RLG00000029402

N-acetyl-D-glucosamine kinase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0009737
Physical Location & Seq
Forward (+)
38148688 .. 38149131
444 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029402

Sequence Viewer

Length: 327 bp
ATGAATCGCTACAGGAACAAAGAAATCTGGGATTTTGAGCAACAAATGCCGGTTTCCGACGCTGCCCGAGACGTTATTCTCAGGTTGGATGGTGATTGCCTCACACATGGTGTCTTGCGCCTCCCATATCATCTTCTCGAACCGTGCTCAGACGGAGGTCGGCGACGACGACTCGCCGATGAAAGAGTCATGCTTTTCCGTCTCCGGCATCTCTTTCTCGATGACGGCGCATTGCAGAGTGAGGCTGCTTCTCTCAAGGTTGGTAAGAGGCTTGAAAATGCAGGGAAGCTTATCACGATTTTTGCATATGAAATCACACCTGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BcrAD_BadFG

Protein Analysis

109

Amino Acids

12.44

Weight (kDa)

7.83

Isoelectric Point (pI)

58.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AdeI CACNNNGTG 1 cut(s) 110
AgsI TTSAA 1 cut(s) 275
AjnI CCWGG 1 cut(s) 319
AluBI AGCT 1 cut(s) 289
AluI AGCT 1 cut(s) 289
Alw21I GWGCWC 1 cut(s) 149
Alw26I GTCTC 2 cut(s) 63, 206
Ama87I CYCGRG 1 cut(s) 66
ApeKI GCWGC 2 cut(s) 62, 245
AspLEI GCGC 2 cut(s) 120, 230
AsuHPI GGTGA 1 cut(s) 104
AvaI CYCGRG 1 cut(s) 66
Bbv12I GWGCWC 1 cut(s) 149
BbvI GCAGC 2 cut(s) 49, 232
BccI CCATC 1 cut(s) 83
BceAI ACGGC 1 cut(s) 241
BciT130I CCWGG 1 cut(s) 321
BcoDI GTCTC 2 cut(s) 63, 206
BfmI CTRYAG 1 cut(s) 10
BisI GCNGC 2 cut(s) 63, 246
BlsI GCNGC 2 cut(s) 64, 247
Bme1390I CCNGG 1 cut(s) 321
BmeT110I CYCGRG 1 cut(s) 66
BmrFI CCNGG 1 cut(s) 321
BmsI GCATC 1 cut(s) 217
BoxI GACNNNNGTC 1 cut(s) 156
BpuEI CTTGAG 1 cut(s) 239
Bse118I RCCGGY 1 cut(s) 49
Bse3DI GCAATG 1 cut(s) 230
BseBI CCWGG 1 cut(s) 321
BseGI GGATG 1 cut(s) 94
BseMI GCAATG 1 cut(s) 230
BseMII CTCAG 2 cut(s) 94, 162
BseXI GCAGC 2 cut(s) 49, 232
BsiHKAI GWGCWC 1 cut(s) 149
BsiHKCI CYCGRG 1 cut(s) 66
BsiSI CCGG 2 cut(s) 50, 205
BsmAI GTCTC 2 cut(s) 63, 206
BsmBI CGTCTC 2 cut(s) 63, 206
BsoBI CYCGRG 1 cut(s) 66
Bsp1286I GDGCHC 1 cut(s) 149
BspCNI CTCAG 2 cut(s) 93, 161
BsrDI GCAATG 1 cut(s) 230
BsrFI RCCGGY 1 cut(s) 49
BssAI RCCGGY 1 cut(s) 49
Bst2UI CCWGG 1 cut(s) 321
Bst4CI ACNGT 1 cut(s) 144
BstAPI GCANNNNNTGC 1 cut(s) 46
BstDEI CTNAG 2 cut(s) 80, 148
BstF5I GGATG 1 cut(s) 94
BstHHI GCGC 2 cut(s) 120, 230
BstMAI GTCTC 2 cut(s) 63, 206
BstMWI GCNNNNNNNGC 1 cut(s) 46
BstNI CCWGG 1 cut(s) 321
BstPAI GACNNNNGTC 1 cut(s) 156
BstSCI CCNGG 1 cut(s) 319
BstSFI CTRYAG 1 cut(s) 10
BstV1I GCAGC 2 cut(s) 49, 232
BtsCI GGATG 1 cut(s) 94
CfoI GCGC 2 cut(s) 120, 230
Cfr10I RCCGGY 1 cut(s) 49
CseI GACGC 1 cut(s) 68
CsiI ACCWGGT 1 cut(s) 319
CviAII CATG 2 cut(s) 107, 190
CviJI RGCY 3 cut(s) 245, 271, 289
CviKI_1 RGCY 3 cut(s) 245, 271, 289
DdeI CTNAG 2 cut(s) 80, 148
DraIII CACNNNGTG 1 cut(s) 110
Eco88I CYCGRG 1 cut(s) 66
EcoRII CCWGG 1 cut(s) 319
Esp3I CGTCTC 2 cut(s) 63, 206
FaeI CATG 2 cut(s) 110, 193
FaiI YATR 5 cut(s) 108, 127, 191, 307, 309
FatI CATG 2 cut(s) 106, 189
FauNDI CATATG 1 cut(s) 307
Fnu4HI GCNGC 2 cut(s) 63, 246
FokI GGATG 1 cut(s) 101
Fsp4HI GCNGC 2 cut(s) 63, 246
GlaI GCGC 2 cut(s) 119, 229
GluI GCNGC 2 cut(s) 63, 246
HapII CCGG 2 cut(s) 50, 205
HgaI GACGC 1 cut(s) 68
HhaI GCGC 2 cut(s) 120, 230
Hin1II CATG 2 cut(s) 110, 193
Hin6I GCGC 2 cut(s) 118, 228
HinP1I GCGC 2 cut(s) 118, 228
HindIII AAGCTT 1 cut(s) 287
HinfI GANTC 3 cut(s) 4, 171, 186
HpaII CCGG 2 cut(s) 50, 205
HphI GGTGA 1 cut(s) 104
Hpy188I TCNGA 2 cut(s) 58, 151
Hpy188III TCNNGA 3 cut(s) 137, 218, 295
Hpy99I CGWCG 3 cut(s) 62, 168, 171
HpyCH4III ACNGT 1 cut(s) 144
HpyCH4IV ACGT 1 cut(s) 72
HpyCH4V TGCA 3 cut(s) 235, 281, 305
HpyF10VI GCNNNNNNNGC 1 cut(s) 46
HpyF3I CTNAG 2 cut(s) 80, 148
HpySE526I ACGT 1 cut(s) 72
Hsp92II CATG 2 cut(s) 110, 193
HspAI GCGC 2 cut(s) 118, 228
LpnPI CCDG 6 cut(s) 13, 63, 67, 218, 267, 306
Lsp1109I GCAGC 2 cut(s) 49, 232
LweI GCATC 1 cut(s) 217
MabI ACCWGGT 1 cut(s) 319
MaeII ACGT 1 cut(s) 72
MboII GAAGA 1 cut(s) 125
MhlI GDGCHC 1 cut(s) 149
MlyI GAGTC 2 cut(s) 165, 195
MmeI TCCRAC 2 cut(s) 66, 81
MnlI CCTC 5 cut(s) 110, 131, 149, 235, 261
MspI CCGG 2 cut(s) 50, 205
MspR9I CCNGG 1 cut(s) 321
MvaI CCWGG 1 cut(s) 321
MwoI GCNNNNNNNGC 1 cut(s) 46
NdeI CATATG 1 cut(s) 307
NlaIII CATG 2 cut(s) 110, 193
PcsI WCGNNNNNNNCGW 1 cut(s) 166
PfeI GAWTC 1 cut(s) 4
PkrI GCNGC 2 cut(s) 64, 247
PleI GAGTC 2 cut(s) 165, 194
PpsI GAGTC 2 cut(s) 165, 194
PshAI GACNNNNGTC 1 cut(s) 156
Psp6I CCWGG 1 cut(s) 319
PspGI CCWGG 1 cut(s) 319
SatI GCNGC 2 cut(s) 63, 246
SchI GAGTC 2 cut(s) 165, 195
ScrFI CCNGG 1 cut(s) 321
SduI GDGCHC 1 cut(s) 149
SetI ASST 6 cut(s) 75, 86, 160, 261, 291, 322
SexAI ACCWGGT 1 cut(s) 319
SfaNI GCATC 1 cut(s) 217
SfcI CTRYAG 1 cut(s) 10
SmlI CTYRAG 1 cut(s) 254
SmoI CTYRAG 1 cut(s) 254
StyD4I CCNGG 1 cut(s) 319
TaaI ACNGT 1 cut(s) 144
TaiI ACGT 1 cut(s) 75
TaqI TCGA 2 cut(s) 138, 219
TfiI GAWTC 1 cut(s) 4
TseI GCWGC 2 cut(s) 62, 245
TspDTI ATGAA 3 cut(s) 17, 195, 324
TspGWI ACGGA 2 cut(s) 168, 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.