Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001479

Physical Location & Seq

Genomic Coordinates Reverse (-)

7559272 .. 7561822

Gene Structure 2551 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0096900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGTTTGTCAAGCTTTCTGCTTTCCTAGTACTACTAGTACTTCTGGCACCCGCAGAAGCCCAAGACCTCAATTTCATCTACAATGATGGTTTCTCTGGCCGTTCTGGTCTTAATCTCAGTCTAGACGGCATAGCAGAGATCACACCAAAAGGTCTCTTGAAGCTTACAAAGCCCACCAAACAGAGTAGTGGTCATGCCTTCTACCCTAACCCAGTAACCTTCAAGAACTCAGAGAACGACTCCGCTTTCTCCTTCTCCACCAACTTTATCTTTGCCATCCAACCAGAGTACACTACTTCCGGCGGCGATGGAATGGCCTTTGTCATCGCTCCGACAAGAGGCCTCCCCGAAGCTCTGCCGATCCAGTACTTGGGCCTGTTCAACGTCTCCAACAATGGGAATTTAAACAATCATGTTTTTGCTGTGGAGCTTGACACGATCCAGAACCCGGAATTCAGTGACATCAATGAAAACCATGTTGGGATCGACATCAATGGCTTGCACTCTGTCAAAGCTGCTCCAGCTGGTTATTTTGATGGTCAGCTCAAGAACCTGACTCTTATCAGTGGTAAAGAAATGAGAGTTTGGGTTGAATATGATGGTACCAAGAAGCAAATTGAAGTTACTATGGCTCCAATTGCTGTTGCAACTAAATCCCCAACTCCACTTTTGTCTTTGAAATATGACCTTTCCCCAATTCTCAACAAAACCATGTATGTTGGCTTTTCCTCTTCAACTGGTCCGTTCCGCACATCGCATTATGTAGTGGGTTGGAGCTTTAGGATGAATGGCCAAGCTCAAGACCTTATAGCTTCCAAACTTCCCAAGTTGCCTAGCATTGCAGGTAAAAAGAGGTCCATGCTTTTCACCTTTGGTGTGCCTCTGATTTCAGTGGTTTTGCTAGTGGTTTCTGGGGTGCTTTATGTCATAAGAAGGAAGAGGAAGTTTGCAGAAGTGCTTGAAGATTGGGAGCTGGAGTATGGTCCTCAGAGGTTTAAGTACAAAGAATTGTATATAGCCACCAAAGGGTTTAGGGAAAAGGAGCTTTTGGGAACTGGGGGATTTGGTAAAGTTTATAGAGGTTTATTACCCTCCTCTAAAATTGAGATTGCAGTGAAGAGGGTATCACATGAATCAAGACAGGGGATGAAGGAATTTGTAGCAGAAATTGTTAGTATTGGCCGGCTTCGTCACCGGAATTTAGTACAACTGTTGGGATATTGCAGGCGAAAAGGGGAGCTGCTTTTGGTCTATGACTACATGCCTAATGGAAGCTTGGACAAATACCTCTTTGATCAACCTGAGGTGACCCTTAATTGGAGCCAGAGGTTTAAAGTCATCAAAGGTGTGGCTTCAGGGCTGCTCTATCTTCATGAAGAATGGGAACAAGTTGTGATTCATAGAGATGTGAAGGCCAGTAATGTGTTGCTAGATGGGGAATTCAATGGAAGGCTAGGAGATTTCGGGCTTGCAAGATTATACGACCATGGAACAGACCCTCAAACTACTCATATAGTTGGAACACTCGGGTACCTAGCCCCAGAGCACACAAGAACAGGTCGGGCCACCACGAGCACCGACGTGTTTGCTTTTGGGGCATTTTTGCTCGAAGTTGCTTGCGGAAAAAGGCCAATTAAGACACAGGGTCCAGAAGATATGATTTTGGTTGATTGGGTGTTTTCTTGTTGGAATAGAAGTAACATCCTTGAGGCAAGAGATCAGAGCTTTGGTACGGATTTTGTAGCCGAGGAAGTGGAGTTGGTGTTGAAGCTTGGGCTTTTGTGCTCTCATTCGAAGCCAGCGGCAAGGCCAAGCATGCGACAAGTCGTTCAGTACTTGGCTGGTGATGCTGCTTTGCCGGGGCTTTCTTCTAGTGGCTTAGCGGTTGGACACTCTGAAGGTTTTGATGACTATGCTATGTCGTATCAGTCTTCCTTAGGCAAGGGGTCCTCCCATTCATCATATGTTGCAGAGTCGGCACTACTTTCAGGTGGTCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005856 GO:0005874 GO:0006996 GO:0007010 GO:0007017 GO:0008150 GO:0009507 GO:0009536 GO:0009664 GO:0009987 GO:0015630 GO:0016043 GO:0030865 GO:0031122 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

ko04530 map04530

Pfam Domains

Protein Families

No domains found.

Protein Analysis

666

Amino Acids

73.45

Weight (kDa)

8.35

Isoelectric Point (pI)

38.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	23 - 275	3.5e-82	Legume lectin domain
Lectin_L-type_dom	PF18483	42 - 253	6.6e-11	Legume lectin beta-barrel domain
Pkinase	PF00069	344 - 611	3.4e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	347 - 613	1.5e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37080 AT2G37080 AT2G37080 AT3G53350 AT3G53350 AT3G53350 AT3G53350 AT3G53350 AT3G53350 AT3G53350 AT3G53350 AT3G53350
fragaria_vesca	FvH4_6g15372 FvH4_6g15372 FvH4_6g15372 FvH4_6g15372
malus_domestica	MD04G1104300.v1.1 MD12G1124200.v1.1
prunus_persica	Prupe.6G241200_v2.0.a1 Prupe.6G241200_v2.0.a1 Prupe.6G241200_v2.0.a1 Prupe.6G241200_v2.0.a1 Prupe.6G241200_v2.0.a1 Prupe.6G241200_v2.0.a1 Prupe.6G241200_v2.0.a1
pyrus_communis	pycom04g09910 pycom12g12260
rosa_chinensis	RchiOBHm_Chr2g0099711 RchiOBHm_Chr2g0125251 RchiOBHm_Chr3g0468851
rosa_laevigata	RLG00000024406
rosa_multiflora	Rmu_sc0001639.1_g000019
rosa_roxburghii	Rroxscaffold_4G00315970 Rroxscaffold_6G00412520
rosa_rugosa	Rorug03G0096800 Rorug03G0096900 Rorug06G0151400
rosa_samantha	Rh2BG246400 Rh2CG237000 Rh3AG146600 Rh3AG146700 Rh3BG169100 Rh3BG169200 Rh3DG205900 Rh4AG101700 Rh4CG109700 Rh4DG262400 Rh7BG297800 Rh7DG377800
rosa_wichuraiana	Rw2G026840 Rw3G013790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	833
Acc65I	GGTACC	2 cut(s)	602, 1530
AccB1I	GGYRCC	3 cut(s)	46, 602, 1530
AccB7I	CCANNNNNTGG	1 cut(s)	370
AciI	CCGC	7 cut(s)	51, 243, 303, 748, 1620, 1802, 1883
AclWI	GGATC	3 cut(s)	355, 433, 491
AcoI	YGGCCR	3 cut(s)	97, 790, 1180
AcsI	RAATTY	5 cut(s)	400, 452, 1154, 1198, 1439
AcuI	CTGAAG	2 cut(s)	1338, 1917
AfiI	CCNNNNNNNGG	6 cut(s)	338, 370, 396, 448, 1026, 1317
AflIII	ACRYGT	1 cut(s)	1581
AhdI	GACNNNNNGTC	1 cut(s)	1644
AhlI	ACTAGT	1 cut(s)	34
AjiI	CACGTC	1 cut(s)	1582
AjuI	GAANNNNNNNTTGG	2 cut(s)	462, 494
AleI	CACNNNNGTG	1 cut(s)	1580
Alw21I	GWGCWC	3 cut(s)	1548, 1577, 1787
Alw26I	GTCTC	2 cut(s)	158, 391
AlwI	GGATC	3 cut(s)	355, 433, 491
Ama87I	CYCGRG	1 cut(s)	1526
ApeKI	GCWGC	4 cut(s)	515, 1240, 1360, 1850
ApoI	RAATTY	5 cut(s)	400, 452, 1154, 1198, 1439
Asp718I	GGTACC	2 cut(s)	602, 1530
AspS9I	GGNCC	7 cut(s)	373, 740, 855, 983, 1563, 1646, 1947
AsuC2I	CCSGG	2 cut(s)	449, 1860
AsuHPI	GGTGA	4 cut(s)	859, 1184, 1318, 1856
AsuII	TTCGAA	1 cut(s)	1793
AvaI	CYCGRG	1 cut(s)	1526
AvaII	GGWCC	5 cut(s)	740, 855, 983, 1646, 1947
AxyI	CCTNAGG	2 cut(s)	1302, 1936
BaeI	ACNNNNGTAYC	2 cut(s)	1514, 1547
BalI	TGGCCA	1 cut(s)	792
BanI	GGYRCC	3 cut(s)	46, 602, 1530
BauI	CACGAG	1 cut(s)	1570
BbsI	GAAGAC	1 cut(s)	1923
Bbv12I	GWGCWC	3 cut(s)	1548, 1577, 1787
BbvI	GCAGC	4 cut(s)	502, 1227, 1347, 1837
BccI	CCATC	6 cut(s)	80, 284, 302, 530, 593, 1427
BceAI	ACGGC	2 cut(s)	84, 142
BcgI	CGANNNNNNTGC	2 cut(s)	1568, 1602
BclI	TGATCA	1 cut(s)	1294
BcnI	CCSGG	2 cut(s)	449, 1860
BcoDI	GTCTC	2 cut(s)	158, 391
BcuI	ACTAGT	1 cut(s)	34
BfaI	CTAG	9 cut(s)	26, 35, 122, 834, 902, 1430, 1454, 1535, 1872
BfuAI	ACCTGC	1 cut(s)	833
BisI	GCNGC	6 cut(s)	304, 516, 1241, 1361, 1803, 1851
BlpI	GCTNAGC	1 cut(s)	1879
BlsI	GCNGC	6 cut(s)	305, 517, 1242, 1362, 1804, 1852
BmcAI	AGTACT	4 cut(s)	30, 39, 368, 1835
Bme1390I	CCNGG	2 cut(s)	449, 1860
Bme18I	GGWCC	5 cut(s)	740, 855, 983, 1646, 1947
BmeRI	GACNNNNNGTC	1 cut(s)	1644
BmeT110I	CYCGRG	1 cut(s)	1526
BmgBI	CACGTC	1 cut(s)	1582
BmgT120I	GGNCC	7 cut(s)	373, 740, 855, 983, 1563, 1646, 1947
BmiI	GGNNCC	7 cut(s)	48, 604, 633, 1322, 1532, 1647, 1948
BmrFI	CCNGG	2 cut(s)	449, 1860
BmrI	ACTGGG	2 cut(s)	206, 1065
BmsI	GCATC	1 cut(s)	1837
BmuI	ACTGGG	2 cut(s)	206, 1065
BpiI	GAAGAC	1 cut(s)	1923
BplI	GAGNNNNNCTC	2 cut(s)	224, 256
BpmI	CTGGAG	2 cut(s)	504, 995
Bpu1102I	GCTNAGC	1 cut(s)	1879
Bpu14I	TTCGAA	1 cut(s)	1793
BpuEI	CTTGAG	3 cut(s)	530, 783, 1727
BpuMI	CCSGG	2 cut(s)	449, 1860
BsaBI	GATNNNNATC	1 cut(s)	488
BsaI	GGTCTC	1 cut(s)	158
BsaJI	CCNNGG	3 cut(s)	1486, 1746, 1859
BsaWI	WCCGGW	1 cut(s)	1194
BsaXI	ACNNNNNCTCC	6 cut(s)	616, 646, 962, 992, 1748, 1778
Bsc4I	CCNNNNNNNGG	6 cut(s)	338, 370, 396, 448, 1026, 1317
Bse118I	RCCGGY	1 cut(s)	1182
Bse1I	ACTGG	5 cut(s)	212, 364, 742, 1060, 1416
Bse21I	CCTNAGG	2 cut(s)	1302, 1936
Bse3DI	GCAATG	1 cut(s)	837
Bse8I	GATNNNNATC	1 cut(s)	488
BseDI	CCNNGG	3 cut(s)	1486, 1746, 1859
BseGI	GGATG	4 cut(s)	276, 789, 1152, 1701
BseJI	GATNNNNATC	1 cut(s)	488
BseLI	CCNNNNNNNGG	6 cut(s)	338, 370, 396, 448, 1026, 1317
BseMI	GCAATG	1 cut(s)	837
BseMII	CTCAG	4 cut(s)	130, 243, 1001, 1293
BseNI	ACTGG	5 cut(s)	212, 364, 742, 1060, 1416
BseRI	GAGGAG	1 cut(s)	1084
BseXI	GCAGC	4 cut(s)	502, 1227, 1347, 1837
BshNI	GGYRCC	3 cut(s)	46, 602, 1530
BsiHKAI	GWGCWC	3 cut(s)	1548, 1577, 1787
BsiHKCI	CYCGRG	1 cut(s)	1526
BsiSI	CCGG	5 cut(s)	300, 449, 1183, 1195, 1859
BslI	CCNNNNNNNGG	6 cut(s)	338, 370, 396, 448, 1026, 1317
BsmAI	GTCTC	2 cut(s)	158, 391
BsmBI	CGTCTC	1 cut(s)	391
Bso31I	GGTCTC	1 cut(s)	158
BsoBI	CYCGRG	1 cut(s)	1526
Bsp119I	TTCGAA	1 cut(s)	1793
Bsp1286I	GDGCHC	3 cut(s)	1548, 1577, 1787
Bsp143I	GATC	6 cut(s)	138, 360, 438, 483, 1294, 1717
Bsp1720I	GCTNAGC	1 cut(s)	1879
Bsp19I	CCATGG	1 cut(s)	1486
BspACI	CCGC	7 cut(s)	51, 243, 303, 748, 1620, 1802, 1883
BspCNI	CTCAG	4 cut(s)	129, 242, 1000, 1294
BspHI	TCATGA	1 cut(s)	1372
BspLI	GGNNCC	7 cut(s)	48, 604, 633, 1322, 1532, 1647, 1948
BspMI	ACCTGC	1 cut(s)	833
BspPI	GGATC	3 cut(s)	355, 433, 491
BspT104I	TTCGAA	1 cut(s)	1793
BspT107I	GGYRCC	3 cut(s)	46, 602, 1530
BspTNI	GGTCTC	1 cut(s)	158
BsrDI	GCAATG	1 cut(s)	837
BsrFI	RCCGGY	1 cut(s)	1182
BsrI	ACTGG	5 cut(s)	212, 364, 742, 1060, 1416
BssAI	RCCGGY	1 cut(s)	1182
BssECI	CCNNGG	3 cut(s)	1486, 1746, 1859
BssMI	GATC	6 cut(s)	138, 360, 438, 483, 1294, 1717
BssSI	CACGAG	1 cut(s)	1570
BssT1I	CCWWGG	1 cut(s)	1486
Bst2BI	CACGAG	1 cut(s)	1570
Bst4CI	ACNGT	1 cut(s)	1212
Bst6I	CTCTTC	3 cut(s)	736, 932, 1112
BstBI	TTCGAA	1 cut(s)	1793
BstC8I	GCNNGC	7 cut(s)	500, 1184, 1226, 1470, 1618, 1800, 1817
BstDEI	CTNAG	6 cut(s)	116, 229, 987, 1302, 1879, 1936
BstDSI	CCRYGG	1 cut(s)	1486
BstEII	GGTNACC	1 cut(s)	1306
BstF5I	GGATG	4 cut(s)	276, 789, 1152, 1701
BstKTI	GATC	6 cut(s)	141, 363, 441, 486, 1297, 1720
BstMAI	GTCTC	2 cut(s)	158, 391
BstMBI	GATC	6 cut(s)	138, 360, 438, 483, 1294, 1717
BstMWI	GCNNNNNNNGC	7 cut(s)	169, 521, 638, 1595, 1816, 1847, 1976
BstNSI	RCATGY	2 cut(s)	1264, 1819
BstPI	GGTNACC	1 cut(s)	1306
BstSCI	CCNGG	2 cut(s)	447, 1858
BstV1I	GCAGC	4 cut(s)	502, 1227, 1347, 1837
BstV2I	GAAGAC	1 cut(s)	1923
Bsu36I	CCTNAGG	2 cut(s)	1302, 1936
BtgI	CCRYGG	1 cut(s)	1486
BtgZI	GCGATG	3 cut(s)	310, 321, 738
BtrI	CACGTC	1 cut(s)	1582
BtsCI	GGATG	4 cut(s)	276, 789, 1152, 1701
BtsI	GCAGTG	1 cut(s)	1119
BtsIMutI	CAGTG	4 cut(s)	463, 571, 897, 1119
BveI	ACCTGC	1 cut(s)	833
Cac8I	GCNNGC	7 cut(s)	500, 1184, 1226, 1470, 1618, 1800, 1817
CciI	TCATGA	1 cut(s)	1372
Cfr10I	RCCGGY	1 cut(s)	1182
Cfr13I	GGNCC	7 cut(s)	373, 740, 855, 983, 1563, 1646, 1947
DdeI	CTNAG	6 cut(s)	116, 229, 987, 1302, 1879, 1936
DpnI	GATC	6 cut(s)	140, 362, 440, 485, 1296, 1719
DpnII	GATC	6 cut(s)	138, 360, 438, 483, 1294, 1717
DraI	TTTAAA	2 cut(s)	405, 1333
DriI	GACNNNNNGTC	1 cut(s)	1644
EaeI	YGGCCR	3 cut(s)	97, 790, 1180
Eam1104I	CTCTTC	3 cut(s)	736, 932, 1112
Eam1105I	GACNNNNNGTC	1 cut(s)	1644
EarI	CTCTTC	3 cut(s)	736, 932, 1112
Eco130I	CCWWGG	1 cut(s)	1486
Eco147I	AGGCCT	1 cut(s)	342
Eco31I	GGTCTC	1 cut(s)	158
Eco47I	GGWCC	5 cut(s)	740, 855, 983, 1646, 1947
Eco57I	CTGAAG	2 cut(s)	1338, 1917
Eco81I	CCTNAGG	2 cut(s)	1302, 1936
Eco88I	CYCGRG	1 cut(s)	1526
Eco91I	GGTNACC	1 cut(s)	1306
EcoO109I	RGGNCCY	1 cut(s)	1947
EcoO65I	GGTNACC	1 cut(s)	1306
EcoRI	GAATTC	2 cut(s)	452, 1439
EcoT14I	CCWWGG	1 cut(s)	1486
ErhI	CCWWGG	1 cut(s)	1486
Esp3I	CGTCTC	1 cut(s)	391
FauI	CCCGC	1 cut(s)	58
FauNDI	CATATG	1 cut(s)	1963
FbaI	TGATCA	1 cut(s)	1294
Fnu4HI	GCNGC	6 cut(s)	304, 516, 1241, 1361, 1803, 1851
FokI	GGATG	4 cut(s)	263, 796, 1159, 1688
Fsp4HI	GCNGC	6 cut(s)	304, 516, 1241, 1361, 1803, 1851
FspBI	CTAG	9 cut(s)	26, 35, 122, 834, 902, 1430, 1454, 1535, 1872
GluI	GCNGC	6 cut(s)	304, 516, 1241, 1361, 1803, 1851
GsuI	CTGGAG	2 cut(s)	504, 995
HapII	CCGG	5 cut(s)	300, 449, 1183, 1195, 1859
HindIII	AAGCTT	4 cut(s)	11, 161, 1273, 1769
HinfI	GANTC	5 cut(s)	239, 556, 1133, 1396, 1973
HpaII	CCGG	5 cut(s)	300, 449, 1183, 1195, 1859
HphI	GGTGA	4 cut(s)	859, 1184, 1318, 1856
Hpy166II	GTNNAC	1 cut(s)	291
Hpy188I	TCNGA	6 cut(s)	232, 333, 885, 990, 1722, 1897
Hpy188III	TCNNGA	9 cut(s)	122, 157, 223, 442, 547, 800, 1137, 1373, 1649
Hpy8I	GTNNAC	1 cut(s)	291
Hpy99I	CGWCG	1 cut(s)	1583
HpyAV	CCTTC	8 cut(s)	208, 229, 262, 927, 1144, 1405, 1443, 1892
HpyCH4III	ACNGT	1 cut(s)	1212
HpyCH4IV	ACGT	2 cut(s)	384, 1581
HpyCH4V	TGCA	8 cut(s)	502, 647, 842, 950, 1112, 1224, 1472, 1970
HpyF10VI	GCNNNNNNNGC	7 cut(s)	169, 521, 638, 1595, 1816, 1847, 1976
HpyF3I	CTNAG	6 cut(s)	116, 229, 987, 1302, 1879, 1936
HpySE526I	ACGT	2 cut(s)	384, 1581
KpnI	GGTACC	2 cut(s)	606, 1534
KroI	GCCGGC	1 cut(s)	1182
KroNI	GCCGGC	1 cut(s)	1184
Ksp22I	TGATCA	1 cut(s)	1294
Kzo9I	GATC	6 cut(s)	138, 360, 438, 483, 1294, 1717
LmnI	GCTCC	9 cut(s)	334, 427, 523, 637, 774, 970, 1042, 1237, 1320
Lsp1109I	GCAGC	4 cut(s)	502, 1227, 1347, 1837
LweI	GCATC	1 cut(s)	1837
MaeI	CTAG	9 cut(s)	26, 35, 122, 834, 902, 1430, 1454, 1535, 1872
MaeII	ACGT	2 cut(s)	384, 1581
MaeIII	GTNAC	6 cut(s)	214, 458, 622, 1190, 1306, 1697
MalI	GATC	6 cut(s)	140, 362, 440, 485, 1296, 1719
MboI	GATC	6 cut(s)	138, 360, 438, 483, 1294, 1717
MboII	GAAGA	9 cut(s)	723, 949, 974, 1129, 1361, 1388, 1664, 1860, 1923
MfeI	CAATTG	1 cut(s)	636
MhlI	GDGCHC	3 cut(s)	1548, 1577, 1787
MlsI	TGGCCA	1 cut(s)	792
MluNI	TGGCCA	1 cut(s)	792
MlyI	GAGTC	3 cut(s)	233, 550, 1982
MmeI	TCCRAC	7 cut(s)	304, 356, 414, 752, 1498, 1667, 1867
Mox20I	TGGCCA	1 cut(s)	792
MroNI	GCCGGC	1 cut(s)	1182
MscI	TGGCCA	1 cut(s)	792
MseI	TTAA	6 cut(s)	111, 404, 996, 1314, 1332, 1635
MslI	CAYNNNNRTG	2 cut(s)	1404, 1580
Msp20I	TGGCCA	1 cut(s)	792
MspA1I	CMGCKG	2 cut(s)	524, 1802
MspI	CCGG	5 cut(s)	300, 449, 1183, 1195, 1859
MspR9I	CCNGG	2 cut(s)	449, 1860
MunI	CAATTG	1 cut(s)	636
MwoI	GCNNNNNNNGC	7 cut(s)	169, 521, 638, 1595, 1816, 1847, 1976
NaeI	GCCGGC	1 cut(s)	1184
NciI	CCSGG	2 cut(s)	449, 1860
NcoI	CCATGG	1 cut(s)	1486
NdeI	CATATG	1 cut(s)	1963
NdeII	GATC	6 cut(s)	138, 360, 438, 483, 1294, 1717
NgoMIV	GCCGGC	1 cut(s)	1182
NlaIV	GGNNCC	7 cut(s)	48, 604, 633, 1322, 1532, 1647, 1948
NmeAIII	GCCGAG	1 cut(s)	1771
NmuCI	GTSAC	3 cut(s)	458, 1190, 1306
NspI	RCATGY	2 cut(s)	1264, 1819
NspV	TTCGAA	1 cut(s)	1793
OliI	CACNNNNGTG	1 cut(s)	1580
PaeI	GCATGC	1 cut(s)	1819
PagI	TCATGA	1 cut(s)	1372
PceI	AGGCCT	1 cut(s)	342
PdiI	GCCGGC	1 cut(s)	1184
PfeI	GAWTC	2 cut(s)	1133, 1396
PflMI	CCANNNNNTGG	1 cut(s)	370
PkrI	GCNGC	6 cut(s)	305, 517, 1242, 1362, 1804, 1852
PleI	GAGTC	3 cut(s)	233, 550, 1981
PpsI	GAGTC	3 cut(s)	233, 550, 1981
PpuMI	RGGWCCY	1 cut(s)	1947
Psp5II	RGGWCCY	1 cut(s)	1947
PspEI	GGTNACC	1 cut(s)	1306
PspN4I	GGNNCC	7 cut(s)	48, 604, 633, 1322, 1532, 1647, 1948
PspPI	GGNCC	7 cut(s)	373, 740, 855, 983, 1563, 1646, 1947
PspPPI	RGGWCCY	1 cut(s)	1947
PvuII	CAGCTG	1 cut(s)	524
RseI	CAYNNNNRTG	2 cut(s)	1404, 1580
SaqAI	TTAA	6 cut(s)	111, 404, 996, 1314, 1332, 1635
SatI	GCNGC	6 cut(s)	304, 516, 1241, 1361, 1803, 1851
Sau3AI	GATC	6 cut(s)	138, 360, 438, 483, 1294, 1717
Sau96I	GGNCC	7 cut(s)	373, 740, 855, 983, 1563, 1646, 1947
ScaI	AGTACT	4 cut(s)	30, 39, 368, 1835
SchI	GAGTC	3 cut(s)	233, 550, 1982
ScrFI	CCNGG	2 cut(s)	449, 1860
SduI	GDGCHC	3 cut(s)	1548, 1577, 1787
SfaNI	GCATC	1 cut(s)	1837
SfuI	TTCGAA	1 cut(s)	1793
SinI	GGWCC	5 cut(s)	740, 855, 983, 1646, 1947
SmiMI	CAYNNNNRTG	2 cut(s)	1404, 1580
SmlI	CTYRAG	3 cut(s)	545, 798, 1706
SmoI	CTYRAG	3 cut(s)	545, 798, 1706
SpeI	ACTAGT	1 cut(s)	34
SphI	GCATGC	1 cut(s)	1819
SseBI	AGGCCT	1 cut(s)	342
SsiI	CCGC	7 cut(s)	51, 243, 303, 748, 1620, 1802, 1883
SspMI	CTAG	9 cut(s)	26, 35, 122, 834, 902, 1430, 1454, 1535, 1872
StuI	AGGCCT	1 cut(s)	342
StyD4I	CCNGG	2 cut(s)	447, 1858
StyI	CCWWGG	1 cut(s)	1486
TaaI	ACNGT	1 cut(s)	1212
TaiI	ACGT	2 cut(s)	387, 1584
TaqI	TCGA	3 cut(s)	486, 1608, 1793
TatI	WGTACW	7 cut(s)	28, 37, 288, 366, 999, 1204, 1833
TauI	GCSGC	2 cut(s)	306, 1805
TfiI	GAWTC	2 cut(s)	1133, 1396
Tru1I	TTAA	6 cut(s)	111, 404, 996, 1314, 1332, 1635
Tru9I	TTAA	6 cut(s)	111, 404, 996, 1314, 1332, 1635
TscAI	CASTG	4 cut(s)	463, 571, 897, 1119
TseFI	GTSAC	3 cut(s)	458, 1190, 1306
TseI	GCWGC	4 cut(s)	515, 1240, 1360, 1850
Tsp45I	GTSAC	3 cut(s)	458, 1190, 1306
TspDTI	ATGAA	9 cut(s)	64, 483, 800, 1146, 1163, 1361, 1388, 1389, 1947
TspGWI	ACGGA	2 cut(s)	732, 1748
TspRI	CASTG	4 cut(s)	463, 571, 897, 1119
Van91I	CCANNNNNTGG	1 cut(s)	370
VpaK11BI	GGWCC	5 cut(s)	740, 855, 983, 1646, 1947
XapI	RAATTY	5 cut(s)	400, 452, 1154, 1198, 1439
XbaI	TCTAGA	1 cut(s)	121
XceI	RCATGY	2 cut(s)	1264, 1819
XspI	CTAG	9 cut(s)	26, 35, 122, 834, 902, 1430, 1454, 1535, 1872
ZrmI	AGTACT	4 cut(s)	30, 39, 368, 1835

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.