ATP-dependent RNA helicase SUPV3L1
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0159391 RchiOBHm_Chr3g0487301 |
| rosa_laevigata | RLG00000011507 RLG00000029402 |
| rosa_roxburghii | Rroxscaffold_4G00312630 Rroxscaffold_7G00166790 Rroxscaffold_7G00169590 Rroxscaffold_7G00206080 |
| rosa_rugosa | Rorug06G0002000 |
| rosa_samantha | Rh1AG200100 Rh1AG205000 Rh1AG242200 Rh1CG185000 Rh2BG555400 Rh3AG249400 Rh4AG107400 Rh4CG107100 Rh6AG218000 Rh6DG091600 Rh7CG262100 Rh7DG252700 |
| rosa_wichuraiana | Rw1G021230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 238 |
| AciI | CCGC | 3 cut(s) | 17, 54, 58 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 221, 238 |
| AluBI | AGCT | 3 cut(s) | 50, 107, 245 |
| AluI | AGCT | 3 cut(s) | 50, 107, 245 |
| ApeKI | GCWGC | 1 cut(s) | 104 |
| AsuHPI | GGTGA | 3 cut(s) | 30, 95, 132 |
| BbvI | GCAGC | 1 cut(s) | 116 |
| BccI | CCATC | 1 cut(s) | 151 |
| BisI | GCNGC | 1 cut(s) | 105 |
| BlsI | GCNGC | 1 cut(s) | 106 |
| BmsI | GCATC | 1 cut(s) | 91 |
| BpuEI | CTTGAG | 1 cut(s) | 176 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 221, 238 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 221, 238 |
| BseXI | GCAGC | 1 cut(s) | 116 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 221, 238 |
| Bsp143I | GATC | 2 cut(s) | 109, 184 |
| BspACI | CCGC | 3 cut(s) | 17, 54, 58 |
| BssMI | GATC | 2 cut(s) | 109, 184 |
| Bst6I | CTCTTC | 1 cut(s) | 123 |
| BstC8I | GCNNGC | 3 cut(s) | 6, 52, 56 |
| BstKTI | GATC | 2 cut(s) | 112, 187 |
| BstMBI | GATC | 2 cut(s) | 109, 184 |
| BstV1I | GCAGC | 1 cut(s) | 116 |
| BtsIMutI | CAGTG | 1 cut(s) | 131 |
| Cac8I | GCNNGC | 3 cut(s) | 6, 52, 56 |
| CviJI | RGCY | 5 cut(s) | 8, 50, 107, 225, 245 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 50, 107, 225, 245 |
| DpnI | GATC | 2 cut(s) | 111, 186 |
| DpnII | GATC | 2 cut(s) | 109, 184 |
| Eam1104I | CTCTTC | 1 cut(s) | 123 |
| EarI | CTCTTC | 1 cut(s) | 123 |
| FaiI | YATR | 5 cut(s) | 63, 149, 191, 195, 197 |
| FauI | CCCGC | 1 cut(s) | 47 |
| Fnu4HI | GCNGC | 1 cut(s) | 105 |
| Fsp4HI | GCNGC | 1 cut(s) | 105 |
| GluI | GCNGC | 1 cut(s) | 105 |
| HinfI | GANTC | 2 cut(s) | 65, 151 |
| HphI | GGTGA | 3 cut(s) | 30, 95, 132 |
| Hpy188III | TCNNGA | 2 cut(s) | 155, 165 |
| HpyCH4IV | ACGT | 1 cut(s) | 205 |
| HpyCH4V | TGCA | 1 cut(s) | 104 |
| HpySE526I | ACGT | 1 cut(s) | 205 |
| Kzo9I | GATC | 2 cut(s) | 109, 184 |
| LpnPI | CCDG | 4 cut(s) | 36, 150, 245, 245 |
| Lsp1109I | GCAGC | 1 cut(s) | 116 |
| LweI | GCATC | 1 cut(s) | 91 |
| MaeII | ACGT | 1 cut(s) | 205 |
| MaeIII | GTNAC | 1 cut(s) | 88 |
| MalI | GATC | 2 cut(s) | 111, 186 |
| MboI | GATC | 2 cut(s) | 109, 184 |
| MboII | GAAGA | 2 cut(s) | 110, 113 |
| MlyI | GAGTC | 1 cut(s) | 145 |
| MnlI | CCTC | 4 cut(s) | 22, 126, 153, 215 |
| MspA1I | CMGCKG | 1 cut(s) | 107 |
| NdeII | GATC | 2 cut(s) | 109, 184 |
| NmuCI | GTSAC | 1 cut(s) | 88 |
| PfeI | GAWTC | 1 cut(s) | 65 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 238 |
| PkrI | GCNGC | 1 cut(s) | 106 |
| PleI | GAGTC | 1 cut(s) | 145 |
| PpsI | GAGTC | 1 cut(s) | 145 |
| PvuII | CAGCTG | 1 cut(s) | 107 |
| SatI | GCNGC | 1 cut(s) | 105 |
| Sau3AI | GATC | 2 cut(s) | 109, 184 |
| SchI | GAGTC | 1 cut(s) | 145 |
| SetI | ASST | 8 cut(s) | 52, 74, 109, 164, 182, 208, 247, 264 |
| SfaNI | GCATC | 1 cut(s) | 91 |
| SmlI | CTYRAG | 1 cut(s) | 155 |
| SmoI | CTYRAG | 1 cut(s) | 155 |
| SsiI | CCGC | 3 cut(s) | 17, 54, 58 |
| TaiI | ACGT | 1 cut(s) | 208 |
| TfiI | GAWTC | 1 cut(s) | 65 |
| TscAI | CASTG | 1 cut(s) | 138 |
| TseFI | GTSAC | 1 cut(s) | 88 |
| TseI | GCWGC | 1 cut(s) | 104 |
| Tsp45I | GTSAC | 1 cut(s) | 88 |
| TspDTI | ATGAA | 2 cut(s) | 78, 113 |
| TspRI | CASTG | 1 cut(s) | 138 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 238 |