Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006498

Physical Location & Seq

Genomic Coordinates Reverse (-)

18602651 .. 18605323

Gene Structure 2673 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ43836

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGTGGACGACATGCCCGGCCCTGGTTATGAGGACAACGCTAGTCCGGTTGACACTGATGGTCATGGCACTCACACAGCCTCCATTGTTGGTGGTGTGCCCGTCCGAGGCGCCAGCCTATATGGCATTGCAAAAGGGACTGCTCGTGGGGGAGCGCCATCGTCACGTATAGCCACGTACAAAGCATGCTGGACTGGTGGCTGCGGTGACATGAACATCTTGGCCGCGTTTGATGAAGCCATTGCTGATGGTGTGGACTTGATATCAATCTCCATTGGCGGTCCTTCACGGAATTTCCTCCAGGATTCCATTGCTCTCGGATCGTTTCATGCCATGAAGAGAGGGATTTTGGTTTCAGCCTCAGCTGGGAATGATGGACCTTATGCATCCTCTGTTCAGAATGTTGCACCATGGATAATGACTGTGGCTGCTACTGGCCTTGATAGGCGGTTAAAGACTCTAGTTAAGTTGGGCAATGGCAAGAAAATTTCTGGAAATTCAATCAATACCTTCACCCCCAAGAAACAGATGTATCCCCTTACAAGTGGAGCCCGTGCTTCCAACGTTACTTCAGACCTCTACGGAAATGCAAGTGCTTGTGACACTGGGACTTTAAACCCTCAGAAGGTGAAGGGAAGGATTGTGTTGTGCAAAGGGCAAAGTAATCAGGATCCAACTATTAAAGACTTAAATGGGGCAGGAACTATTATGACAGAAGATGAAATGCTTGATTACGGTTACACCCCTATCATCCCAGCTACCTATGTGCTTGTTAATGATGGACTTAAGATTGAGCGGTATATAAACACTACCAAGAACCCTACGGCTGTAATACAGCGGACAAGAACTGTTCATATGGATGCCCCCTTCATTGCTTCTTTCTCTTCCAGAGGACCTCAACTCATAACCCCCAACATCCTCAAGCCTGATCTTGCTGCACCAGGGATAAACATACTAGCTGCATATTCGAAGCTGCCATCTTTAACAGGTAGCCTAGAAGACATGCGCCACTATTCGTTCAACATACTCTCAGGTACATCCATGTCTTGCCCTCATGCAACTGCCTCAGCAGCCTATGTCAAGTCCTTCCACCCAGACTGGTCCCCGGCTGCCATCAAGTCGGCTCTCATGACAACCGCCACACCATTGAAAATCAAACCCCTGGAAGGCGAGTTAGCCTTCGGAGCAGGACAAATACAGCCAATAAAGGCAGTGCATCCTGGCCTAGTCTACGACATTTCCATGAACGACTACATCAGCTTCTTGTGCAAGGAAGGCTACAACAGCACCAGCATTGGAAAGCTTATTGGTGGTAAAAAGAAGTACAACTGCTCAGACTTTAAACCCGCACCCGGCACCGATGGCCTCAACTATCCTTCAATGTCCTACCTGGTGCGAAATCCGAATTCTAGCATTTCAGCTGTTTTCCTTAGATCGGTGAAGCATGTAGGGTACGGTAAGTCGGTGTACAAGGCAAAGGTGACTTCGCCAAAGGGCCTTTCGATTAGAGTCACCCCGAGTACCTTGACATTCACTAAGAAGCATCAGAAGCGATCCTTCACGGTTGTGGTGAAGGGTGGCACGATGAAAGGAAAGACAGAGAGTCTGTCTGCTCTACTAGAGTGGGATGATGGTAGGCATACGGTTAGGAGCCCCATCGTAGTCTACAGGCATACCACATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 Peptidase_S8

Protein Analysis

561

Amino Acids

59.64

Weight (kDa)

9.46

Isoelectric Point (pI)

31.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S8	PF00082	4 - 395	4.1e-42	Subtilase family
fn3_6	PF17766	456 - 555	6.9e-26	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006498)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03620 AT5G03620
malus_domestica	MD12G1022400.v1.1 MD12G1022500.v1.1 MD14G1019300.v1.1 MD14G1019400.v1.1
prunus_persica	Prupe.7G114300_v2.0.a1 Prupe.7G114300_v2.0.a1
pyrus_communis	pycom14g01900
rosa_chinensis	RchiOBHm_Chr3g0472671 RchiOBHm_Chr3g0472681
rosa_laevigata	RLG00000016130 RLG00000024064
rosa_multiflora	Rmu_sc0001616.1_g000054 Rmu_sc0003510.1_g000013
rosa_roxburghii	Rroxscaffold_5G00353850 Rroxscaffold_6G00408720 Rroxscaffold_6G00408730
rosa_rugosa	Rorug03G0127100 Rorug04G0092600
rosa_samantha	Rh3AG179800 Rh3BG205700 Rh3CG202800 Rh3DG170000 Rh3DG170100
rosa_wichuraiana	Rw3G016290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	110, 1355
AccBSI	CCGCTC	1 cut(s)	796
AccI	GTMKAC	2 cut(s)	1230, 1665
AccII	CGCG	1 cut(s)	227
AciI	CCGC	8 cut(s)	204, 225, 279, 448, 796, 838, 1137, 1347
AclI	AACGTT	1 cut(s)	564
AclWI	GGATC	4 cut(s)	328, 665, 678, 1548
AcoI	YGGCCR	1 cut(s)	222
AcsI	RAATTY	4 cut(s)	292, 486, 496, 1405
AcuI	CTGAAG	1 cut(s)	555
AcyI	GRCGYC	1 cut(s)	111
AfaI	GTAC	6 cut(s)	179, 1036, 1325, 1454, 1469, 1522
AfiI	CCNNNNNNNGG	7 cut(s)	23, 107, 366, 625, 1166, 1352, 1435
AflII	CTTAAG	1 cut(s)	785
AgsI	TTSAA	4 cut(s)	501, 1021, 1150, 1380
AhdI	GACNNNNNGTC	1 cut(s)	1602
AjnI	CCWGG	6 cut(s)	22, 300, 940, 1161, 1219, 1389
AjuI	GAANNNNNNNTTGG	2 cut(s)	1483, 1515
AleI	CACNNNNGTG	1 cut(s)	1565
AluBI	AGCT	7 cut(s)	365, 758, 959, 973, 1260, 1303, 1421
AluI	AGCT	7 cut(s)	365, 758, 959, 973, 1260, 1303, 1421
AlwI	GGATC	4 cut(s)	328, 665, 678, 1548
Ama87I	CYCGRG	1 cut(s)	1516
AoxI	GGCC	6 cut(s)	19, 222, 436, 1222, 1363, 1495
ApeKI	GCWGC	7 cut(s)	201, 428, 935, 959, 973, 1070, 1109
ApoI	RAATTY	4 cut(s)	292, 486, 496, 1405
AspLEI	GCGC	3 cut(s)	113, 157, 1008
AspS9I	GGNCC	6 cut(s)	20, 281, 377, 893, 1101, 1495
AsuC2I	CCSGG	3 cut(s)	18, 1106, 1353
AsuHPI	GGTGA	7 cut(s)	218, 505, 640, 1450, 1492, 1504, 1582
AsuII	TTCGAA	1 cut(s)	968
AvaI	CYCGRG	1 cut(s)	1516
AvaII	GGWCC	4 cut(s)	281, 377, 893, 1101
BaeGI	GKGCMC	1 cut(s)	102
BaeI	ACNNNNGTAYC	2 cut(s)	515, 548
BamHI	GGATCC	1 cut(s)	670
BanI	GGYRCC	2 cut(s)	110, 1355
BanII	GRGCYC	2 cut(s)	553, 1655
BauI	CACGAG	1 cut(s)	144
BbsI	GAAGAC	1 cut(s)	1005
BbvCI	CCTCAGC	2 cut(s)	361, 1066
BbvI	GCAGC	7 cut(s)	188, 415, 922, 946, 960, 1082, 1096
BceAI	ACGGC	1 cut(s)	840
BciT130I	CCWGG	6 cut(s)	24, 302, 942, 1163, 1221, 1391
BciVI	GTATCC	1 cut(s)	543
BcnI	CCSGG	3 cut(s)	18, 1106, 1353
BfaI	CTAG	7 cut(s)	42, 461, 956, 995, 1226, 1410, 1619
BfmI	CTRYAG	1 cut(s)	1666
BfoI	RGCGCY	2 cut(s)	114, 158
BfrI	CTTAAG	1 cut(s)	785
BfuI	GTATCC	1 cut(s)	543
BglI	GCCNNNNNGGC	1 cut(s)	123
BisI	GCNGC	8 cut(s)	202, 225, 429, 936, 960, 974, 1071, 1110
BlsI	GCNGC	8 cut(s)	203, 226, 430, 937, 961, 975, 1072, 1111
Bme1390I	CCNGG	9 cut(s)	18, 24, 302, 942, 1106, 1163, 1221, 1353, 1391
Bme18I	GGWCC	4 cut(s)	281, 377, 893, 1101
BmeRI	GACNNNNNGTC	1 cut(s)	1602
BmeT110I	CYCGRG	1 cut(s)	1516
BmgT120I	GGNCC	6 cut(s)	20, 281, 377, 893, 1101, 1495
BmiI	GGNNCC	6 cut(s)	112, 550, 672, 1103, 1357, 1652
BmrFI	CCNGG	9 cut(s)	18, 24, 302, 942, 1106, 1163, 1221, 1353, 1391
BmrI	ACTGGG	1 cut(s)	615
BmsI	GCATC	4 cut(s)	395, 850, 1225, 1552
BmuI	ACTGGG	1 cut(s)	615
BpiI	GAAGAC	1 cut(s)	1005
BpmI	CTGGAG	1 cut(s)	284
Bpu10I	CCTNAGC	2 cut(s)	361, 1066
Bpu14I	TTCGAA	1 cut(s)	968
BpuEI	CTTGAG	1 cut(s)	905
BpuMI	CCSGG	3 cut(s)	18, 1106, 1353
BsaAI	YACGTR	2 cut(s)	167, 177
BsaBI	GATNNNNATC	1 cut(s)	266
BsaHI	GRCGYC	1 cut(s)	111
BsaJI	CCNNGG	6 cut(s)	22, 106, 410, 941, 1104, 1161
BsaWI	WCCGGW	1 cut(s)	46
BsaXI	ACNNNNNCTCC	2 cut(s)	65, 95
Bsc4I	CCNNNNNNNGG	7 cut(s)	23, 107, 366, 625, 1166, 1352, 1435
Bse1I	ACTGG	4 cut(s)	199, 439, 610, 1103
Bse3DI	GCAATG	5 cut(s)	126, 240, 309, 481, 870
Bse8I	GATNNNNATC	1 cut(s)	266
BseBI	CCWGG	6 cut(s)	24, 302, 942, 1163, 1221, 1391
BseDI	CCNNGG	6 cut(s)	22, 106, 410, 941, 1104, 1161
BseGI	GGATG	7 cut(s)	386, 750, 865, 915, 1037, 1216, 1633
BseJI	GATNNNNATC	1 cut(s)	266
BseLI	CCNNNNNNNGG	7 cut(s)	23, 107, 366, 625, 1166, 1352, 1435
BseMI	GCAATG	5 cut(s)	126, 240, 309, 481, 870
BseMII	CTCAG	5 cut(s)	375, 635, 1044, 1080, 1347
BseNI	ACTGG	4 cut(s)	199, 439, 610, 1103
BseSI	GKGCMC	1 cut(s)	102
BseXI	GCAGC	7 cut(s)	188, 415, 922, 946, 960, 1082, 1096
BseYI	CCCAGC	2 cut(s)	365, 754
BsgI	GTGCAG	1 cut(s)	921
Bsh1236I	CGCG	1 cut(s)	227
BshFI	GGCC	6 cut(s)	21, 224, 438, 1224, 1365, 1497
BshNI	GGYRCC	2 cut(s)	110, 1355
BsiHKCI	CYCGRG	1 cut(s)	1516
BsiSI	CCGG	4 cut(s)	18, 47, 1106, 1353
BslFI	GGGAC	3 cut(s)	151, 622, 1087
BslI	CCNNNNNNNGG	7 cut(s)	23, 107, 366, 625, 1166, 1352, 1435
BsmFI	GGGAC	3 cut(s)	151, 622, 1087
BsnI	GGCC	6 cut(s)	21, 224, 438, 1224, 1365, 1497
BsoBI	CYCGRG	1 cut(s)	1516
Bsp119I	TTCGAA	1 cut(s)	968
Bsp1286I	GDGCHC	3 cut(s)	102, 553, 1655
Bsp1407I	TGTACA	1 cut(s)	1467
Bsp143I	GATC	5 cut(s)	320, 670, 928, 1433, 1553
Bsp19I	CCATGG	1 cut(s)	410
BspACI	CCGC	8 cut(s)	204, 225, 279, 448, 796, 838, 1137, 1347
BspANI	GGCC	6 cut(s)	21, 224, 438, 1224, 1365, 1497
BspCNI	CTCAG	5 cut(s)	374, 634, 1043, 1079, 1346
BspFNI	CGCG	1 cut(s)	227
BspHI	TCATGA	1 cut(s)	1128
BspLI	GGNNCC	6 cut(s)	112, 550, 672, 1103, 1357, 1652
BspPI	GGATC	4 cut(s)	328, 665, 678, 1548
BspT104I	TTCGAA	1 cut(s)	968
BspT107I	GGYRCC	2 cut(s)	110, 1355
BspTI	CTTAAG	1 cut(s)	785
BsrBI	CCGCTC	1 cut(s)	796
BsrDI	GCAATG	5 cut(s)	126, 240, 309, 481, 870
BsrGI	TGTACA	1 cut(s)	1467
BsrI	ACTGG	4 cut(s)	199, 439, 610, 1103
BssECI	CCNNGG	6 cut(s)	22, 106, 410, 941, 1104, 1161
BssMI	GATC	5 cut(s)	320, 670, 928, 1433, 1553
BssNI	GRCGYC	1 cut(s)	111
BssSI	CACGAG	1 cut(s)	144
BssT1I	CCWWGG	1 cut(s)	410
Bst2BI	CACGAG	1 cut(s)	144
Bst2UI	CCWGG	6 cut(s)	24, 302, 942, 1163, 1221, 1391
Bst4CI	ACNGT	6 cut(s)	424, 737, 850, 1457, 1564, 1645
Bst6I	CTCTTC	2 cut(s)	332, 889
BstACI	GRCGYC	1 cut(s)	111
BstAFI	CTTAAG	1 cut(s)	785
BstAUI	TGTACA	1 cut(s)	1467
BstBAI	YACGTR	2 cut(s)	167, 177
BstBI	TTCGAA	1 cut(s)	968
BstC8I	GCNNGC	2 cut(s)	115, 187
BstDEI	CTNAG	7 cut(s)	361, 621, 1030, 1066, 1333, 1430, 1536
BstDSI	CCRYGG	1 cut(s)	410
BstF5I	GGATG	7 cut(s)	386, 750, 865, 915, 1037, 1216, 1633
BstFNI	CGCG	1 cut(s)	227
BstH2I	RGCGCY	2 cut(s)	114, 158
BstHHI	GCGC	3 cut(s)	113, 157, 1008
BstKTI	GATC	5 cut(s)	323, 673, 931, 1436, 1556
BstMBI	GATC	5 cut(s)	320, 670, 928, 1433, 1553
BstMWI	GCNNNNNNNGC	8 cut(s)	123, 1070, 1184, 1266, 1275, 1284, 1362, 1549
BstNI	CCWGG	6 cut(s)	24, 302, 942, 1163, 1221, 1391
BstNSI	RCATGY	4 cut(s)	16, 189, 1006, 1448
BstSCI	CCNGG	9 cut(s)	16, 22, 300, 940, 1104, 1161, 1219, 1351, 1389
BstSFI	CTRYAG	1 cut(s)	1666
BstSLI	GKGCMC	1 cut(s)	102
BstUI	CGCG	1 cut(s)	227
BstV1I	GCAGC	7 cut(s)	188, 415, 922, 946, 960, 1082, 1096
BstV2I	GAAGAC	1 cut(s)	1005
BstX2I	RGATCY	1 cut(s)	670
BstYI	RGATCY	1 cut(s)	670
BsuI	GTATCC	1 cut(s)	543
BsuRI	GGCC	6 cut(s)	21, 224, 438, 1224, 1365, 1497
BtgI	CCRYGG	1 cut(s)	410
BtsCI	GGATG	7 cut(s)	386, 750, 865, 915, 1037, 1216, 1633
BtsI	GCAGTG	1 cut(s)	1218
BtsIMutI	CAGTG	3 cut(s)	54, 603, 1218
Cac8I	GCNNGC	2 cut(s)	115, 187
CciI	TCATGA	1 cut(s)	1128
CfoI	GCGC	3 cut(s)	113, 157, 1008
Cfr13I	GGNCC	6 cut(s)	20, 281, 377, 893, 1101, 1495
CsiI	ACCWGGT	1 cut(s)	1389
Csp6I	GTAC	6 cut(s)	178, 1035, 1324, 1453, 1468, 1521
CviQI	GTAC	6 cut(s)	178, 1035, 1324, 1453, 1468, 1521
DdeI	CTNAG	7 cut(s)	361, 621, 1030, 1066, 1333, 1430, 1536
DinI	GGCGCC	1 cut(s)	112
DpnI	GATC	5 cut(s)	322, 672, 930, 1435, 1555
DpnII	GATC	5 cut(s)	320, 670, 928, 1433, 1553
DraI	TTTAAA	2 cut(s)	615, 1342
DriI	GACNNNNNGTC	1 cut(s)	1602
EaeI	YGGCCR	1 cut(s)	222
Eam1104I	CTCTTC	2 cut(s)	332, 889
Eam1105I	GACNNNNNGTC	1 cut(s)	1602
EarI	CTCTTC	2 cut(s)	332, 889
Eco130I	CCWWGG	1 cut(s)	410
Eco24I	GRGCYC	2 cut(s)	553, 1655
Eco32I	GATATC	1 cut(s)	264
Eco47I	GGWCC	4 cut(s)	281, 377, 893, 1101
Eco57I	CTGAAG	1 cut(s)	555
Eco88I	CYCGRG	1 cut(s)	1516
EcoO109I	RGGNCCY	2 cut(s)	893, 1495
EcoRI	GAATTC	1 cut(s)	1405
EcoRII	CCWGG	6 cut(s)	22, 300, 940, 1161, 1219, 1389
EcoRV	GATATC	1 cut(s)	264
EcoT14I	CCWWGG	1 cut(s)	410
EcoT22I	ATGCAT	1 cut(s)	388
EcoT38I	GRGCYC	2 cut(s)	553, 1655
EgeI	GGCGCC	1 cut(s)	112
EheI	GGCGCC	1 cut(s)	112
ErhI	CCWWGG	1 cut(s)	410
FalI	AAGNNNNNCTT	2 cut(s)	1541, 1573
FaqI	GGGAC	3 cut(s)	151, 622, 1087
FauI	CCCGC	1 cut(s)	1354
FauNDI	CATATG	1 cut(s)	855
FblI	GTMKAC	2 cut(s)	1230, 1665
Fnu4HI	GCNGC	8 cut(s)	202, 225, 429, 936, 960, 974, 1071, 1110
FokI	GGATG	7 cut(s)	373, 737, 872, 902, 1024, 1203, 1640
FriOI	GRGCYC	2 cut(s)	553, 1655
Fsp4HI	GCNGC	8 cut(s)	202, 225, 429, 936, 960, 974, 1071, 1110
FspBI	CTAG	7 cut(s)	42, 461, 956, 995, 1226, 1410, 1619
GlaI	GCGC	3 cut(s)	112, 156, 1007
GluI	GCNGC	8 cut(s)	202, 225, 429, 936, 960, 974, 1071, 1110
GsaI	CCCAGC	2 cut(s)	369, 758
GsuI	CTGGAG	1 cut(s)	284
HaeII	RGCGCY	2 cut(s)	114, 158
HaeIII	GGCC	6 cut(s)	21, 224, 438, 1224, 1365, 1497
HapII	CCGG	4 cut(s)	18, 47, 1106, 1353
HhaI	GCGC	3 cut(s)	113, 157, 1008
Hin1I	GRCGYC	1 cut(s)	111
Hin6I	GCGC	3 cut(s)	111, 155, 1006
HinP1I	GCGC	3 cut(s)	111, 155, 1006
HincII	GTYRAC	1 cut(s)	52
HindII	GTYRAC	1 cut(s)	52
HindIII	AAGCTT	1 cut(s)	1301
HinfI	GANTC	4 cut(s)	305, 457, 1509, 1603
HpaII	CCGG	4 cut(s)	18, 47, 1106, 1353
HphI	GGTGA	7 cut(s)	218, 505, 640, 1450, 1492, 1504, 1582
Hpy166II	GTNNAC	6 cut(s)	7, 52, 256, 1231, 1468, 1666
Hpy188I	TCNGA	9 cut(s)	107, 320, 399, 574, 624, 1184, 1336, 1404, 1548
Hpy188III	TCNNGA	4 cut(s)	492, 668, 888, 1129
Hpy8I	GTNNAC	6 cut(s)	7, 52, 256, 1231, 1468, 1666
HpyCH4III	ACNGT	6 cut(s)	424, 737, 850, 1457, 1564, 1645
HpyCH4IV	ACGT	3 cut(s)	166, 176, 564
HpyF10VI	GCNNNNNNNGC	8 cut(s)	123, 1070, 1184, 1266, 1275, 1284, 1362, 1549
HpyF3I	CTNAG	7 cut(s)	361, 621, 1030, 1066, 1333, 1430, 1536
HpySE526I	ACGT	3 cut(s)	166, 176, 564
Hsp92I	GRCGYC	1 cut(s)	111
HspAI	GCGC	3 cut(s)	111, 155, 1006
KasI	GGCGCC	1 cut(s)	110
Kzo9I	GATC	5 cut(s)	320, 670, 928, 1433, 1553
LmnI	GCTCC	4 cut(s)	152, 548, 1184, 1650
Lsp1109I	GCAGC	7 cut(s)	188, 415, 922, 946, 960, 1082, 1096
LweI	GCATC	4 cut(s)	395, 850, 1225, 1552
MabI	ACCWGGT	1 cut(s)	1389
MaeI	CTAG	7 cut(s)	42, 461, 956, 995, 1226, 1410, 1619
MaeII	ACGT	3 cut(s)	166, 176, 564
MaeIII	GTNAC	7 cut(s)	162, 206, 565, 599, 737, 1480, 1510
MalI	GATC	5 cut(s)	322, 672, 930, 1435, 1555
MbiI	CCGCTC	1 cut(s)	796
MboI	GATC	5 cut(s)	320, 670, 928, 1433, 1553
MboII	GAAGA	4 cut(s)	349, 728, 876, 1010
MflI	RGATCY	1 cut(s)	670
MhlI	GDGCHC	3 cut(s)	102, 553, 1655
MluCI	AATT	4 cut(s)	292, 486, 496, 1405
Mly113I	GGCGCC	1 cut(s)	111
MlyI	GAGTC	3 cut(s)	451, 1518, 1612
MmeI	TCCRAC	2 cut(s)	585, 698
Mph1103I	ATGCAT	1 cut(s)	388
MseI	TTAA	9 cut(s)	452, 465, 614, 681, 689, 774, 786, 983, 1341
MslI	CAYNNNNRTG	3 cut(s)	858, 1241, 1565
MspA1I	CMGCKG	3 cut(s)	365, 838, 1421
MspCI	CTTAAG	1 cut(s)	785
MspI	CCGG	4 cut(s)	18, 47, 1106, 1353
MspR9I	CCNGG	9 cut(s)	18, 24, 302, 942, 1106, 1163, 1221, 1353, 1391
MvaI	CCWGG	6 cut(s)	24, 302, 942, 1163, 1221, 1391
MvnI	CGCG	1 cut(s)	227
MwoI	GCNNNNNNNGC	8 cut(s)	123, 1070, 1184, 1266, 1275, 1284, 1362, 1549
NarI	GGCGCC	1 cut(s)	111
NciI	CCSGG	3 cut(s)	18, 1106, 1353
NcoI	CCATGG	1 cut(s)	410
NdeI	CATATG	1 cut(s)	855
NdeII	GATC	5 cut(s)	320, 670, 928, 1433, 1553
NlaIV	GGNNCC	6 cut(s)	112, 550, 672, 1103, 1357, 1652
NmuCI	GTSAC	5 cut(s)	162, 206, 599, 1480, 1510
NsiI	ATGCAT	1 cut(s)	388
NspI	RCATGY	4 cut(s)	16, 189, 1006, 1448
NspV	TTCGAA	1 cut(s)	968
OliI	CACNNNNGTG	1 cut(s)	1565
PaeI	GCATGC	1 cut(s)	189
PagI	TCATGA	1 cut(s)	1128
PfeI	GAWTC	1 cut(s)	305
PfoI	TCCNGGA	1 cut(s)	300
PkrI	GCNGC	8 cut(s)	203, 226, 430, 937, 961, 975, 1072, 1111
PleI	GAGTC	3 cut(s)	451, 1517, 1611
PluTI	GGCGCC	1 cut(s)	114
PpsI	GAGTC	3 cut(s)	451, 1517, 1611
Ppu21I	YACGTR	2 cut(s)	167, 177
PpuMI	RGGWCCY	1 cut(s)	893
Psp1406I	AACGTT	1 cut(s)	564
Psp5II	RGGWCCY	1 cut(s)	893
Psp6I	CCWGG	6 cut(s)	22, 300, 940, 1161, 1219, 1389
PspFI	CCCAGC	2 cut(s)	365, 754
PspGI	CCWGG	6 cut(s)	22, 300, 940, 1161, 1219, 1389
PspN4I	GGNNCC	6 cut(s)	112, 550, 672, 1103, 1357, 1652
PspPI	GGNCC	6 cut(s)	20, 281, 377, 893, 1101, 1495
PspPPI	RGGWCCY	1 cut(s)	893
PsuI	RGATCY	1 cut(s)	670
PvuII	CAGCTG	2 cut(s)	365, 1421
RsaI	GTAC	6 cut(s)	179, 1036, 1325, 1454, 1469, 1522
RsaNI	GTAC	6 cut(s)	178, 1035, 1324, 1453, 1468, 1521
RseI	CAYNNNNRTG	3 cut(s)	858, 1241, 1565
SaqAI	TTAA	9 cut(s)	452, 465, 614, 681, 689, 774, 786, 983, 1341
SatI	GCNGC	8 cut(s)	202, 225, 429, 936, 960, 974, 1071, 1110
Sau3AI	GATC	5 cut(s)	320, 670, 928, 1433, 1553
Sau96I	GGNCC	6 cut(s)	20, 281, 377, 893, 1101, 1495
SchI	GAGTC	3 cut(s)	451, 1518, 1612
ScrFI	CCNGG	9 cut(s)	18, 24, 302, 942, 1106, 1163, 1221, 1353, 1391
SduI	GDGCHC	3 cut(s)	102, 553, 1655
SexAI	ACCWGGT	1 cut(s)	1389
SfaNI	GCATC	4 cut(s)	395, 850, 1225, 1552
SfcI	CTRYAG	1 cut(s)	1666
SfoI	GGCGCC	1 cut(s)	112
SfuI	TTCGAA	1 cut(s)	968
SinI	GGWCC	4 cut(s)	281, 377, 893, 1101
SmiMI	CAYNNNNRTG	3 cut(s)	858, 1241, 1565
SmlI	CTYRAG	2 cut(s)	785, 920
SmoI	CTYRAG	2 cut(s)	785, 920
SphI	GCATGC	1 cut(s)	189
Sse9I	AATT	4 cut(s)	292, 486, 496, 1405
SsiI	CCGC	8 cut(s)	204, 225, 279, 448, 796, 838, 1137, 1347
SspDI	GGCGCC	1 cut(s)	110
SspMI	CTAG	7 cut(s)	42, 461, 956, 995, 1226, 1410, 1619
StyD4I	CCNGG	9 cut(s)	16, 22, 300, 940, 1104, 1161, 1219, 1351, 1389
StyI	CCWWGG	1 cut(s)	410
TaaI	ACNGT	6 cut(s)	424, 737, 850, 1457, 1564, 1645
TaiI	ACGT	3 cut(s)	169, 179, 567
TaqI	TCGA	2 cut(s)	968, 1502
TasI	AATT	4 cut(s)	292, 486, 496, 1405
TatI	WGTACW	2 cut(s)	1323, 1467
TauI	GCSGC	1 cut(s)	227
TfiI	GAWTC	1 cut(s)	305
Tru1I	TTAA	9 cut(s)	452, 465, 614, 681, 689, 774, 786, 983, 1341
Tru9I	TTAA	9 cut(s)	452, 465, 614, 681, 689, 774, 786, 983, 1341
TscAI	CASTG	3 cut(s)	61, 610, 1218
TseFI	GTSAC	5 cut(s)	162, 206, 599, 1480, 1510
TseI	GCWGC	7 cut(s)	201, 428, 935, 959, 973, 1070, 1109
Tsp45I	GTSAC	5 cut(s)	162, 206, 599, 1480, 1510
TspDTI	ATGAA	9 cut(s)	227, 249, 317, 350, 735, 842, 859, 1259, 1601
TspGWI	ACGGA	2 cut(s)	304, 597
TspRI	CASTG	3 cut(s)	61, 610, 1218
Vha464I	CTTAAG	1 cut(s)	785
VpaK11BI	GGWCC	4 cut(s)	281, 377, 893, 1101
XapI	RAATTY	4 cut(s)	292, 486, 496, 1405
XceI	RCATGY	4 cut(s)	16, 189, 1006, 1448
XmiI	GTMKAC	2 cut(s)	1230, 1665
XspI	CTAG	7 cut(s)	42, 461, 956, 995, 1226, 1410, 1619
Zsp2I	ATGCAT	1 cut(s)	388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.