ubiquitin-60S ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G36170 AT3G52590 |
| fragaria_vesca | FvH4_6g19302 FvH4_6g19302 FvH4_7g32551 |
| malus_domestica | MD01G1226400.v1.1 MD07G1296800.v1.1 MD12G1028600.v1.1 MD14G1028800.v1.1 |
| prunus_persica | Prupe.2G316400_v2.0.a1 Prupe.7G102800_v2.0.a1 |
| pyrus_communis | pycom01g23500 pycom07g26950 pycom12g02740 pycom14g02690 |
| rosa_chinensis | RchiOBHm_Chr1g0336321 RchiOBHm_Chr1g0382401 RchiOBHm_Chr2g0129851 RchiOBHm_Chr2g0148571 RchiOBHm_Chr2g0162391 RchiOBHm_Chr3g0474431 RchiOBHm_Chr3g0474471 RchiOBHm_Chr3g0485451 RchiOBHm_Chr4g0402971 |
| rosa_multiflora | Rmu_sc0000048.1_g000015 Rmu_sc0009916.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00002380 Rroxscaffold_4G00278130 |
| rosa_rugosa | Rorug01G0434100 Rorug03G0140900 |
| rosa_samantha | Rh1AG458800 Rh1BG415100 Rh1CG429200 Rh1DG447200 Rh2BG576000 Rh3AG191600 Rh3AG267800 Rh3BG221100 Rh3BG221300 Rh4CG124000 |
| rosa_wichuraiana | Rw1G041220 Rw3G017490 Rw6G010860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 264 |
| AccII | CGCG | 1 cut(s) | 113 |
| AciI | CCGC | 2 cut(s) | 166, 192 |
| AgsI | TTSAA | 1 cut(s) | 332 |
| AluBI | AGCT | 2 cut(s) | 25, 235 |
| AluI | AGCT | 2 cut(s) | 25, 235 |
| Ama87I | CYCGRG | 1 cut(s) | 26 |
| ApeKI | GCWGC | 1 cut(s) | 22 |
| AspLEI | GCGC | 1 cut(s) | 115 |
| AvaI | CYCGRG | 1 cut(s) | 26 |
| BbvI | GCAGC | 1 cut(s) | 34 |
| BclI | TGATCA | 1 cut(s) | 34 |
| BfaI | CTAG | 2 cut(s) | 135, 236 |
| BfmI | CTRYAG | 1 cut(s) | 205 |
| BisI | GCNGC | 2 cut(s) | 23, 166 |
| BlsI | GCNGC | 2 cut(s) | 24, 167 |
| BmeT110I | CYCGRG | 1 cut(s) | 26 |
| Bse3DI | GCAATG | 1 cut(s) | 187 |
| BseGI | GGATG | 1 cut(s) | 37 |
| BseMI | GCAATG | 1 cut(s) | 187 |
| BseMII | CTCAG | 1 cut(s) | 80 |
| BseXI | GCAGC | 1 cut(s) | 34 |
| Bsh1236I | CGCG | 1 cut(s) | 113 |
| BsiHKCI | CYCGRG | 1 cut(s) | 26 |
| BsmI | GAATGC | 1 cut(s) | 291 |
| BsoBI | CYCGRG | 1 cut(s) | 26 |
| Bsp143I | GATC | 4 cut(s) | 34, 159, 256, 322 |
| BspACI | CCGC | 2 cut(s) | 166, 192 |
| BspCNI | CTCAG | 1 cut(s) | 81 |
| BspFNI | CGCG | 1 cut(s) | 113 |
| BsrDI | GCAATG | 1 cut(s) | 187 |
| BssMI | GATC | 4 cut(s) | 34, 159, 256, 322 |
| Bst4CI | ACNGT | 1 cut(s) | 206 |
| BstDEI | CTNAG | 1 cut(s) | 89 |
| BstF5I | GGATG | 1 cut(s) | 37 |
| BstFNI | CGCG | 1 cut(s) | 113 |
| BstHHI | GCGC | 1 cut(s) | 115 |
| BstKTI | GATC | 4 cut(s) | 37, 162, 259, 325 |
| BstMBI | GATC | 4 cut(s) | 34, 159, 256, 322 |
| BstSFI | CTRYAG | 1 cut(s) | 205 |
| BstUI | CGCG | 1 cut(s) | 113 |
| BstV1I | GCAGC | 1 cut(s) | 34 |
| BtsCI | GGATG | 1 cut(s) | 37 |
| CfoI | GCGC | 1 cut(s) | 115 |
| CviAII | CATG | 2 cut(s) | 124, 291 |
| CviJI | RGCY | 4 cut(s) | 25, 94, 235, 311 |
| CviKI_1 | RGCY | 4 cut(s) | 25, 94, 235, 311 |
| DdeI | CTNAG | 1 cut(s) | 89 |
| DpnI | GATC | 4 cut(s) | 36, 161, 258, 324 |
| DpnII | GATC | 4 cut(s) | 34, 159, 256, 322 |
| Eco88I | CYCGRG | 1 cut(s) | 26 |
| FaeI | CATG | 2 cut(s) | 127, 294 |
| FaiI | YATR | 5 cut(s) | 39, 125, 144, 177, 292 |
| FatI | CATG | 2 cut(s) | 123, 290 |
| FbaI | TGATCA | 1 cut(s) | 34 |
| FblI | GTMKAC | 1 cut(s) | 264 |
| Fnu4HI | GCNGC | 2 cut(s) | 23, 166 |
| FokI | GGATG | 1 cut(s) | 44 |
| Fsp4HI | GCNGC | 2 cut(s) | 23, 166 |
| FspBI | CTAG | 2 cut(s) | 135, 236 |
| GlaI | GCGC | 1 cut(s) | 114 |
| GluI | GCNGC | 2 cut(s) | 23, 166 |
| HhaI | GCGC | 1 cut(s) | 115 |
| Hin1II | CATG | 2 cut(s) | 127, 294 |
| Hin6I | GCGC | 1 cut(s) | 113 |
| HinP1I | GCGC | 1 cut(s) | 113 |
| HincII | GTYRAC | 1 cut(s) | 202 |
| HindII | GTYRAC | 1 cut(s) | 202 |
| HinfI | GANTC | 2 cut(s) | 68, 85 |
| Hpy166II | GTNNAC | 3 cut(s) | 202, 221, 265 |
| Hpy188I | TCNGA | 3 cut(s) | 17, 63, 90 |
| Hpy8I | GTNNAC | 3 cut(s) | 202, 221, 265 |
| HpyAV | CCTTC | 2 cut(s) | 126, 194 |
| HpyCH4III | ACNGT | 1 cut(s) | 206 |
| HpyCH4V | TGCA | 3 cut(s) | 79, 179, 317 |
| HpyF3I | CTNAG | 1 cut(s) | 89 |
| Hsp92II | CATG | 2 cut(s) | 127, 294 |
| HspAI | GCGC | 1 cut(s) | 113 |
| Ksp22I | TGATCA | 1 cut(s) | 34 |
| Kzo9I | GATC | 4 cut(s) | 34, 159, 256, 322 |
| LpnPI | CCDG | 2 cut(s) | 57, 245 |
| Lsp1109I | GCAGC | 1 cut(s) | 34 |
| MaeI | CTAG | 2 cut(s) | 135, 236 |
| MalI | GATC | 4 cut(s) | 36, 161, 258, 324 |
| MboI | GATC | 4 cut(s) | 34, 159, 256, 322 |
| MboII | GAAGA | 4 cut(s) | 166, 223, 263, 266 |
| MluCI | AATT | 3 cut(s) | 49, 332, 337 |
| MnlI | CCTC | 3 cut(s) | 22, 84, 235 |
| MseI | TTAA | 2 cut(s) | 335, 340 |
| MslI | CAYNNNNRTG | 1 cut(s) | 192 |
| Mva1269I | GAATGC | 1 cut(s) | 291 |
| MvnI | CGCG | 1 cut(s) | 113 |
| NdeII | GATC | 4 cut(s) | 34, 159, 256, 322 |
| NlaIII | CATG | 2 cut(s) | 127, 294 |
| PaeR7I | CTCGAG | 1 cut(s) | 26 |
| PctI | GAATGC | 1 cut(s) | 291 |
| PfeI | GAWTC | 2 cut(s) | 68, 85 |
| PkrI | GCNGC | 2 cut(s) | 24, 167 |
| PspXI | VCTCGAGB | 1 cut(s) | 26 |
| RseI | CAYNNNNRTG | 1 cut(s) | 192 |
| SaqAI | TTAA | 2 cut(s) | 335, 340 |
| SatI | GCNGC | 2 cut(s) | 23, 166 |
| Sau3AI | GATC | 4 cut(s) | 34, 159, 256, 322 |
| SetI | ASST | 2 cut(s) | 27, 237 |
| SfcI | CTRYAG | 1 cut(s) | 205 |
| Sfr274I | CTCGAG | 1 cut(s) | 26 |
| SlaI | CTCGAG | 1 cut(s) | 26 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 192 |
| SmlI | CTYRAG | 1 cut(s) | 26 |
| SmoI | CTYRAG | 1 cut(s) | 26 |
| Sse9I | AATT | 3 cut(s) | 49, 332, 337 |
| SsiI | CCGC | 2 cut(s) | 166, 192 |
| SspMI | CTAG | 2 cut(s) | 135, 236 |
| TaaI | ACNGT | 1 cut(s) | 206 |
| TaqI | TCGA | 1 cut(s) | 27 |
| TasI | AATT | 3 cut(s) | 49, 332, 337 |
| TauI | GCSGC | 1 cut(s) | 168 |
| TfiI | GAWTC | 2 cut(s) | 68, 85 |
| Tru1I | TTAA | 2 cut(s) | 335, 340 |
| Tru9I | TTAA | 2 cut(s) | 335, 340 |
| TseI | GCWGC | 1 cut(s) | 22 |
| TspDTI | ATGAA | 1 cut(s) | 176 |
| XhoI | CTCGAG | 1 cut(s) | 26 |
| XmiI | GTMKAC | 1 cut(s) | 264 |
| XspI | CTAG | 2 cut(s) | 135, 236 |