Rh1CG043600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
8141200 .. 8141513
314 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG043600.1

Sequence Viewer

Length: 210 bp
ATGGCGCAAAGATCCCGCCCTACCACCTGTCCTCGTCATCACAGCCGATGTACAGACCTCTACAGCCGTTGTCGTCGTTGTACTCCAAGTCAACACGATCAAATGTTGGTCGCTCCTCCGTCTCACGGCGATGGACGTCACCGTCCCTTTCCTCGGGATTGGGCATTCAAGTTTCTATTGAGGCAGAGTATCGGATCACTCCTCCGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

69

Amino Acids

8.11

Weight (kDa)

11.33

Isoelectric Point (pI)

84.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 141
AatII GACGTC 1 cut(s) 139
AciI CCGC 1 cut(s) 16
AclWI GGATC 2 cut(s) 6, 202
AcyI GRCGYC 1 cut(s) 136
AfaI GTAC 2 cut(s) 52, 82
AfiI CCNNNNNNNGG 2 cut(s) 125, 153
AgsI TTSAA 1 cut(s) 169
Alw26I GTCTC 1 cut(s) 126
AlwI GGATC 2 cut(s) 6, 202
Ama87I CYCGRG 1 cut(s) 153
AspLEI GCGC 1 cut(s) 7
AsuHPI GGTGA 1 cut(s) 131
AvaI CYCGRG 1 cut(s) 153
BccI CCATC 1 cut(s) 125
BceAI ACGGC 2 cut(s) 51, 142
BcoDI GTCTC 1 cut(s) 126
BfmI CTRYAG 1 cut(s) 61
BmeT110I CYCGRG 1 cut(s) 153
BsaHI GRCGYC 1 cut(s) 136
BsaJI CCNNGG 1 cut(s) 152
BsaWI WCCGGW 1 cut(s) 204
Bsc4I CCNNNNNNNGG 2 cut(s) 125, 153
BseDI CCNNGG 1 cut(s) 152
BseLI CCNNNNNNNGG 2 cut(s) 125, 153
BseRI GAGGAG 2 cut(s) 105, 191
BsiHKCI CYCGRG 1 cut(s) 153
BsiSI CCGG 1 cut(s) 205
BslFI GGGAC 1 cut(s) 129
BslI CCNNNNNNNGG 2 cut(s) 125, 153
BsmAI GTCTC 1 cut(s) 126
BsmBI CGTCTC 1 cut(s) 126
BsmFI GGGAC 1 cut(s) 129
BsmI GAATGC 1 cut(s) 164
BsoBI CYCGRG 1 cut(s) 153
Bsp1407I TGTACA 1 cut(s) 50
Bsp143I GATC 3 cut(s) 11, 97, 194
BspACI CCGC 1 cut(s) 16
BspPI GGATC 2 cut(s) 6, 202
BsrGI TGTACA 1 cut(s) 50
BssECI CCNNGG 1 cut(s) 152
BssMI GATC 3 cut(s) 11, 97, 194
BssNI GRCGYC 1 cut(s) 136
Bst4CI ACNGT 1 cut(s) 143
BstACI GRCGYC 1 cut(s) 136
BstAUI TGTACA 1 cut(s) 50
BstHHI GCGC 1 cut(s) 7
BstKTI GATC 3 cut(s) 14, 100, 197
BstMAI GTCTC 1 cut(s) 126
BstMBI GATC 3 cut(s) 11, 97, 194
BstSFI CTRYAG 1 cut(s) 61
BstX2I RGATCY 1 cut(s) 11
BstYI RGATCY 1 cut(s) 11
BtgZI GCGATG 1 cut(s) 144
CfoI GCGC 1 cut(s) 7
Csp6I GTAC 2 cut(s) 51, 81
CviJI RGCY 2 cut(s) 45, 66
CviKI_1 RGCY 2 cut(s) 45, 66
CviQI GTAC 2 cut(s) 51, 81
DpnI GATC 3 cut(s) 13, 99, 196
DpnII GATC 3 cut(s) 11, 97, 194
DrdI GACNNNNNNGTC 1 cut(s) 141
DseDI GACNNNNNNGTC 1 cut(s) 141
Eco88I CYCGRG 1 cut(s) 153
Esp3I CGTCTC 1 cut(s) 126
FaqI GGGAC 1 cut(s) 129
FauI CCCGC 1 cut(s) 23
GlaI GCGC 1 cut(s) 6
HapII CCGG 1 cut(s) 205
HhaI GCGC 1 cut(s) 7
Hin1I GRCGYC 1 cut(s) 136
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HincII GTYRAC 1 cut(s) 92
HindII GTYRAC 1 cut(s) 92
HpaII CCGG 1 cut(s) 205
HphI GGTGA 1 cut(s) 131
Hpy166II GTNNAC 1 cut(s) 92
Hpy188I TCNGA 1 cut(s) 194
Hpy188III TCNNGA 1 cut(s) 155
Hpy8I GTNNAC 1 cut(s) 92
Hpy99I CGWCG 1 cut(s) 78
HpyCH4III ACNGT 1 cut(s) 143
HpyCH4IV ACGT 1 cut(s) 136
HpySE526I ACGT 1 cut(s) 136
Hsp92I GRCGYC 1 cut(s) 136
HspAI GCGC 1 cut(s) 5
Kzo9I GATC 3 cut(s) 11, 97, 194
LmnI GCTCC 1 cut(s) 118
LpnPI CCDG 1 cut(s) 40
MaeII ACGT 1 cut(s) 136
MaeIII GTNAC 1 cut(s) 137
MalI GATC 3 cut(s) 13, 99, 196
MboI GATC 3 cut(s) 11, 97, 194
MflI RGATCY 1 cut(s) 11
MnlI CCTC 5 cut(s) 42, 68, 126, 162, 174
MslI CAYNNNNRTG 1 cut(s) 129
MspI CCGG 1 cut(s) 205
Mva1269I GAATGC 1 cut(s) 164
NdeII GATC 3 cut(s) 11, 97, 194
NmuCI GTSAC 1 cut(s) 137
PctI GAATGC 1 cut(s) 164
PsuI RGATCY 1 cut(s) 11
RsaI GTAC 2 cut(s) 52, 82
RsaNI GTAC 2 cut(s) 51, 81
RseI CAYNNNNRTG 1 cut(s) 129
Sau3AI GATC 3 cut(s) 11, 97, 194
SetI ASST 3 cut(s) 29, 60, 139
SfcI CTRYAG 1 cut(s) 61
SgeI CNNG 9 cut(s) 27, 39, 45, 99, 107, 137, 165, 167, 181
SmiMI CAYNNNNRTG 1 cut(s) 129
SsiI CCGC 1 cut(s) 16
TaaI ACNGT 1 cut(s) 143
TaiI ACGT 1 cut(s) 139
TatI WGTACW 2 cut(s) 50, 80
TseFI GTSAC 1 cut(s) 137
Tsp45I GTSAC 1 cut(s) 137
TspGWI ACGGA 1 cut(s) 108
ZraI GACGTC 1 cut(s) 137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.