Xylem serine proteinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G03620 AT5G03620 |
| malus_domestica | MD12G1022400.v1.1 MD12G1022500.v1.1 MD14G1019300.v1.1 MD14G1019400.v1.1 |
| prunus_persica | Prupe.7G114300_v2.0.a1 Prupe.7G114300_v2.0.a1 |
| pyrus_communis | pycom14g01900 |
| rosa_chinensis | RchiOBHm_Chr3g0472671 RchiOBHm_Chr3g0472681 |
| rosa_laevigata | RLG00000016130 RLG00000024064 |
| rosa_multiflora | Rmu_sc0001616.1_g000054 Rmu_sc0003510.1_g000013 |
| rosa_roxburghii | Rroxscaffold_5G00353850 Rroxscaffold_6G00408720 Rroxscaffold_6G00408730 |
| rosa_rugosa | Rorug03G0127100 Rorug04G0092600 |
| rosa_samantha | Rh3AG179800 Rh3BG205700 Rh3CG202800 Rh3DG170000 Rh3DG170100 |
| rosa_wichuraiana | Rw3G016290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 2 cut(s) | 43, 170 |
| AluBI | AGCT | 2 cut(s) | 220, 266 |
| AluI | AGCT | 2 cut(s) | 220, 266 |
| BbsI | GAAGAC | 1 cut(s) | 101 |
| BmsI | GCATC | 1 cut(s) | 112 |
| BpiI | GAAGAC | 1 cut(s) | 101 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 150, 180 |
| Bse1I | ACTGG | 1 cut(s) | 179 |
| BseNI | ACTGG | 1 cut(s) | 179 |
| BseYI | CCCAGC | 1 cut(s) | 230 |
| Bsp143I | GATC | 1 cut(s) | 213 |
| BspHI | TCATGA | 1 cut(s) | 106 |
| BsrI | ACTGG | 1 cut(s) | 179 |
| BssMI | GATC | 1 cut(s) | 213 |
| Bst6I | CTCTTC | 1 cut(s) | 105 |
| BstKTI | GATC | 1 cut(s) | 216 |
| BstMBI | GATC | 1 cut(s) | 213 |
| BstV2I | GAAGAC | 1 cut(s) | 101 |
| BtgZI | GCGATG | 2 cut(s) | 84, 148 |
| BtsIMutI | CAGTG | 1 cut(s) | 172 |
| CciI | TCATGA | 1 cut(s) | 106 |
| CviAII | CATG | 2 cut(s) | 107, 258 |
| CviJI | RGCY | 2 cut(s) | 220, 266 |
| CviKI_1 | RGCY | 2 cut(s) | 220, 266 |
| DpnI | GATC | 1 cut(s) | 215 |
| DpnII | GATC | 1 cut(s) | 213 |
| Eam1104I | CTCTTC | 1 cut(s) | 105 |
| EarI | CTCTTC | 1 cut(s) | 105 |
| FaeI | CATG | 2 cut(s) | 110, 261 |
| FaiI | YATR | 5 cut(s) | 92, 108, 199, 259, 270 |
| FatI | CATG | 2 cut(s) | 106, 257 |
| GsaI | CCCAGC | 1 cut(s) | 234 |
| Hin1II | CATG | 2 cut(s) | 110, 261 |
| HindIII | AAGCTT | 2 cut(s) | 218, 264 |
| Hpy188III | TCNNGA | 2 cut(s) | 76, 107 |
| HpyCH4V | TGCA | 2 cut(s) | 47, 201 |
| Hsp92II | CATG | 2 cut(s) | 110, 261 |
| Kzo9I | GATC | 1 cut(s) | 213 |
| LpnPI | CCDG | 4 cut(s) | 33, 89, 160, 244 |
| LweI | GCATC | 1 cut(s) | 112 |
| MaeIII | GTNAC | 2 cut(s) | 32, 190 |
| MalI | GATC | 1 cut(s) | 215 |
| MboI | GATC | 1 cut(s) | 213 |
| MboII | GAAGA | 3 cut(s) | 106, 122, 237 |
| MluCI | AATT | 1 cut(s) | 236 |
| MnlI | CCTC | 1 cut(s) | 152 |
| NdeII | GATC | 1 cut(s) | 213 |
| NlaIII | CATG | 2 cut(s) | 110, 261 |
| PagI | TCATGA | 1 cut(s) | 106 |
| PspFI | CCCAGC | 1 cut(s) | 230 |
| Sau3AI | GATC | 1 cut(s) | 213 |
| SetI | ASST | 3 cut(s) | 132, 222, 268 |
| SfaNI | GCATC | 1 cut(s) | 112 |
| Sse9I | AATT | 1 cut(s) | 236 |
| TasI | AATT | 1 cut(s) | 236 |
| TscAI | CASTG | 1 cut(s) | 179 |
| TspDTI | ATGAA | 3 cut(s) | 45, 107, 123 |
| TspRI | CASTG | 1 cut(s) | 179 |