Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g10791 |
| rosa_chinensis | RchiOBHm_Chr6g0268571 RchiOBHm_Chr6g0268611 RchiOBHm_Chr6g0268691 RchiOBHm_Chr6g0268791 RchiOBHm_Chr6g0268801 |
| rosa_laevigata | RLG00000013896 RLG00000013900 |
| rosa_multiflora | Rmu_sc0000869.1_g000012 Rmu_sc0005121.1_g000006 Rmu_sc0005125.1_g000014 Rmu_sc0006115.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00312470 Rroxscaffold_7G00199160 Rroxscaffold_7G00199690 |
| rosa_rugosa | Rorug06G0043200 |
| rosa_samantha | Rh6AG162800 Rh6AG163800 Rh6BG166900 Rh6BG167800 Rh6BG168400 Rh6CG160900 Rh6CG161400 Rh6CG162000 Rh6CG162600 Rh6DG152200 Rh6DG152900 Rh6DG153600 Rh6DG154200 |
| rosa_wichuraiana | Rw0G004740 Rw6G014050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 336 |
| AfeI | AGCGCT | 1 cut(s) | 91 |
| AgsI | TTSAA | 2 cut(s) | 226, 259 |
| AluBI | AGCT | 1 cut(s) | 36 |
| AluI | AGCT | 1 cut(s) | 36 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 211 |
| Aor51HI | AGCGCT | 1 cut(s) | 91 |
| ApeKI | GCWGC | 1 cut(s) | 380 |
| AspLEI | GCGC | 1 cut(s) | 92 |
| AsuHPI | GGTGA | 1 cut(s) | 104 |
| BbvI | GCAGC | 1 cut(s) | 367 |
| BfmI | CTRYAG | 1 cut(s) | 345 |
| BfoI | RGCGCY | 1 cut(s) | 93 |
| BisI | GCNGC | 1 cut(s) | 381 |
| BlsI | GCNGC | 1 cut(s) | 382 |
| BmsI | GCATC | 1 cut(s) | 392 |
| BpmI | CTGGAG | 1 cut(s) | 188 |
| BsaAI | YACGTR | 1 cut(s) | 354 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 186, 216 |
| BseGI | GGATG | 1 cut(s) | 165 |
| BseXI | GCAGC | 1 cut(s) | 367 |
| BspACI | CCGC | 1 cut(s) | 336 |
| Bst4CI | ACNGT | 1 cut(s) | 332 |
| BstBAI | YACGTR | 1 cut(s) | 354 |
| BstF5I | GGATG | 1 cut(s) | 165 |
| BstH2I | RGCGCY | 1 cut(s) | 93 |
| BstHHI | GCGC | 1 cut(s) | 92 |
| BstNSI | RCATGY | 1 cut(s) | 425 |
| BstSFI | CTRYAG | 1 cut(s) | 345 |
| BstSNI | TACGTA | 1 cut(s) | 354 |
| BstV1I | GCAGC | 1 cut(s) | 367 |
| BtsCI | GGATG | 1 cut(s) | 165 |
| BtsIMutI | CAGTG | 1 cut(s) | 209 |
| CaiI | CAGNNNCTG | 1 cut(s) | 211 |
| CfoI | GCGC | 1 cut(s) | 92 |
| CviAII | CATG | 4 cut(s) | 107, 232, 325, 422 |
| CviJI | RGCY | 3 cut(s) | 36, 272, 405 |
| CviKI_1 | RGCY | 3 cut(s) | 36, 272, 405 |
| Eco105I | TACGTA | 1 cut(s) | 354 |
| Eco47III | AGCGCT | 1 cut(s) | 91 |
| EcoT22I | ATGCAT | 1 cut(s) | 233 |
| FaeI | CATG | 4 cut(s) | 110, 235, 328, 425 |
| FatI | CATG | 4 cut(s) | 106, 231, 324, 421 |
| Fnu4HI | GCNGC | 1 cut(s) | 381 |
| FokI | GGATG | 1 cut(s) | 152 |
| Fsp4HI | GCNGC | 1 cut(s) | 381 |
| GlaI | GCGC | 1 cut(s) | 91 |
| GluI | GCNGC | 1 cut(s) | 381 |
| GsuI | CTGGAG | 1 cut(s) | 188 |
| HaeII | RGCGCY | 1 cut(s) | 93 |
| HhaI | GCGC | 1 cut(s) | 92 |
| Hin1II | CATG | 4 cut(s) | 110, 235, 328, 425 |
| Hin6I | GCGC | 1 cut(s) | 90 |
| HinP1I | GCGC | 1 cut(s) | 90 |
| HinfI | GANTC | 2 cut(s) | 82, 458 |
| HphI | GGTGA | 1 cut(s) | 104 |
| Hpy188I | TCNGA | 2 cut(s) | 40, 309 |
| Hpy188III | TCNNGA | 1 cut(s) | 205 |
| HpyAV | CCTTC | 2 cut(s) | 125, 197 |
| HpyCH4III | ACNGT | 1 cut(s) | 332 |
| HpyCH4IV | ACGT | 1 cut(s) | 353 |
| HpyCH4V | TGCA | 3 cut(s) | 231, 328, 383 |
| HpySE526I | ACGT | 1 cut(s) | 353 |
| Hsp92II | CATG | 4 cut(s) | 110, 235, 328, 425 |
| HspAI | GCGC | 1 cut(s) | 90 |
| LpnPI | CCDG | 2 cut(s) | 111, 218 |
| Lsp1109I | GCAGC | 1 cut(s) | 367 |
| LweI | GCATC | 1 cut(s) | 392 |
| MaeII | ACGT | 1 cut(s) | 353 |
| MboII | GAAGA | 2 cut(s) | 214, 378 |
| MluCI | AATT | 1 cut(s) | 248 |
| MlyI | GAGTC | 1 cut(s) | 452 |
| MmeI | TCCRAC | 2 cut(s) | 30, 421 |
| MnlI | CCTC | 4 cut(s) | 156, 179, 212, 447 |
| Mph1103I | ATGCAT | 1 cut(s) | 233 |
| MseI | TTAA | 4 cut(s) | 96, 266, 374, 393 |
| MslI | CAYNNNNRTG | 1 cut(s) | 426 |
| NlaIII | CATG | 4 cut(s) | 110, 235, 328, 425 |
| NsiI | ATGCAT | 1 cut(s) | 233 |
| NspI | RCATGY | 1 cut(s) | 425 |
| PfeI | GAWTC | 1 cut(s) | 82 |
| PkrI | GCNGC | 1 cut(s) | 382 |
| PleI | GAGTC | 1 cut(s) | 452 |
| PpsI | GAGTC | 1 cut(s) | 452 |
| Ppu21I | YACGTR | 1 cut(s) | 354 |
| PstNI | CAGNNNCTG | 1 cut(s) | 211 |
| RseI | CAYNNNNRTG | 1 cut(s) | 426 |
| SaqAI | TTAA | 4 cut(s) | 96, 266, 374, 393 |
| SatI | GCNGC | 1 cut(s) | 381 |
| SchI | GAGTC | 1 cut(s) | 452 |
| SetI | ASST | 5 cut(s) | 38, 117, 204, 317, 356 |
| SfaNI | GCATC | 1 cut(s) | 392 |
| SfcI | CTRYAG | 1 cut(s) | 345 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 426 |
| SnaBI | TACGTA | 1 cut(s) | 354 |
| Sse9I | AATT | 1 cut(s) | 248 |
| SsiI | CCGC | 1 cut(s) | 336 |
| TaaI | ACNGT | 1 cut(s) | 332 |
| TaiI | ACGT | 1 cut(s) | 356 |
| TasI | AATT | 1 cut(s) | 248 |
| TfiI | GAWTC | 1 cut(s) | 82 |
| Tru1I | TTAA | 4 cut(s) | 96, 266, 374, 393 |
| Tru9I | TTAA | 4 cut(s) | 96, 266, 374, 393 |
| TscAI | CASTG | 1 cut(s) | 216 |
| TseI | GCWGC | 1 cut(s) | 380 |
| TspDTI | ATGAA | 3 cut(s) | 34, 248, 313 |
| TspRI | CASTG | 1 cut(s) | 216 |
| XceI | RCATGY | 1 cut(s) | 425 |
| Zsp2I | ATGCAT | 1 cut(s) | 233 |