Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0006498

Physical Location & Seq

Genomic Coordinates Forward (+)

10242285 .. 10244407

Gene Structure 2123 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0127100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGCAGATGGAGCTCCAGCCACAACCACACGTACTACTATTGCCCTTCCCAGCACAAGGCCACATCAAGCCCATGCTAGCCTTGGCGCAGCTTCTCTGCCACGCCGGCATCCACGTCACCTTCCTCAACACCGATCATAACCACCGCCAGCTCACCCAACGCCAAGCCCTCTCCACCCGATTCCCTACTCTCCACTTCCACTCCATCTCCGACGGCCTCCCCTCCGATCATCCACGCTCCATTTCCCCTAATCTCATGGACATAGTCACGTCCCTGAGGTCCAAAACGGCGCCGCTCCTGCATCAACTCCTGGTCTCCCTCATGAGCAAAAACGACGTCGGCTCTGCAGCTCAGCTGCCTCCTTTGGGCTGTGTGATAACAGACGGGATCATGTGTTTCGCAATTGAAGTGGCGGAGGAGGTCGGAATTCCCGTAATTGCCCTCCGCACCACCAGCGCTTGCAGCTTCTGGTGTTACTCATGCATCCCCAAGCTAATTGAAGAAGCTCAGCTGCCTTTTGGAGATCATGATATGGATAAGATAGTGAGCGGCATTCCTGGGATGGAATGCCTTTTACGACGAAGAGACCTACCGAGTATTTGCAGAGTACCAACGGACCACCCGGTTATCCAGTTTTTCATGGAAGAGACCAGAGCCATAACTCGAGCTTCTAGTCTCATACTCAACACTTTTGACGACCTCGAATCCTCAGTTCTCTCCCACATTGCCTCTCGATTTTCAAAAATTTACACCATCGGACCATTGCATGCTCTCCTCAACTCTCGTGTCGTGGACGACAACCTATCTTCCTCATCCTCCGCCGCCGCCTCTTTGCGCCAAGAAGACCGTGGTTGCATGATGTGGTTAGACTCCCAAAGGGTTGGGTCTGTTATTTTCGTTAGCTTCGGGAGTTTGGTGAAACTAACACGTGTTCAATTACTAGAGTTTTGGCACGGATTGGTTAATAGTGGGTCCCCTTTTCTATGGGTCATCCGCTCAGATGTGCTATGGGGTGATGAAGGAGAGCAAGCGAGTCACGTAACCCCAGCGGAGTTGGAGATGGGTACAAAAGAACGGGGGTTTATAGTCGATTGGGCTCCACAAGAAGAGGTCCTGGCCCATGAAGCTGTAGGTGGGTTTCTGACCCATAGCGGGTGGAATTCGACACTGGAGGCAATTTGGGCCGGAGTCCCAATGCTTTGCTGGCCCCAACTAGCAGACCAGCAAGTGAATAGTAGATGGGTTGGAGAGGTTTGGAAGATTGGGGTTGATATGAAAGACACGTGTGATAGATCGACGGTCGAGAAGATGATCAAAGCCTTGATGAAAGGTGAAGATAAAGAGGTGATTTCAAGGTCAGTGGATCATTTTGCAAAATTGGCGCGGACTTCTGTTAGTAAAAGTGGCTCTTCATACCTTAATCTGGAGAAATTTATTCAAGACTTGAGAAATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0016787 GO:0017171 GO:0019538 GO:0043170 GO:0044238 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 Peptidase_S8

Protein Analysis

485

Amino Acids

53.92

Weight (kDa)

5.94

Isoelectric Point (pI)

48.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_N	PF26168	11 - 69	1e-06	Glycosyltransferase, N-terminal domain
UDPGT	PF00201	279 - 448	1.1e-21	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006498)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03620 AT5G03620
malus_domestica	MD12G1022400.v1.1 MD12G1022500.v1.1 MD14G1019300.v1.1 MD14G1019400.v1.1
prunus_persica	Prupe.7G114300_v2.0.a1 Prupe.7G114300_v2.0.a1
pyrus_communis	pycom14g01900
rosa_chinensis	RchiOBHm_Chr3g0472671 RchiOBHm_Chr3g0472681
rosa_laevigata	RLG00000016130 RLG00000024064
rosa_multiflora	Rmu_sc0001616.1_g000054 Rmu_sc0003510.1_g000013
rosa_roxburghii	Rroxscaffold_5G00353850 Rroxscaffold_6G00408720 Rroxscaffold_6G00408730
rosa_rugosa	Rorug03G0127100 Rorug04G0092600
rosa_samantha	Rh3AG179800 Rh3BG205700 Rh3CG202800 Rh3DG170000 Rh3DG170100
rosa_wichuraiana	Rw3G016290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	339
AccB1I	GGYRCC	1 cut(s)	289
AccBSI	CCGCTC	3 cut(s)	295, 549, 996
AccII	CGCG	1 cut(s)	1384
AclWI	GGATC	2 cut(s)	395, 1371
AcsI	RAATTY	5 cut(s)	426, 744, 1159, 1430, 1450
AcvI	CACGTG	2 cut(s)	929, 1284
AcyI	GRCGYC	2 cut(s)	290, 336
AfaI	GTAC	3 cut(s)	33, 609, 1066
AfeI	AGCGCT	1 cut(s)	457
AfiI	CCNNNNNNNGG	4 cut(s)	56, 365, 1152, 1423
AflIII	ACRYGT	5 cut(s)	28, 926, 928, 1281, 1283
AgsI	TTSAA	6 cut(s)	407, 500, 741, 935, 1353, 1439
AjiI	CACGTC	2 cut(s)	115, 270
AjnI	CCWGG	3 cut(s)	309, 556, 1113
Alw21I	GWGCWC	1 cut(s)	15
Alw26I	GTCTC	4 cut(s)	319, 579, 641, 680
AlwI	GGATC	2 cut(s)	395, 1371
AlwNI	CAGNNNCTG	1 cut(s)	468
Ama87I	CYCGRG	1 cut(s)	663
Aor51HI	AGCGCT	1 cut(s)	457
AoxI	GGCC	5 cut(s)	58, 214, 1116, 1182, 1205
ApeKI	GCWGC	5 cut(s)	88, 347, 355, 462, 511
ApoI	RAATTY	5 cut(s)	426, 744, 1159, 1430, 1450
ArsI	GACNNNNNNTTYG	2 cut(s)	321, 353
AspLEI	GCGC	5 cut(s)	88, 292, 458, 837, 1384
AspS9I	GGNCC	8 cut(s)	279, 616, 758, 972, 1111, 1117, 1182, 1206
AsuC2I	CCSGG	1 cut(s)	623
AsuHPI	GGTGA	6 cut(s)	109, 145, 928, 1025, 1343, 1357
AsuNHI	GCTAGC	1 cut(s)	76
AvaI	CYCGRG	1 cut(s)	663
AvaII	GGWCC	5 cut(s)	279, 616, 758, 972, 1111
AxyI	CCTNAGG	1 cut(s)	275
BanI	GGYRCC	1 cut(s)	289
BanII	GRGCYC	2 cut(s)	15, 1099
BauI	CACGAG	1 cut(s)	783
BbrPI	CACGTG	2 cut(s)	929, 1284
BbsI	GAAGAC	1 cut(s)	849
Bbv12I	GWGCWC	1 cut(s)	15
BbvI	GCAGC	5 cut(s)	100, 342, 359, 474, 498
BccI	CCATC	5 cut(s)	212, 556, 761, 1054, 1233
BceAI	ACGGC	2 cut(s)	229, 303
BciT130I	CCWGG	3 cut(s)	311, 558, 1115
BclI	TGATCA	1 cut(s)	1311
BcnI	CCSGG	1 cut(s)	623
BcoDI	GTCTC	4 cut(s)	319, 579, 641, 680
BfaI	CTAG	4 cut(s)	77, 672, 941, 1214
BfmI	CTRYAG	2 cut(s)	345, 1128
BfoI	RGCGCY	2 cut(s)	293, 459
BglI	GCCNNNNNGGC	1 cut(s)	105
BisI	GCNGC	9 cut(s)	89, 293, 348, 356, 463, 512, 550, 822, 825
BlpI	GCTNAGC	2 cut(s)	351, 507
BlsI	GCNGC	9 cut(s)	90, 294, 349, 357, 464, 513, 551, 823, 826
Bme1390I	CCNGG	4 cut(s)	311, 558, 623, 1115
Bme18I	GGWCC	5 cut(s)	279, 616, 758, 972, 1111
BmeT110I	CYCGRG	1 cut(s)	663
BmgBI	CACGTC	2 cut(s)	115, 270
BmgT120I	GGNCC	8 cut(s)	279, 616, 758, 972, 1111, 1117, 1182, 1206
BmiI	GGNNCC	5 cut(s)	291, 973, 974, 1098, 1208
BmrFI	CCNGG	4 cut(s)	311, 558, 623, 1115
BmsI	GCATC	3 cut(s)	117, 310, 492
BmtI	GCTAGC	1 cut(s)	80
BpiI	GAAGAC	1 cut(s)	849
BpmI	CTGGAG	2 cut(s)	1190, 1445
Bpu1102I	GCTNAGC	2 cut(s)	351, 507
BpuMI	CCSGG	1 cut(s)	623
BsaAI	YACGTR	4 cut(s)	31, 929, 1039, 1284
BsaHI	GRCGYC	2 cut(s)	290, 336
BsaI	GGTCTC	3 cut(s)	319, 579, 641
BsaJI	CCNNGG	3 cut(s)	81, 557, 847
BsaXI	ACNNNNNCTCC	4 cut(s)	185, 191, 215, 221
Bsc4I	CCNNNNNNNGG	4 cut(s)	56, 365, 1152, 1423
Bse118I	RCCGGY	1 cut(s)	104
Bse1I	ACTGG	2 cut(s)	631, 1173
Bse21I	CCTNAGG	1 cut(s)	275
Bse3DI	GCAATG	2 cut(s)	723, 761
BseBI	CCWGG	3 cut(s)	311, 558, 1115
BseDI	CCNNGG	3 cut(s)	81, 557, 847
BseGI	GGATG	6 cut(s)	108, 229, 483, 567, 812, 990
BseLI	CCNNNNNNNGG	4 cut(s)	56, 365, 1152, 1423
BseMI	GCAATG	2 cut(s)	723, 761
BseMII	CTCAG	5 cut(s)	266, 365, 521, 723, 1011
BseNI	ACTGG	2 cut(s)	631, 1173
BseRI	GAGGAG	2 cut(s)	431, 764
BseXI	GCAGC	5 cut(s)	100, 342, 359, 474, 498
BseYI	CCCAGC	2 cut(s)	49, 1045
Bsh1236I	CGCG	1 cut(s)	1384
Bsh1285I	CGRYCG	1 cut(s)	1302
BshFI	GGCC	5 cut(s)	60, 216, 1118, 1184, 1207
BshNI	GGYRCC	1 cut(s)	289
BsiEI	CGRYCG	1 cut(s)	1302
BsiHKAI	GWGCWC	1 cut(s)	15
BsiHKCI	CYCGRG	1 cut(s)	663
BsiSI	CCGG	3 cut(s)	105, 623, 1185
BslFI	GGGAC	3 cut(s)	256, 958, 1175
BslI	CCNNNNNNNGG	4 cut(s)	56, 365, 1152, 1423
BsmAI	GTCTC	4 cut(s)	319, 579, 641, 680
BsmFI	GGGAC	3 cut(s)	256, 958, 1175
BsmI	GAATGC	2 cut(s)	552, 572
BsnI	GGCC	5 cut(s)	60, 216, 1118, 1184, 1207
Bso31I	GGTCTC	3 cut(s)	319, 579, 641
BsoBI	CYCGRG	1 cut(s)	663
Bsp1286I	GDGCHC	2 cut(s)	15, 1099
Bsp143I	GATC	7 cut(s)	133, 226, 387, 523, 1292, 1311, 1363
Bsp1720I	GCTNAGC	2 cut(s)	351, 507
BspANI	GGCC	5 cut(s)	60, 216, 1118, 1184, 1207
BspCNI	CTCAG	5 cut(s)	267, 364, 520, 722, 1010
BspFNI	CGCG	1 cut(s)	1384
BspHI	TCATGA	2 cut(s)	321, 526
BspLI	GGNNCC	5 cut(s)	291, 973, 974, 1098, 1208
BspMAI	CTGCAG	1 cut(s)	349
BspOI	GCTAGC	1 cut(s)	80
BspPI	GGATC	2 cut(s)	395, 1371
BspQI	GCTCTTC	1 cut(s)	1414
BspT107I	GGYRCC	1 cut(s)	289
BspTNI	GGTCTC	3 cut(s)	319, 579, 641
BsrBI	CCGCTC	3 cut(s)	295, 549, 996
BsrDI	GCAATG	2 cut(s)	723, 761
BsrFI	RCCGGY	1 cut(s)	104
BsrI	ACTGG	2 cut(s)	631, 1173
BssAI	RCCGGY	1 cut(s)	104
BssECI	CCNNGG	3 cut(s)	81, 557, 847
BssMI	GATC	7 cut(s)	133, 226, 387, 523, 1292, 1311, 1363
BssNI	GRCGYC	2 cut(s)	290, 336
BssSI	CACGAG	1 cut(s)	783
BssT1I	CCWWGG	1 cut(s)	81
Bst2BI	CACGAG	1 cut(s)	783
Bst2UI	CCWGG	3 cut(s)	311, 558, 1115
Bst4CI	ACNGT	2 cut(s)	848, 1300
Bst6I	CTCTTC	4 cut(s)	577, 639, 1101, 1414
BstACI	GRCGYC	2 cut(s)	290, 336
BstBAI	YACGTR	4 cut(s)	31, 929, 1039, 1284
BstC8I	GCNNGC	7 cut(s)	78, 106, 149, 460, 768, 1029, 1205
BstDEI	CTNAG	5 cut(s)	275, 351, 507, 709, 997
BstDSI	CCRYGG	1 cut(s)	847
BstF5I	GGATG	6 cut(s)	108, 229, 483, 567, 812, 990
BstFNI	CGCG	1 cut(s)	1384
BstH2I	RGCGCY	2 cut(s)	293, 459
BstHHI	GCGC	5 cut(s)	88, 292, 458, 837, 1384
BstKTI	GATC	7 cut(s)	136, 229, 390, 526, 1295, 1314, 1366
BstMAI	GTCTC	4 cut(s)	319, 579, 641, 680
BstMBI	GATC	7 cut(s)	133, 226, 387, 523, 1292, 1311, 1363
BstMCI	CGRYCG	1 cut(s)	1302
BstMWI	GCNNNNNNNGC	9 cut(s)	10, 105, 298, 453, 462, 1124, 1181, 1204, 1379
BstNI	CCWGG	3 cut(s)	311, 558, 1115
BstNSI	RCATGY	1 cut(s)	770
BstSCI	CCNGG	4 cut(s)	309, 556, 621, 1113
BstSFI	CTRYAG	2 cut(s)	345, 1128
BstUI	CGCG	1 cut(s)	1384
BstV1I	GCAGC	5 cut(s)	100, 342, 359, 474, 498
BstV2I	GAAGAC	1 cut(s)	849
BstXI	CCANNNNNNTGG	1 cut(s)	881
Bsu36I	CCTNAGG	1 cut(s)	275
BsuRI	GGCC	5 cut(s)	60, 216, 1118, 1184, 1207
BtgI	CCRYGG	1 cut(s)	847
BtrI	CACGTC	2 cut(s)	115, 270
BtsCI	GGATG	6 cut(s)	108, 229, 483, 567, 812, 990
BtsIMutI	CAGTG	2 cut(s)	1166, 1365
Cac8I	GCNNGC	7 cut(s)	78, 106, 149, 460, 768, 1029, 1205
CaiI	CAGNNNCTG	1 cut(s)	468
CciI	TCATGA	2 cut(s)	321, 526
CfoI	GCGC	5 cut(s)	88, 292, 458, 837, 1384
Cfr10I	RCCGGY	1 cut(s)	104
Cfr13I	GGNCC	8 cut(s)	279, 616, 758, 972, 1111, 1117, 1182, 1206
Csp6I	GTAC	3 cut(s)	32, 608, 1065
CspCI	CAANNNNNGTGG	4 cut(s)	390, 425, 1341, 1376
CviQI	GTAC	3 cut(s)	32, 608, 1065
DdeI	CTNAG	5 cut(s)	275, 351, 507, 709, 997
DinI	GGCGCC	1 cut(s)	291
DpnI	GATC	7 cut(s)	135, 228, 389, 525, 1294, 1313, 1365
DpnII	GATC	7 cut(s)	133, 226, 387, 523, 1292, 1311, 1363
Eam1104I	CTCTTC	4 cut(s)	577, 639, 1101, 1414
EarI	CTCTTC	4 cut(s)	577, 639, 1101, 1414
EciI	GGCGGA	2 cut(s)	428, 808
Ecl136II	GAGCTC	1 cut(s)	13
Eco130I	CCWWGG	1 cut(s)	81
Eco24I	GRGCYC	2 cut(s)	15, 1099
Eco31I	GGTCTC	3 cut(s)	319, 579, 641
Eco47I	GGWCC	5 cut(s)	279, 616, 758, 972, 1111
Eco47III	AGCGCT	1 cut(s)	457
Eco53kI	GAGCTC	1 cut(s)	13
Eco72I	CACGTG	2 cut(s)	929, 1284
Eco81I	CCTNAGG	1 cut(s)	275
Eco88I	CYCGRG	1 cut(s)	663
EcoICRI	GAGCTC	1 cut(s)	13
EcoO109I	RGGNCCY	2 cut(s)	972, 1111
EcoRI	GAATTC	2 cut(s)	426, 1159
EcoRII	CCWGG	3 cut(s)	309, 556, 1113
EcoT14I	CCWWGG	1 cut(s)	81
EcoT22I	ATGCAT	1 cut(s)	485
EcoT38I	GRGCYC	2 cut(s)	15, 1099
EgeI	GGCGCC	1 cut(s)	291
EheI	GGCGCC	1 cut(s)	291
ErhI	CCWWGG	1 cut(s)	81
FalI	AAGNNNNNCTT	2 cut(s)	1393, 1425
FaqI	GGGAC	3 cut(s)	256, 958, 1175
FauI	CCCGC	1 cut(s)	1145
FbaI	TGATCA	1 cut(s)	1311
Fnu4HI	GCNGC	9 cut(s)	89, 293, 348, 356, 463, 512, 550, 822, 825
FokI	GGATG	6 cut(s)	95, 216, 470, 574, 799, 977
FriOI	GRGCYC	2 cut(s)	15, 1099
Fsp4HI	GCNGC	9 cut(s)	89, 293, 348, 356, 463, 512, 550, 822, 825
FspBI	CTAG	4 cut(s)	77, 672, 941, 1214
GlaI	GCGC	5 cut(s)	87, 291, 457, 836, 1383
GluI	GCNGC	9 cut(s)	89, 293, 348, 356, 463, 512, 550, 822, 825
GsaI	CCCAGC	2 cut(s)	53, 1049
GsuI	CTGGAG	2 cut(s)	1190, 1445
HaeII	RGCGCY	2 cut(s)	293, 459
HaeIII	GGCC	5 cut(s)	60, 216, 1118, 1184, 1207
HapII	CCGG	3 cut(s)	105, 623, 1185
HhaI	GCGC	5 cut(s)	88, 292, 458, 837, 1384
Hin1I	GRCGYC	2 cut(s)	290, 336
Hin6I	GCGC	5 cut(s)	86, 290, 456, 835, 1382
HinP1I	GCGC	5 cut(s)	86, 290, 456, 835, 1382
HinfI	GANTC	5 cut(s)	180, 704, 869, 1033, 1188
HpaII	CCGG	3 cut(s)	105, 623, 1185
HphI	GGTGA	6 cut(s)	109, 145, 928, 1025, 1343, 1357
Hpy166II	GTNNAC	1 cut(s)	793
Hpy188I	TCNGA	6 cut(s)	211, 226, 425, 758, 1000, 1143
Hpy188III	TCNNGA	7 cut(s)	322, 527, 732, 907, 1303, 1424, 1439
Hpy8I	GTNNAC	1 cut(s)	793
Hpy99I	CGWCG	5 cut(s)	215, 338, 341, 582, 1300
HpyAV	CCTTC	3 cut(s)	55, 130, 1013
HpyCH4III	ACNGT	2 cut(s)	848, 1300
HpyCH4IV	ACGT	7 cut(s)	30, 114, 269, 336, 928, 1038, 1283
HpyCH4V	TGCA	9 cut(s)	4, 301, 347, 462, 483, 603, 766, 855, 1373
HpyF10VI	GCNNNNNNNGC	9 cut(s)	10, 105, 298, 453, 462, 1124, 1181, 1204, 1379
HpyF3I	CTNAG	5 cut(s)	275, 351, 507, 709, 997
HpySE526I	ACGT	7 cut(s)	30, 114, 269, 336, 928, 1038, 1283
Hsp92I	GRCGYC	2 cut(s)	290, 336
HspAI	GCGC	5 cut(s)	86, 290, 456, 835, 1382
KasI	GGCGCC	1 cut(s)	289
KflI	GGGWCCC	1 cut(s)	972
KroI	GCCGGC	1 cut(s)	104
KroNI	GCCGGC	1 cut(s)	106
Ksp22I	TGATCA	1 cut(s)	1311
Kzo9I	GATC	7 cut(s)	133, 226, 387, 523, 1292, 1311, 1363
LguI	GCTCTTC	1 cut(s)	1414
LmnI	GCTCC	5 cut(s)	10, 18, 242, 300, 1102
Lsp1109I	GCAGC	5 cut(s)	100, 342, 359, 474, 498
LweI	GCATC	3 cut(s)	117, 310, 492
MaeI	CTAG	4 cut(s)	77, 672, 941, 1214
MaeII	ACGT	7 cut(s)	30, 114, 269, 336, 928, 1038, 1283
MaeIII	GTNAC	5 cut(s)	115, 265, 473, 1034, 1039
MalI	GATC	7 cut(s)	135, 228, 389, 525, 1294, 1313, 1365
MbiI	CCGCTC	3 cut(s)	295, 549, 996
MboI	GATC	7 cut(s)	133, 226, 387, 523, 1292, 1311, 1363
MfeI	CAATTG	1 cut(s)	402
MhlI	GDGCHC	2 cut(s)	15, 1099
Mly113I	GGCGCC	1 cut(s)	290
MlyI	GAGTC	3 cut(s)	863, 1042, 1197
MmeI	TCCRAC	4 cut(s)	234, 403, 1035, 1225
Mph1103I	ATGCAT	1 cut(s)	485
MroNI	GCCGGC	1 cut(s)	104
MseI	TTAA	2 cut(s)	963, 1419
MspA1I	CMGCKG	3 cut(s)	355, 511, 1049
MspI	CCGG	3 cut(s)	105, 623, 1185
MspR9I	CCNGG	4 cut(s)	311, 558, 623, 1115
MunI	CAATTG	1 cut(s)	402
Mva1269I	GAATGC	2 cut(s)	552, 572
MvaI	CCWGG	3 cut(s)	311, 558, 1115
MvnI	CGCG	1 cut(s)	1384
MwoI	GCNNNNNNNGC	9 cut(s)	10, 105, 298, 453, 462, 1124, 1181, 1204, 1379
NaeI	GCCGGC	1 cut(s)	106
NarI	GGCGCC	1 cut(s)	290
NciI	CCSGG	1 cut(s)	623
NdeII	GATC	7 cut(s)	133, 226, 387, 523, 1292, 1311, 1363
NgoMIV	GCCGGC	1 cut(s)	104
NheI	GCTAGC	1 cut(s)	76
NlaIV	GGNNCC	5 cut(s)	291, 973, 974, 1098, 1208
NmuCI	GTSAC	3 cut(s)	115, 265, 1034
NsiI	ATGCAT	1 cut(s)	485
NspI	RCATGY	1 cut(s)	770
PaeI	GCATGC	1 cut(s)	770
PaeR7I	CTCGAG	1 cut(s)	663
PagI	TCATGA	2 cut(s)	321, 526
PciSI	GCTCTTC	1 cut(s)	1414
PcsI	WCGNNNNNNNCGW	1 cut(s)	429
PctI	GAATGC	2 cut(s)	552, 572
PdiI	GCCGGC	1 cut(s)	106
PfeI	GAWTC	2 cut(s)	180, 704
PflFI	GACNNNGTC	1 cut(s)	263
PkrI	GCNGC	9 cut(s)	90, 294, 349, 357, 464, 513, 551, 823, 826
PleI	GAGTC	3 cut(s)	863, 1041, 1196
PluTI	GGCGCC	1 cut(s)	293
PmaCI	CACGTG	2 cut(s)	929, 1284
PmlI	CACGTG	2 cut(s)	929, 1284
PpsI	GAGTC	3 cut(s)	863, 1041, 1196
Ppu21I	YACGTR	4 cut(s)	31, 929, 1039, 1284
PpuMI	RGGWCCY	2 cut(s)	972, 1111
Psp124BI	GAGCTC	1 cut(s)	15
Psp5II	RGGWCCY	2 cut(s)	972, 1111
Psp6I	CCWGG	3 cut(s)	309, 556, 1113
PspCI	CACGTG	2 cut(s)	929, 1284
PspFI	CCCAGC	2 cut(s)	49, 1045
PspGI	CCWGG	3 cut(s)	309, 556, 1113
PspN4I	GGNNCC	5 cut(s)	291, 973, 974, 1098, 1208
PspPI	GGNCC	8 cut(s)	279, 616, 758, 972, 1111, 1117, 1182, 1206
PspPPI	RGGWCCY	2 cut(s)	972, 1111
PspXI	VCTCGAGB	1 cut(s)	663
PstI	CTGCAG	1 cut(s)	349
PstNI	CAGNNNCTG	1 cut(s)	468
PsyI	GACNNNGTC	1 cut(s)	263
PvuII	CAGCTG	2 cut(s)	355, 511
RsaI	GTAC	3 cut(s)	33, 609, 1066
RsaNI	GTAC	3 cut(s)	32, 608, 1065
SacI	GAGCTC	1 cut(s)	15
SapI	GCTCTTC	1 cut(s)	1414
SaqAI	TTAA	2 cut(s)	963, 1419
SatI	GCNGC	9 cut(s)	89, 293, 348, 356, 463, 512, 550, 822, 825
Sau3AI	GATC	7 cut(s)	133, 226, 387, 523, 1292, 1311, 1363
Sau96I	GGNCC	8 cut(s)	279, 616, 758, 972, 1111, 1117, 1182, 1206
SchI	GAGTC	3 cut(s)	863, 1042, 1197
ScrFI	CCNGG	4 cut(s)	311, 558, 623, 1115
SduI	GDGCHC	2 cut(s)	15, 1099
SfaNI	GCATC	3 cut(s)	117, 310, 492
SfcI	CTRYAG	2 cut(s)	345, 1128
SfoI	GGCGCC	1 cut(s)	291
Sfr274I	CTCGAG	1 cut(s)	663
SinI	GGWCC	5 cut(s)	279, 616, 758, 972, 1111
SlaI	CTCGAG	1 cut(s)	663
SmlI	CTYRAG	2 cut(s)	663, 1444
SmoI	CTYRAG	2 cut(s)	663, 1444
SphI	GCATGC	1 cut(s)	770
SspDI	GGCGCC	1 cut(s)	289
SspMI	CTAG	4 cut(s)	77, 672, 941, 1214
SstI	GAGCTC	1 cut(s)	15
StyD4I	CCNGG	4 cut(s)	309, 556, 621, 1113
StyI	CCWWGG	1 cut(s)	81
TaaI	ACNGT	2 cut(s)	848, 1300
TaiI	ACGT	7 cut(s)	33, 117, 272, 339, 931, 1041, 1286
TaqI	TCGA	7 cut(s)	664, 702, 733, 1089, 1163, 1295, 1302
TauI	GCSGC	4 cut(s)	295, 552, 824, 827
TfiI	GAWTC	2 cut(s)	180, 704
Tru1I	TTAA	2 cut(s)	963, 1419
Tru9I	TTAA	2 cut(s)	963, 1419
TscAI	CASTG	2 cut(s)	1173, 1365
TseFI	GTSAC	3 cut(s)	115, 265, 1034
TseI	GCWGC	5 cut(s)	88, 347, 355, 462, 511
Tsp45I	GTSAC	3 cut(s)	115, 265, 1034
TspDTI	ATGAA	6 cut(s)	628, 1032, 1137, 1289, 1340, 1401
TspGWI	ACGGA	2 cut(s)	629, 969
TspRI	CASTG	2 cut(s)	1173, 1365
Tth111I	GACNNNGTC	1 cut(s)	263
VpaK11BI	GGWCC	5 cut(s)	279, 616, 758, 972, 1111
XapI	RAATTY	5 cut(s)	426, 744, 1159, 1430, 1450
XceI	RCATGY	1 cut(s)	770
XcmI	CCANNNNNNNNNTGG	3 cut(s)	79, 845, 1200
XhoI	CTCGAG	1 cut(s)	663
XspI	CTAG	4 cut(s)	77, 672, 941, 1214
ZraI	GACGTC	1 cut(s)	337
Zsp2I	ATGCAT	1 cut(s)	485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.