1579, 1585, 1595, 1657, 1660
LweI GCATC 4 cut(s) 290, 391, 1157, 1570
MaeI CTAG 1 cut(s) 126
MaeIII GTNAC 4 cut(s) 151, 893, 1564, 1801
MalI GATC 7 cut(s) 88, 249, 438, 611, 825, 837, 1644
MboI GATC 7 cut(s) 86, 247, 436, 609, 823, 835, 1642
MfeI CAATTG 6 cut(s) 236, 734, 770, 905, 1013, 1217
MflI RGATCY 2 cut(s) 247, 609
MhlI GDGCHC 4 cut(s) 420, 1073, 1174, 1193
MlsI TGGCCA 1 cut(s) 1518
MluNI TGGCCA 1 cut(s) 1518
MlyI GAGTC 6 cut(s) 293, 557, 602, 865, 1018, 1775
MmeI TCCRAC 1 cut(s) 801
Mox20I TGGCCA 1 cut(s) 1518
MroXI GAANNNNTTC 2 cut(s) 1062, 1720
MscI TGGCCA 1 cut(s) 1518
MseI TTAA 7 cut(s) 519, 843, 974, 1416, 1523, 1619, 1628
Msp20I TGGCCA 1 cut(s) 1518
MspA1I CMGCKG 5 cut(s) 281, 1198, 1469, 1576, 1661
MspR9I CCNGG 2 cut(s) 650, 700
MunI CAATTG 6 cut(s) 236, 734, 770, 905, 1013, 1217
Mva1269I GAATGC 1 cut(s) 630
MvaI CCWGG 2 cut(s) 650, 700
NcoI CCATGG 1 cut(s) 1302
NdeI CATATG 1 cut(s) 1093
NdeII GATC 7 cut(s) 86, 247, 436, 609, 823, 835, 1642
NlaIII CATG 6 cut(s) 453, 590, 1128, 1178, 1306, 1810
NlaIV GGNNCC 2 cut(s) 131, 1049
NmeAIII GCCGAG 1 cut(s) 211
NmuCI GTSAC 3 cut(s) 151, 1564, 1801
NspI RCATGY 1 cut(s) 590
PaeI GCATGC 1 cut(s) 590
PciSI GCTCTTC 1 cut(s) 975
PctI GAATGC 1 cut(s) 630
PdmI GAANNNNTTC 2 cut(s) 1062, 1720
PleI GAGTC 6 cut(s) 292, 557, 601, 864, 1017, 1775
PpsI GAGTC 6 cut(s) 292, 557, 601, 864, 1017, 1775
PpuMI RGGWCCY 1 cut(s) 129
PshBI ATTAAT 1 cut(s) 519
Psp124BI GAGCTC 1 cut(s) 420
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 2 cut(s) 648, 698
PspGI CCWGG 2 cut(s) 648, 698
PspN4I GGNNCC 2 cut(s) 131, 1049
PspPI GGNCC 5 cut(s) 129, 265, 702, 780, 1840
PspPPI RGGWCCY 1 cut(s) 129
PstI CTGCAG 2 cut(s) 381, 1080
PstNI CAGNNNCTG 2 cut(s) 376, 605
PsuI RGATCY 2 cut(s) 247, 609
PvuII CAGCTG 4 cut(s) 281, 1198, 1469, 1576
RsaI GTAC 5 cut(s) 724, 797, 969, 1049, 1546
RsaNI GTAC 5 cut(s) 723, 796, 968, 1048, 1545
SacI GAGCTC 1 cut(s) 420
SapI GCTCTTC 1 cut(s) 975
SaqAI TTAA 7 cut(s) 519, 843, 974, 1416, 1523, 1619, 1628
Sau3AI GATC 7 cut(s) 86, 247, 436, 609, 823, 835, 1642
Sau96I GGNCC 5 cut(s) 129, 265, 702, 780, 1840
ScaI AGTACT 2 cut(s) 724, 797
SchI GAGTC 6 cut(s) 293, 557, 602, 865, 1018, 1775
ScrFI CCNGG 2 cut(s) 650, 700
SduI GDGCHC 4 cut(s) 420, 1073, 1174, 1193
SfaNI GCATC 4 cut(s) 290, 391, 1157, 1570
SfcI CTRYAG 3 cut(s) 377, 872, 1076
SinI GGWCC 3 cut(s) 129, 265, 780
SmlI CTYRAG 3 cut(s) 619, 1186, 1747
SmoI CTYRAG 3 cut(s) 619, 1186, 1747
SphI GCATGC 1 cut(s) 590
SsiI CCGC 6 cut(s) 348, 560, 1034, 1326, 1659, 1667
SspMI CTAG 1 cut(s) 126
SstI GAGCTC 1 cut(s) 420
StyD4I CCNGG 2 cut(s) 648, 698
StyI CCWWGG 2 cut(s) 504, 1302
TaaI ACNGT 3 cut(s) 722, 967, 972
TaqI TCGA 2 cut(s) 439, 488
TatI WGTACW 4 cut(s) 722, 795, 967, 1544
TauI GCSGC 3 cut(s) 1037, 1661, 1670
Tru1I TTAA 7 cut(s) 519, 843, 974, 1416, 1523, 1619, 1628
Tru9I TTAA 7 cut(s) 519, 843, 974, 1416, 1523, 1619, 1628
TscAI CASTG 4 cut(s) 160, 855, 1335, 1652
TseFI GTSAC 3 cut(s) 151, 1564, 1801
TseI GCWGC 9 cut(s) 196, 481, 1075, 1556, 1573, 1583, 1592, 1670, 1673
Tsp45I GTSAC 3 cut(s) 151, 1564, 1801
TspDTI ATGAA 4 cut(s) 537, 972, 1113, 1410
TspGWI ACGGA 1 cut(s) 410
TspRI CASTG 4 cut(s) 160, 855, 1335, 1652
VpaK11BI GGWCC 3 cut(s) 129, 265, 780
VspI ATTAAT 1 cut(s) 519
XapI RAATTY 4 cut(s) 384, 525, 1370, 1597
XceI RCATGY 1 cut(s) 590
XmnI GAANNNNTTC 2 cut(s) 1062, 1720
XspI CTAG 1 cut(s) 126
ZrmI AGTACT 2 cut(s) 724, 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.