Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0462941 RchiOBHm_Chr3g0497371 RchiOBHm_Chr5g0068551 |
| rosa_laevigata | RLG00000018025 |
| rosa_multiflora | Rmu_ssc0000018.1_g000016 |
| rosa_roxburghii | Rroxscaffold_3G00227890 Rroxscaffold_5G00363750 Rroxscaffold_6G00404310 Rroxscaffold_7G00199570 |
| rosa_rugosa | Rorug04G0017900 |
| rosa_samantha | Rh1CG043600 Rh3AG194500 Rh3AG336200 Rh3CG219300 Rh4AG095700 Rh4AG391800 Rh4BG093200 Rh4BG110900 Rh4DG088100 Rh4DG099000 Rh7BG391700 Rh7DG420900 |
| rosa_wichuraiana | Rw1G003500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 94 |
| AatII | GACGTC | 1 cut(s) | 92 |
| AccBSI | CCGCTC | 1 cut(s) | 235 |
| AccI | GTMKAC | 1 cut(s) | 172 |
| AciI | CCGC | 3 cut(s) | 140, 235, 241 |
| AcuI | CTGAAG | 2 cut(s) | 147, 224 |
| AcyI | GRCGYC | 1 cut(s) | 89 |
| AfaI | GTAC | 2 cut(s) | 35, 134 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 78 |
| AluBI | AGCT | 1 cut(s) | 158 |
| AluI | AGCT | 1 cut(s) | 158 |
| Alw26I | GTCTC | 1 cut(s) | 79 |
| ApeKI | GCWGC | 2 cut(s) | 16, 117 |
| AspS9I | GGNCC | 1 cut(s) | 261 |
| AsuHPI | GGTGA | 1 cut(s) | 84 |
| AvaII | GGWCC | 1 cut(s) | 261 |
| BbvI | GCAGC | 2 cut(s) | 28, 104 |
| BccI | CCATC | 1 cut(s) | 78 |
| BceAI | ACGGC | 2 cut(s) | 4, 95 |
| BciVI | GTATCC | 1 cut(s) | 136 |
| BclI | TGATCA | 1 cut(s) | 178 |
| BcoDI | GTCTC | 1 cut(s) | 79 |
| BfuI | GTATCC | 1 cut(s) | 136 |
| BisI | GCNGC | 3 cut(s) | 17, 118, 242 |
| BlsI | GCNGC | 3 cut(s) | 18, 119, 243 |
| BmcAI | AGTACT | 1 cut(s) | 134 |
| Bme18I | GGWCC | 1 cut(s) | 261 |
| BmgT120I | GGNCC | 1 cut(s) | 261 |
| BmsI | GCATC | 1 cut(s) | 198 |
| BsaHI | GRCGYC | 1 cut(s) | 89 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 78 |
| Bse3DI | GCAATG | 1 cut(s) | 127 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 78 |
| BseMI | GCAATG | 1 cut(s) | 127 |
| BseRI | GAGGAG | 1 cut(s) | 58 |
| BseXI | GCAGC | 2 cut(s) | 28, 104 |
| BsgI | GTGCAG | 1 cut(s) | 35 |
| BslFI | GGGAC | 1 cut(s) | 82 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 78 |
| BsmAI | GTCTC | 1 cut(s) | 79 |
| BsmBI | CGTCTC | 1 cut(s) | 79 |
| BsmFI | GGGAC | 1 cut(s) | 82 |
| Bsp143I | GATC | 3 cut(s) | 50, 178, 196 |
| BspACI | CCGC | 3 cut(s) | 140, 235, 241 |
| BsrBI | CCGCTC | 1 cut(s) | 235 |
| BsrDI | GCAATG | 1 cut(s) | 127 |
| BssMI | GATC | 3 cut(s) | 50, 178, 196 |
| BssNI | GRCGYC | 1 cut(s) | 89 |
| Bst4CI | ACNGT | 1 cut(s) | 96 |
| Bst6I | CTCTTC | 1 cut(s) | 123 |
| BstACI | GRCGYC | 1 cut(s) | 89 |
| BstKTI | GATC | 3 cut(s) | 53, 181, 199 |
| BstMAI | GTCTC | 1 cut(s) | 79 |
| BstMBI | GATC | 3 cut(s) | 50, 178, 196 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 114, 241 |
| BstV1I | GCAGC | 2 cut(s) | 28, 104 |
| BsuI | GTATCC | 1 cut(s) | 136 |
| BtgZI | GCGATG | 1 cut(s) | 97 |
| Cfr13I | GGNCC | 1 cut(s) | 261 |
| Csp6I | GTAC | 2 cut(s) | 34, 133 |
| CviJI | RGCY | 2 cut(s) | 19, 158 |
| CviKI_1 | RGCY | 2 cut(s) | 19, 158 |
| CviQI | GTAC | 2 cut(s) | 34, 133 |
| DpnI | GATC | 3 cut(s) | 52, 180, 198 |
| DpnII | GATC | 3 cut(s) | 50, 178, 196 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 94 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 94 |
| Eam1104I | CTCTTC | 1 cut(s) | 123 |
| EarI | CTCTTC | 1 cut(s) | 123 |
| Eco47I | GGWCC | 1 cut(s) | 261 |
| Eco57I | CTGAAG | 2 cut(s) | 147, 224 |
| Esp3I | CGTCTC | 1 cut(s) | 79 |
| FaiI | YATR | 2 cut(s) | 257, 259 |
| FaqI | GGGAC | 1 cut(s) | 82 |
| FbaI | TGATCA | 1 cut(s) | 178 |
| FblI | GTMKAC | 1 cut(s) | 172 |
| Fnu4HI | GCNGC | 3 cut(s) | 17, 118, 242 |
| Fsp4HI | GCNGC | 3 cut(s) | 17, 118, 242 |
| GluI | GCNGC | 3 cut(s) | 17, 118, 242 |
| Hin1I | GRCGYC | 1 cut(s) | 89 |
| HincII | GTYRAC | 1 cut(s) | 45 |
| HindII | GTYRAC | 1 cut(s) | 45 |
| HphI | GGTGA | 1 cut(s) | 84 |
| Hpy166II | GTNNAC | 2 cut(s) | 45, 173 |
| Hpy188I | TCNGA | 1 cut(s) | 153 |
| Hpy8I | GTNNAC | 2 cut(s) | 45, 173 |
| Hpy99I | CGWCG | 1 cut(s) | 31 |
| HpyCH4III | ACNGT | 1 cut(s) | 96 |
| HpyCH4IV | ACGT | 1 cut(s) | 89 |
| HpyCH4V | TGCA | 4 cut(s) | 16, 120, 211, 275 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 114, 241 |
| HpySE526I | ACGT | 1 cut(s) | 89 |
| Hsp92I | GRCGYC | 1 cut(s) | 89 |
| Ksp22I | TGATCA | 1 cut(s) | 178 |
| Kzo9I | GATC | 3 cut(s) | 50, 178, 196 |
| LmnI | GCTCC | 2 cut(s) | 71, 303 |
| LpnPI | CCDG | 2 cut(s) | 24, 118 |
| Lsp1109I | GCAGC | 2 cut(s) | 28, 104 |
| LweI | GCATC | 1 cut(s) | 198 |
| MaeII | ACGT | 1 cut(s) | 89 |
| MaeIII | GTNAC | 2 cut(s) | 90, 287 |
| MalI | GATC | 3 cut(s) | 52, 180, 198 |
| MbiI | CCGCTC | 1 cut(s) | 235 |
| MboI | GATC | 3 cut(s) | 50, 178, 196 |
| MboII | GAAGA | 3 cut(s) | 140, 217, 260 |
| MnlI | CCTC | 1 cut(s) | 79 |
| MslI | CAYNNNNRTG | 1 cut(s) | 82 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 114, 241 |
| NdeII | GATC | 3 cut(s) | 50, 178, 196 |
| NmuCI | GTSAC | 2 cut(s) | 90, 287 |
| PkrI | GCNGC | 3 cut(s) | 18, 119, 243 |
| PspPI | GGNCC | 1 cut(s) | 261 |
| RsaI | GTAC | 2 cut(s) | 35, 134 |
| RsaNI | GTAC | 2 cut(s) | 34, 133 |
| RseI | CAYNNNNRTG | 1 cut(s) | 82 |
| SatI | GCNGC | 3 cut(s) | 17, 118, 242 |
| Sau3AI | GATC | 3 cut(s) | 50, 178, 196 |
| Sau96I | GGNCC | 1 cut(s) | 261 |
| ScaI | AGTACT | 1 cut(s) | 134 |
| SetI | ASST | 4 cut(s) | 13, 92, 160, 187 |
| SfaNI | GCATC | 1 cut(s) | 198 |
| SinI | GGWCC | 1 cut(s) | 261 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 82 |
| SsiI | CCGC | 3 cut(s) | 140, 235, 241 |
| TaaI | ACNGT | 1 cut(s) | 96 |
| TaiI | ACGT | 1 cut(s) | 92 |
| TatI | WGTACW | 2 cut(s) | 33, 132 |
| TauI | GCSGC | 1 cut(s) | 244 |
| TseFI | GTSAC | 2 cut(s) | 90, 287 |
| TseI | GCWGC | 2 cut(s) | 16, 117 |
| Tsp45I | GTSAC | 2 cut(s) | 90, 287 |
| TspDTI | ATGAA | 2 cut(s) | 17, 299 |
| TspGWI | ACGGA | 2 cut(s) | 61, 102 |
| VpaK11BI | GGWCC | 1 cut(s) | 261 |
| XmiI | GTMKAC | 1 cut(s) | 172 |
| ZraI | GACGTC | 1 cut(s) | 90 |
| ZrmI | AGTACT | 1 cut(s) | 134 |