Rroxscaffold_4G00321760

(DL)-glycerol-3-phosphatase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
51374462 .. 51375921
1460 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00321760.1

Sequence Viewer

Length: 207 bp
ATGATGGGAAAGAAAGCAATAGAAGCTGCTCGGGTCTTTGTTGAAGACACCGGACTTGGTGACTCTCTCACCGCTGAGGACTTTCGGTTGATCTCACTTGCTGAGGACTTTCTGGTTGAAAGAGAGGCAATGTTGCAGAAATTGTTTCCAACAAGCGAGCTGATGCCGCTGCTTGTGTTTTGCTTGGAAGAATATGAAAGAGAGTGA

Protein Analysis

68

Amino Acids

7.79

Weight (kDa)

4.37

Isoelectric Point (pI)

42.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 72, 167
AgsI TTSAA 2 cut(s) 44, 119
AluBI AGCT 2 cut(s) 26, 160
AluI AGCT 2 cut(s) 26, 160
Ama87I CYCGRG 1 cut(s) 30
ApeKI GCWGC 2 cut(s) 26, 169
AsuHPI GGTGA 2 cut(s) 61, 71
AvaI CYCGRG 1 cut(s) 30
BbsI GAAGAC 1 cut(s) 51
BbvCI CCTCAGC 2 cut(s) 75, 102
BbvI GCAGC 2 cut(s) 13, 156
BisI GCNGC 3 cut(s) 27, 167, 170
BlsI GCNGC 3 cut(s) 28, 168, 171
BmeT110I CYCGRG 1 cut(s) 30
BmsI GCATC 1 cut(s) 153
BpiI GAAGAC 1 cut(s) 51
Bpu10I CCTNAGC 2 cut(s) 75, 102
BsaWI WCCGGW 1 cut(s) 50
Bse3DI GCAATG 1 cut(s) 135
BseMI GCAATG 1 cut(s) 135
BseMII CTCAG 2 cut(s) 66, 93
BseXI GCAGC 2 cut(s) 13, 156
BsiHKCI CYCGRG 1 cut(s) 30
BsiSI CCGG 1 cut(s) 51
BsoBI CYCGRG 1 cut(s) 30
Bsp143I GATC 1 cut(s) 90
BspACI CCGC 2 cut(s) 72, 167
BspCNI CTCAG 2 cut(s) 67, 94
BsrDI GCAATG 1 cut(s) 135
BssMI GATC 1 cut(s) 90
BstC8I GCNNGC 1 cut(s) 158
BstDEI CTNAG 2 cut(s) 75, 102
BstKTI GATC 1 cut(s) 93
BstMBI GATC 1 cut(s) 90
BstMWI GCNNNNNNNGC 2 cut(s) 23, 166
BstV1I GCAGC 2 cut(s) 13, 156
BstV2I GAAGAC 1 cut(s) 51
Cac8I GCNNGC 1 cut(s) 158
CviJI RGCY 2 cut(s) 26, 160
CviKI_1 RGCY 2 cut(s) 26, 160
DdeI CTNAG 2 cut(s) 75, 102
DpnI GATC 1 cut(s) 92
DpnII GATC 1 cut(s) 90
Eco88I CYCGRG 1 cut(s) 30
FaiI YATR 1 cut(s) 195
Fnu4HI GCNGC 3 cut(s) 27, 167, 170
Fsp4HI GCNGC 3 cut(s) 27, 167, 170
GluI GCNGC 3 cut(s) 27, 167, 170
HapII CCGG 1 cut(s) 51
HinfI GANTC 1 cut(s) 62
HpaII CCGG 1 cut(s) 51
HphI GGTGA 2 cut(s) 61, 71
HpyCH4V TGCA 1 cut(s) 136
HpyF10VI GCNNNNNNNGC 2 cut(s) 23, 166
HpyF3I CTNAG 2 cut(s) 75, 102
Kzo9I GATC 1 cut(s) 90
LpnPI CCDG 2 cut(s) 64, 98
Lsp1109I GCAGC 2 cut(s) 13, 156
LweI GCATC 1 cut(s) 153
MaeIII GTNAC 1 cut(s) 59
MalI GATC 1 cut(s) 92
MboI GATC 1 cut(s) 90
MboII GAAGA 2 cut(s) 56, 200
MluCI AATT 1 cut(s) 140
MlyI GAGTC 1 cut(s) 56
MmeI TCCRAC 1 cut(s) 173
MnlI CCTC 3 cut(s) 70, 97, 118
MspA1I CMGCKG 2 cut(s) 74, 169
MspI CCGG 1 cut(s) 51
MwoI GCNNNNNNNGC 2 cut(s) 23, 166
NdeII GATC 1 cut(s) 90
NmuCI GTSAC 1 cut(s) 59
PkrI GCNGC 3 cut(s) 28, 168, 171
PleI GAGTC 1 cut(s) 56
PpsI GAGTC 1 cut(s) 56
SatI GCNGC 3 cut(s) 27, 167, 170
Sau3AI GATC 1 cut(s) 90
SchI GAGTC 1 cut(s) 56
SetI ASST 2 cut(s) 28, 162
SfaNI GCATC 1 cut(s) 153
Sse9I AATT 1 cut(s) 140
SsiI CCGC 2 cut(s) 72, 167
TasI AATT 1 cut(s) 140
TauI GCSGC 1 cut(s) 169
TseFI GTSAC 1 cut(s) 59
TseI GCWGC 2 cut(s) 26, 169
Tsp45I GTSAC 1 cut(s) 59
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.