RchiOBHm_Chr5g0068551

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
74507413 .. 74508969
1557 bp
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UTR
Exon/CDS
Intron
PRQ34399

Sequence Viewer

Length: 159 bp
ATGTTCTTCTTGGTCGAACAAGGCAAAGGTAGATCTTGGGTTGCGAAAGCAATACTCCTGCCTTTGACTTTTCAGGGGAAACTTTGCATCTCATCGTGGTGTGGCAATCCAAGCCTCTGGACTCCCAACATTGCTTTCGTTTTGGTGCCTTTGGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

52

Amino Acids

5.78

Weight (kDa)

9.38

Isoelectric Point (pI)

42.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 145
AjuI GAANNNNNNNTTGG 2 cut(s) 119, 151
BanI GGYRCC 1 cut(s) 145
BglII AGATCT 1 cut(s) 32
BmiI GGNNCC 1 cut(s) 147
BmsI GCATC 1 cut(s) 96
Bse3DI GCAATG 1 cut(s) 129
BseMI GCAATG 1 cut(s) 129
BshNI GGYRCC 1 cut(s) 145
Bsp143I GATC 1 cut(s) 32
BspLI GGNNCC 1 cut(s) 147
BspT107I GGYRCC 1 cut(s) 145
BsrDI GCAATG 1 cut(s) 129
BssMI GATC 1 cut(s) 32
BstKTI GATC 1 cut(s) 35
BstMBI GATC 1 cut(s) 32
BstMWI GCNNNNNNNGC 1 cut(s) 111
BstX2I RGATCY 1 cut(s) 32
BstXI CCANNNNNNTGG 1 cut(s) 117
BstYI RGATCY 1 cut(s) 32
CviJI RGCY 1 cut(s) 114
CviKI_1 RGCY 1 cut(s) 114
DpnI GATC 1 cut(s) 34
DpnII GATC 1 cut(s) 32
HinfI GANTC 1 cut(s) 121
Hpy188I TCNGA 1 cut(s) 158
Hpy188III TCNNGA 1 cut(s) 118
HpyCH4V TGCA 1 cut(s) 87
HpyF10VI GCNNNNNNNGC 1 cut(s) 111
Kzo9I GATC 1 cut(s) 32
LpnPI CCDG 3 cut(s) 59, 71, 103
LweI GCATC 1 cut(s) 96
MalI GATC 1 cut(s) 34
MboI GATC 1 cut(s) 32
MflI RGATCY 1 cut(s) 32
MlyI GAGTC 1 cut(s) 115
MnlI CCTC 1 cut(s) 125
MslI CAYNNNNRTG 1 cut(s) 97
MwoI GCNNNNNNNGC 1 cut(s) 111
NdeII GATC 1 cut(s) 32
NlaIV GGNNCC 1 cut(s) 147
PleI GAGTC 1 cut(s) 115
PpsI GAGTC 1 cut(s) 115
PspN4I GGNNCC 1 cut(s) 147
PsuI RGATCY 1 cut(s) 32
RseI CAYNNNNRTG 1 cut(s) 97
Sau3AI GATC 1 cut(s) 32
SchI GAGTC 1 cut(s) 115
SetI ASST 1 cut(s) 31
SfaNI GCATC 1 cut(s) 96
SgeI CNNG 8 cut(s) 22, 32, 48, 70, 86, 108, 123, 130
SmiMI CAYNNNNRTG 1 cut(s) 97
TaqI TCGA 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.