Rh4DG099000

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
15000089 .. 15000460
372 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG099000.1

Sequence Viewer

Length: 192 bp
ATGGAGATTTCCAGAAGCCTCGCTTTTCCAGACACCCATCCCATCCTCGCCCTCCTTCGAGTATCAATGGATTACGATTATCGGAAAACCTCATCCTACGGTGCCCAGATCCCGCCCTACCACCTCGCTGCGTCATCACAGCTGATGTACGGACCGCCAAAGTCGTCGCCAGCGTCAACCGGAACGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

63

Amino Acids

6.86

Weight (kDa)

8.1

Isoelectric Point (pI)

56.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 101
AciI CCGC 2 cut(s) 113, 155
AclWI GGATC 1 cut(s) 103
AfaI GTAC 1 cut(s) 149
AluBI AGCT 1 cut(s) 142
AluI AGCT 1 cut(s) 142
AlwI GGATC 1 cut(s) 103
ApeKI GCWGC 1 cut(s) 128
AspS9I GGNCC 1 cut(s) 152
AvaII GGWCC 1 cut(s) 152
BaeGI GKGCMC 1 cut(s) 106
BanI GGYRCC 1 cut(s) 101
BbvI GCAGC 1 cut(s) 115
BccI CCATC 2 cut(s) 45, 50
BisI GCNGC 1 cut(s) 129
BlsI GCNGC 1 cut(s) 130
Bme18I GGWCC 1 cut(s) 152
BmgT120I GGNCC 1 cut(s) 152
BmiI GGNNCC 1 cut(s) 103
BsaWI WCCGGW 1 cut(s) 179
BseGI GGATG 3 cut(s) 37, 42, 92
BseSI GKGCMC 1 cut(s) 106
BseXI GCAGC 1 cut(s) 115
BshNI GGYRCC 1 cut(s) 101
BsiSI CCGG 1 cut(s) 180
Bsp1286I GDGCHC 1 cut(s) 106
Bsp143I GATC 1 cut(s) 108
BspACI CCGC 2 cut(s) 113, 155
BspLI GGNNCC 1 cut(s) 103
BspPI GGATC 1 cut(s) 103
BspT107I GGYRCC 1 cut(s) 101
BssMI GATC 1 cut(s) 108
Bst4CI ACNGT 1 cut(s) 101
BstC8I GCNNGC 1 cut(s) 171
BstF5I GGATG 3 cut(s) 37, 42, 92
BstKTI GATC 1 cut(s) 111
BstMBI GATC 1 cut(s) 108
BstSLI GKGCMC 1 cut(s) 106
BstV1I GCAGC 1 cut(s) 115
BstX2I RGATCY 1 cut(s) 108
BstYI RGATCY 1 cut(s) 108
BtsCI GGATG 3 cut(s) 37, 42, 92
Cac8I GCNNGC 1 cut(s) 171
Cfr13I GGNCC 1 cut(s) 152
CpoI CGGWCCG 1 cut(s) 152
CseI GACGC 2 cut(s) 120, 162
Csp6I GTAC 1 cut(s) 148
CspI CGGWCCG 1 cut(s) 152
CviJI RGCY 2 cut(s) 18, 142
CviKI_1 RGCY 2 cut(s) 18, 142
CviQI GTAC 1 cut(s) 148
DpnI GATC 1 cut(s) 110
DpnII GATC 1 cut(s) 108
Eco47I GGWCC 1 cut(s) 152
FalI AAGNNNNNCTT 2 cut(s) 7, 39
FauI CCCGC 1 cut(s) 120
Fnu4HI GCNGC 1 cut(s) 129
FokI GGATG 3 cut(s) 24, 29, 79
Fsp4HI GCNGC 1 cut(s) 129
GluI GCNGC 1 cut(s) 129
HapII CCGG 1 cut(s) 180
HgaI GACGC 2 cut(s) 120, 162
HincII GTYRAC 1 cut(s) 177
HindII GTYRAC 1 cut(s) 177
HpaII CCGG 1 cut(s) 180
Hpy166II GTNNAC 1 cut(s) 177
Hpy188I TCNGA 1 cut(s) 84
Hpy188III TCNNGA 2 cut(s) 12, 29
Hpy8I GTNNAC 1 cut(s) 177
Hpy99I CGWCG 1 cut(s) 169
HpyAV CCTTC 1 cut(s) 65
HpyCH4III ACNGT 1 cut(s) 101
Kzo9I GATC 1 cut(s) 108
LpnPI CCDG 4 cut(s) 25, 42, 119, 183
Lsp1109I GCAGC 1 cut(s) 115
MalI GATC 1 cut(s) 110
MboI GATC 1 cut(s) 108
MflI RGATCY 1 cut(s) 108
MhlI GDGCHC 1 cut(s) 106
MnlI CCTC 5 cut(s) 29, 56, 62, 100, 134
MspA1I CMGCKG 1 cut(s) 142
MspI CCGG 1 cut(s) 180
NdeII GATC 1 cut(s) 108
NlaIV GGNNCC 1 cut(s) 103
PcsI WCGNNNNNNNCGW 1 cut(s) 170
PkrI GCNGC 1 cut(s) 130
PspN4I GGNNCC 1 cut(s) 103
PspPI GGNCC 1 cut(s) 152
PsuI RGATCY 1 cut(s) 108
PvuII CAGCTG 1 cut(s) 142
RsaI GTAC 1 cut(s) 149
RsaNI GTAC 1 cut(s) 148
Rsr2I CGGWCCG 1 cut(s) 152
RsrII CGGWCCG 1 cut(s) 152
SatI GCNGC 1 cut(s) 129
Sau3AI GATC 1 cut(s) 108
Sau96I GGNCC 1 cut(s) 152
SduI GDGCHC 1 cut(s) 106
SetI ASST 3 cut(s) 92, 126, 144
SgeI CNNG 9 cut(s) 24, 32, 41, 59, 71, 118, 124, 137, 182
SinI GGWCC 1 cut(s) 152
SsiI CCGC 2 cut(s) 113, 155
TaaI ACNGT 1 cut(s) 101
TaqI TCGA 1 cut(s) 58
TseI GCWGC 1 cut(s) 128
TspGWI ACGGA 1 cut(s) 165
VpaK11BI GGWCC 1 cut(s) 152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.