RchiOBHm_Chr6g0266651

(DL)-glycerol-3-phosphatase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
23134094 .. 23135502
1409 bp
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UTR
Exon/CDS
Intron
PRQ23914

Sequence Viewer

Length: 165 bp
ATGATGGGAAACAAAGCAATAGAAGCTGCTCGGGTCTTTGTTGAAGACACTGGACTTAGTGACTCTCTTATTGCTGAGGACTTTCTGGTTGAAAGAGAGGTAATGTTGCAGAAATTGTTTCCAACAAGCGAGCTGATGCCAGGTACCATTAGTATATGCAAATAG

Protein Analysis

54

Amino Acids

5.98

Weight (kDa)

4.44

Isoelectric Point (pI)

43.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 143
AccB1I GGYRCC 1 cut(s) 143
AfaI GTAC 1 cut(s) 145
AgsI TTSAA 2 cut(s) 44, 92
AjnI CCWGG 1 cut(s) 139
AluBI AGCT 2 cut(s) 26, 133
AluI AGCT 2 cut(s) 26, 133
Ama87I CYCGRG 1 cut(s) 30
ApeKI GCWGC 1 cut(s) 26
Asp718I GGTACC 1 cut(s) 143
AvaI CYCGRG 1 cut(s) 30
BanI GGYRCC 1 cut(s) 143
BbsI GAAGAC 1 cut(s) 51
BbvCI CCTCAGC 1 cut(s) 75
BbvI GCAGC 1 cut(s) 13
BciT130I CCWGG 1 cut(s) 141
BisI GCNGC 1 cut(s) 27
BlsI GCNGC 1 cut(s) 28
Bme1390I CCNGG 1 cut(s) 141
BmeT110I CYCGRG 1 cut(s) 30
BmiI GGNNCC 1 cut(s) 145
BmrFI CCNGG 1 cut(s) 141
BmsI GCATC 1 cut(s) 126
BpiI GAAGAC 1 cut(s) 51
Bpu10I CCTNAGC 1 cut(s) 75
Bse1I ACTGG 1 cut(s) 55
BseBI CCWGG 1 cut(s) 141
BseMII CTCAG 1 cut(s) 66
BseNI ACTGG 1 cut(s) 55
BseXI GCAGC 1 cut(s) 13
BshNI GGYRCC 1 cut(s) 143
BsiHKCI CYCGRG 1 cut(s) 30
BsoBI CYCGRG 1 cut(s) 30
BspCNI CTCAG 1 cut(s) 67
BspLI GGNNCC 1 cut(s) 145
BspT107I GGYRCC 1 cut(s) 143
BsrI ACTGG 1 cut(s) 55
Bst2UI CCWGG 1 cut(s) 141
BstC8I GCNNGC 1 cut(s) 131
BstDEI CTNAG 2 cut(s) 56, 75
BstMWI GCNNNNNNNGC 1 cut(s) 23
BstNI CCWGG 1 cut(s) 141
BstSCI CCNGG 1 cut(s) 139
BstV1I GCAGC 1 cut(s) 13
BstV2I GAAGAC 1 cut(s) 51
BtsIMutI CAGTG 1 cut(s) 48
Cac8I GCNNGC 1 cut(s) 131
Csp6I GTAC 1 cut(s) 144
CviJI RGCY 2 cut(s) 26, 133
CviKI_1 RGCY 2 cut(s) 26, 133
CviQI GTAC 1 cut(s) 144
DdeI CTNAG 2 cut(s) 56, 75
Eco88I CYCGRG 1 cut(s) 30
EcoRII CCWGG 1 cut(s) 139
FaiI YATR 2 cut(s) 155, 157
Fnu4HI GCNGC 1 cut(s) 27
Fsp4HI GCNGC 1 cut(s) 27
GluI GCNGC 1 cut(s) 27
HinfI GANTC 1 cut(s) 62
HpyCH4V TGCA 2 cut(s) 109, 159
HpyF10VI GCNNNNNNNGC 1 cut(s) 23
HpyF3I CTNAG 2 cut(s) 56, 75
KpnI GGTACC 1 cut(s) 147
LpnPI CCDG 4 cut(s) 36, 71, 126, 153
Lsp1109I GCAGC 1 cut(s) 13
LweI GCATC 1 cut(s) 126
MaeIII GTNAC 1 cut(s) 59
MboII GAAGA 1 cut(s) 56
MluCI AATT 1 cut(s) 113
MlyI GAGTC 1 cut(s) 56
MmeI TCCRAC 1 cut(s) 146
MnlI CCTC 2 cut(s) 70, 91
MspR9I CCNGG 1 cut(s) 141
MvaI CCWGG 1 cut(s) 141
MwoI GCNNNNNNNGC 1 cut(s) 23
NlaIV GGNNCC 1 cut(s) 145
NmuCI GTSAC 1 cut(s) 59
PkrI GCNGC 1 cut(s) 28
PleI GAGTC 1 cut(s) 56
PpsI GAGTC 1 cut(s) 56
Psp6I CCWGG 1 cut(s) 139
PspGI CCWGG 1 cut(s) 139
PspN4I GGNNCC 1 cut(s) 145
RsaI GTAC 1 cut(s) 145
RsaNI GTAC 1 cut(s) 144
SatI GCNGC 1 cut(s) 27
SchI GAGTC 1 cut(s) 56
ScrFI CCNGG 1 cut(s) 141
SetI ASST 4 cut(s) 28, 102, 135, 145
SfaNI GCATC 1 cut(s) 126
SgeI CNNG 8 cut(s) 42, 44, 63, 98, 138, 142, 152, 153
Sse9I AATT 1 cut(s) 113
StyD4I CCNGG 1 cut(s) 139
TasI AATT 1 cut(s) 113
TscAI CASTG 1 cut(s) 55
TseFI GTSAC 1 cut(s) 59
TseI GCWGC 1 cut(s) 26
Tsp45I GTSAC 1 cut(s) 59
TspRI CASTG 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.