Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006115.1

Orthogroup ID

OG0004842

Physical Location & Seq

Genomic Coordinates Reverse (-)

3133 .. 9693

Gene Structure 6561 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006115.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

atggctgacttctgccgaaatgggttcagttttcttgctctgaaaaccttatcattcatgcacagtagcggtgttcctatagatacgtatgctttgtgtagttctttaactgctgcatcttctattaaagatgttggcttcggtagaaagatacatgcccatgtggtaaagtcaggctggtgctccagtgtttttgttgggagtgctctgattgatttgtatgccaagtcattggttataggagatgcaggccaagtgtttgatgaaatgccgctgagaaacactgtttgtgcaaacgcacttttatcaggttatggtgatgccaagttgtggacagaggcagtagaattgaccaggaagatgccggcactgagtttggagtatgatcacttgacattgtccgcggcattacgtgcctgtgctgggctagctgcagttgaattgggtaggcaggtacatggttatttgatgcgttcggtttatgatgtgggaagtgatatgtttctgctgagttccttgattgaaatgtatggtaaatgtgggctggtagccaaggctcagaaagttttaaattttgatggaaaaggagaggggaaaagagacgtggttatgtggacttcactgcttggtgtgtatggtagaaatggatactataaagaggtacttgaactattcaaagatatgatgatggaaggaattagcccagatggggtggcatttgtgacagtcatctcagcttgtgctcgcaccggtcaattgcggctcggcattgagtattttgaatccatggaactcaagttcagcttgacaccaggtccagaacactacagttgtctagttgatttgctgtgtagagctggtgaattaggcaaggcatggaagctcgttgatgagatgcttaataaaggtcacagcagctgcactgtccctatgtggggagctttgcttaatgcttgcaaagatcaaggtgatcttgaattgggtaaactggctgctcaaagggcacttgagttgaatcctcataatgatggtatttatgttttgctatcaaatttatatgccaggttcggggagcttcgagaccccgcagtggtctgcaacttcgcgccagaaaccctaaacgagagaacagctctcatgagcaatgattcatcttccgtaatgaacggtccagatcagcctgacacaagcgcgcccgcgcccaaaccacagcgcaccaagatcgttaaactcgaagacactgaaaagaagatttttcataagaaactcaaagatgttgagattagtgttccgatagtgtatggcaatattgcattctggctcggtaagaaggcaagcgagtaccaatcacataagtggactgtgtatgttcgtggggcaaccaatgaggatctgggagtggtgataaagcgtgttgttttccagttgcattccagtttcaataatcccacaagggtggttgagtcaccgccatttgagttatctgaatgtggctggggtgaatttgaaatcgcaattacactatttttccacagtgatgtttgcgagaagccattaaacttatttcatcatttgaagttgtacccagaagatgaatctggtcctatgtcgaccaagaaacccgtggtcgtggaatcctatgatgagattgtgttccctgagccttcagagagttttttagctcgcgtccagaatcaccctgctatagcctcccccagattaccttgtggtttgactctgcctcctgtgccggttgaagatccaagtaaaagaaagagaggtgacacaaaagatcatcccctggcccagtggttcatgaatttttcagaagctgatgagcttctacaactggctgcagctcgtcagcaggttcaagctcatattgctaaatttcgaagagagataagttcgatggatgtgcaacaacaacaagtgaattctgtctccgaccagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

651

Amino Acids

72.02

Weight (kDa)

5.98

Isoelectric Point (pI)

41.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004842)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g10791
rosa_chinensis	RchiOBHm_Chr6g0268571 RchiOBHm_Chr6g0268611 RchiOBHm_Chr6g0268691 RchiOBHm_Chr6g0268791 RchiOBHm_Chr6g0268801
rosa_laevigata	RLG00000013896 RLG00000013900
rosa_multiflora	Rmu_sc0000869.1_g000012 Rmu_sc0005121.1_g000006 Rmu_sc0005125.1_g000014 Rmu_sc0006115.1_g000001
rosa_roxburghii	Rroxscaffold_4G00312470 Rroxscaffold_7G00199160 Rroxscaffold_7G00199690
rosa_rugosa	Rorug06G0043200
rosa_samantha	Rh6AG162800 Rh6AG163800 Rh6BG166900 Rh6BG167800 Rh6BG168400 Rh6CG160900 Rh6CG161400 Rh6CG162000 Rh6CG162600 Rh6DG152200 Rh6DG152900 Rh6DG153600 Rh6DG154200
rosa_wichuraiana	Rw0G004740 Rw6G014050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	442, 1858
AccB7I	CCANNNNNTGG	1 cut(s)	330
AccI	GTMKAC	1 cut(s)	1610
AccII	CGCG	5 cut(s)	404, 1106, 1193, 1199, 1686
AciI	CCGC	8 cut(s)	69, 272, 402, 404, 760, 1086, 1197, 1469
AclWI	GGATC	2 cut(s)	1398, 1754
AcsI	RAATTY	6 cut(s)	571, 1051, 1502, 1819, 1889, 1936
AcuI	CTGAAG	1 cut(s)	1650
AfaI	GTAC	4 cut(s)	456, 663, 1343, 1583
AfiI	CCNNNNNNNGG	7 cut(s)	330, 423, 709, 934, 935, 1068, 1090
AgeI	ACCGGT	1 cut(s)	749
AhdI	GACNNNNNGTC	1 cut(s)	813
AjiI	CACGTC	1 cut(s)	604
AjnI	CCWGG	4 cut(s)	353, 811, 1061, 1800
AleI	CACNNNNGTG	2 cut(s)	1354, 1454
AloI	GAACNNNNNNTCC	2 cut(s)	782, 814
Alw21I	GWGCWC	3 cut(s)	185, 208, 745
Alw26I	GTCTC	3 cut(s)	594, 1074, 1948
AlwI	GGATC	2 cut(s)	1398, 1754
AlwNI	CAGNNNCTG	2 cut(s)	918, 1832
AoxI	GGCC	2 cut(s)	250, 1803
ApeKI	GCWGC	7 cut(s)	113, 431, 915, 918, 992, 1853, 1856
ApoI	RAATTY	6 cut(s)	571, 1051, 1502, 1819, 1889, 1936
AsiGI	ACCGGT	1 cut(s)	749
AspLEI	GCGC	5 cut(s)	1108, 1193, 1195, 1201, 1215
AspS9I	GGNCC	4 cut(s)	815, 1169, 1601, 1804
AsuHPI	GGTGA	8 cut(s)	329, 872, 980, 1414, 1458, 1511, 1688, 1793
AsuII	TTCGAA	1 cut(s)	1894
AsuNHI	GCTAGC	1 cut(s)	427
AvaII	GGWCC	3 cut(s)	815, 1169, 1601
BaeGI	GKGCMC	1 cut(s)	1006
BbsI	GAAGAC	1 cut(s)	1242
Bbv12I	GWGCWC	3 cut(s)	185, 208, 745
BbvI	GCAGC	7 cut(s)	100, 418, 905, 927, 979, 1840, 1868
BccI	CCATC	5 cut(s)	572, 682, 701, 1022, 1906
BcgI	CGANNNNNNTGC	4 cut(s)	1204, 1238, 1900, 1934
BciT130I	CCWGG	4 cut(s)	355, 813, 1063, 1802
BciVI	GTATCC	1 cut(s)	641
BclI	TGATCA	1 cut(s)	385
BcoDI	GTCTC	3 cut(s)	594, 1074, 1948
BfaI	CTAG	2 cut(s)	428, 836
BfmI	CTRYAG	5 cut(s)	78, 432, 826, 1704, 1854
BfuAI	ACCTGC	2 cut(s)	442, 1858
BfuI	GTATCC	1 cut(s)	641
Bme1390I	CCNGG	4 cut(s)	355, 813, 1063, 1802
Bme18I	GGWCC	3 cut(s)	815, 1169, 1601
BmeRI	GACNNNNNGTC	1 cut(s)	813
BmgBI	CACGTC	1 cut(s)	604
BmgT120I	GGNCC	4 cut(s)	815, 1169, 1601, 1804
BmrFI	CCNGG	4 cut(s)	355, 813, 1063, 1802
BmrI	ACTGGG	1 cut(s)	1801
BmsI	GCATC	6 cut(s)	125, 235, 310, 351, 459, 885
BmtI	GCTAGC	1 cut(s)	431
BmuI	ACTGGG	1 cut(s)	1801
BpiI	GAAGAC	1 cut(s)	1242
BplI	GAGNNNNNCTC	2 cut(s)	1117, 1149
BpmI	CTGGAG	1 cut(s)	169
Bpu10I	CCTNAGC	1 cut(s)	1659
Bpu14I	TTCGAA	1 cut(s)	1894
BpuEI	CTTGAG	2 cut(s)	779, 1028
BsaAI	YACGTR	2 cut(s)	87, 413
BsaI	GGTCTC	1 cut(s)	1074
BsaJI	CCNNGG	5 cut(s)	402, 552, 786, 1623, 1800
BsaWI	WCCGGW	1 cut(s)	749
BsaXI	ACNNNNNCTCC	2 cut(s)	1726, 1756
Bsc4I	CCNNNNNNNGG	7 cut(s)	330, 423, 709, 934, 935, 1068, 1090
Bse118I	RCCGGY	3 cut(s)	364, 749, 1750
Bse1I	ACTGG	7 cut(s)	186, 993, 1423, 1434, 1807, 1854, 1951
Bse3DI	GCAATG	1 cut(s)	1150
BseBI	CCWGG	4 cut(s)	355, 813, 1063, 1802
BseDI	CCNNGG	5 cut(s)	402, 552, 786, 1623, 1800
BseGI	GGATG	2 cut(s)	1795, 1921
BseLI	CCNNNNNNNGG	7 cut(s)	330, 423, 709, 934, 935, 1068, 1090
BseMI	GCAATG	1 cut(s)	1150
BseMII	CTCAG	6 cut(s)	266, 362, 500, 572, 747, 1650
BseNI	ACTGG	7 cut(s)	186, 993, 1423, 1434, 1807, 1854, 1951
BsePI	GCGCGC	1 cut(s)	1191
BseSI	GKGCMC	1 cut(s)	1006
BseXI	GCAGC	7 cut(s)	100, 418, 905, 927, 979, 1840, 1868
BseYI	CCCAGC	2 cut(s)	422, 1494
BsgI	GTGCAG	1 cut(s)	904
Bsh1236I	CGCG	5 cut(s)	404, 1106, 1193, 1199, 1686
BshFI	GGCC	2 cut(s)	252, 1805
BshTI	ACCGGT	1 cut(s)	749
BsiHKAI	GWGCWC	3 cut(s)	185, 208, 745
BsiSI	CCGG	3 cut(s)	365, 750, 1751
BslFI	GGGAC	1 cut(s)	911
BslI	CCNNNNNNNGG	7 cut(s)	330, 423, 709, 934, 935, 1068, 1090
BsmAI	GTCTC	3 cut(s)	594, 1074, 1948
BsmBI	CGTCTC	1 cut(s)	594
BsmFI	GGGAC	1 cut(s)	911
BsmI	GAATGC	2 cut(s)	1313, 1429
BsnI	GGCC	2 cut(s)	252, 1805
Bso31I	GGTCTC	1 cut(s)	1074
Bsp119I	TTCGAA	1 cut(s)	1894
Bsp1286I	GDGCHC	4 cut(s)	185, 208, 745, 1006
Bsp143I	GATC	8 cut(s)	385, 961, 970, 1174, 1221, 1390, 1759, 1792
Bsp19I	CCATGG	1 cut(s)	786
BspACI	CCGC	8 cut(s)	69, 272, 402, 404, 760, 1086, 1197, 1469
BspANI	GGCC	2 cut(s)	252, 1805
BspCNI	CTCAG	6 cut(s)	267, 363, 501, 571, 746, 1651
BspFNI	CGCG	5 cut(s)	404, 1106, 1193, 1199, 1686
BspHI	TCATGA	2 cut(s)	1137, 1815
BspMAI	CTGCAG	2 cut(s)	436, 1858
BspMI	ACCTGC	2 cut(s)	442, 1858
BspOI	GCTAGC	1 cut(s)	431
BspPI	GGATC	2 cut(s)	1398, 1754
BspT104I	TTCGAA	1 cut(s)	1894
BspTNI	GGTCTC	1 cut(s)	1074
BsrDI	GCAATG	1 cut(s)	1150
BsrFI	RCCGGY	3 cut(s)	364, 749, 1750
BsrI	ACTGG	7 cut(s)	186, 993, 1423, 1434, 1807, 1854, 1951
BssAI	RCCGGY	3 cut(s)	364, 749, 1750
BssECI	CCNNGG	5 cut(s)	402, 552, 786, 1623, 1800
BssHII	GCGCGC	1 cut(s)	1191
BssMI	GATC	8 cut(s)	385, 961, 970, 1174, 1221, 1390, 1759, 1792
BssT1I	CCWWGG	2 cut(s)	552, 786
Bst2UI	CCWGG	4 cut(s)	355, 813, 1063, 1802
Bst4CI	ACNGT	8 cut(s)	65, 286, 727, 830, 925, 1169, 1363, 1535
Bst6I	CTCTTC	1 cut(s)	1891
BstAPI	GCANNNNNTGC	1 cut(s)	413
BstBAI	YACGTR	2 cut(s)	87, 413
BstBI	TTCGAA	1 cut(s)	1894
BstC8I	GCNNGC	9 cut(s)	250, 366, 429, 745, 955, 1193, 1197, 1336, 1684
BstDEI	CTNAG	6 cut(s)	275, 371, 509, 558, 733, 1659
BstDSI	CCRYGG	3 cut(s)	402, 786, 1623
BstF5I	GGATG	2 cut(s)	1795, 1921
BstFNI	CGCG	5 cut(s)	404, 1106, 1193, 1199, 1686
BstHHI	GCGC	5 cut(s)	1108, 1193, 1195, 1201, 1215
BstKTI	GATC	8 cut(s)	388, 964, 973, 1177, 1224, 1393, 1762, 1795
BstMAI	GTCTC	3 cut(s)	594, 1074, 1948
BstMBI	GATC	8 cut(s)	385, 961, 970, 1174, 1221, 1390, 1759, 1792
BstMWI	GCNNNNNNNGC	5 cut(s)	413, 428, 1001, 1747, 1883
BstNI	CCWGG	4 cut(s)	355, 813, 1063, 1802
BstNSI	RCATGY	1 cut(s)	158
BstSCI	CCNGG	4 cut(s)	353, 811, 1061, 1800
BstSFI	CTRYAG	5 cut(s)	78, 432, 826, 1704, 1854
BstSLI	GKGCMC	1 cut(s)	1006
BstSNI	TACGTA	1 cut(s)	87
BstUI	CGCG	5 cut(s)	404, 1106, 1193, 1199, 1686
BstV1I	GCAGC	7 cut(s)	100, 418, 905, 927, 979, 1840, 1868
BstV2I	GAAGAC	1 cut(s)	1242
BstX2I	RGATCY	2 cut(s)	1390, 1759
BstXI	CCANNNNNNTGG	2 cut(s)	232, 1456
BstYI	RGATCY	2 cut(s)	1390, 1759
BsuI	GTATCC	1 cut(s)	641
BsuRI	GGCC	2 cut(s)	252, 1805
BtgI	CCRYGG	3 cut(s)	402, 786, 1623
BtrI	CACGTC	1 cut(s)	604
BtsCI	GGATG	2 cut(s)	1795, 1921
BtsI	GCAGTG	2 cut(s)	620, 1095
BtsIMutI	CAGTG	9 cut(s)	193, 282, 368, 620, 921, 1095, 1239, 1540, 1814
BveI	ACCTGC	2 cut(s)	442, 1858
Cac8I	GCNNGC	9 cut(s)	250, 366, 429, 745, 955, 1193, 1197, 1336, 1684
CaiI	CAGNNNCTG	2 cut(s)	918, 1832
CciI	TCATGA	2 cut(s)	1137, 1815
CfoI	GCGC	5 cut(s)	1108, 1193, 1195, 1201, 1215
Cfr10I	RCCGGY	3 cut(s)	364, 749, 1750
Cfr13I	GGNCC	4 cut(s)	815, 1169, 1601, 1804
Cfr42I	CCGCGG	1 cut(s)	405
CseI	GACGC	1 cut(s)	1675
CsiI	ACCWGGT	1 cut(s)	811
Csp6I	GTAC	4 cut(s)	455, 662, 1342, 1582
CspAI	ACCGGT	1 cut(s)	749
CviAII	CATG	8 cut(s)	58, 155, 161, 458, 787, 876, 1138, 1816
CviQI	GTAC	4 cut(s)	455, 662, 1342, 1582
DdeI	CTNAG	6 cut(s)	275, 371, 509, 558, 733, 1659
DpnI	GATC	8 cut(s)	387, 963, 972, 1176, 1223, 1392, 1761, 1794
DpnII	GATC	8 cut(s)	385, 961, 970, 1174, 1221, 1390, 1759, 1792
DraI	TTTAAA	1 cut(s)	570
DriI	GACNNNNNGTC	1 cut(s)	813
Eam1104I	CTCTTC	1 cut(s)	1891
Eam1105I	GACNNNNNGTC	1 cut(s)	813
EarI	CTCTTC	1 cut(s)	1891
Eco105I	TACGTA	1 cut(s)	87
Eco130I	CCWWGG	2 cut(s)	552, 786
Eco31I	GGTCTC	1 cut(s)	1074
Eco47I	GGWCC	3 cut(s)	815, 1169, 1601
Eco57I	CTGAAG	1 cut(s)	1650
EcoRI	GAATTC	1 cut(s)	1936
EcoRII	CCWGG	4 cut(s)	353, 811, 1061, 1800
EcoT14I	CCWWGG	2 cut(s)	552, 786
ErhI	CCWWGG	2 cut(s)	552, 786
Esp3I	CGTCTC	1 cut(s)	594
FaeI	CATG	8 cut(s)	61, 158, 164, 461, 790, 879, 1141, 1819
FalI	AAGNNNNNCTT	6 cut(s)	648, 680, 788, 820, 957, 989
FaqI	GGGAC	1 cut(s)	911
FatI	CATG	8 cut(s)	57, 154, 160, 457, 786, 875, 1137, 1815
FauI	CCCGC	2 cut(s)	1093, 1204
FbaI	TGATCA	1 cut(s)	385
FblI	GTMKAC	1 cut(s)	1610
FokI	GGATG	2 cut(s)	1782, 1928
FspBI	CTAG	2 cut(s)	428, 836
GlaI	GCGC	5 cut(s)	1107, 1192, 1194, 1200, 1214
GsaI	CCCAGC	2 cut(s)	426, 1498
GsuI	CTGGAG	1 cut(s)	169
HaeIII	GGCC	2 cut(s)	252, 1805
HapII	CCGG	3 cut(s)	365, 750, 1751
HgaI	GACGC	1 cut(s)	1675
HhaI	GCGC	5 cut(s)	1108, 1193, 1195, 1201, 1215
Hin1II	CATG	8 cut(s)	61, 158, 164, 461, 790, 879, 1141, 1819
Hin6I	GCGC	5 cut(s)	1106, 1191, 1193, 1199, 1213
HinP1I	GCGC	5 cut(s)	1106, 1191, 1193, 1199, 1213
HincII	GTYRAC	1 cut(s)	1611
HindII	GTYRAC	1 cut(s)	1611
HinfI	GANTC	8 cut(s)	782, 1015, 1148, 1463, 1595, 1634, 1693, 1735
HpaII	CCGG	3 cut(s)	365, 750, 1751
HphI	GGTGA	8 cut(s)	329, 872, 980, 1414, 1458, 1511, 1688, 1793
Hpy166II	GTNNAC	5 cut(s)	333, 615, 986, 1359, 1611
Hpy188I	TCNGA	8 cut(s)	42, 210, 561, 1293, 1486, 1669, 1828, 1948
Hpy188III	TCNNGA	7 cut(s)	818, 974, 1079, 1138, 1172, 1690, 1816
Hpy8I	GTNNAC	5 cut(s)	333, 615, 986, 1359, 1611
HpyAV	CCTTC	3 cut(s)	686, 1324, 1674
HpyCH4III	ACNGT	8 cut(s)	65, 286, 727, 830, 925, 1169, 1363, 1535
HpyCH4IV	ACGT	3 cut(s)	86, 412, 603
HpyF10VI	GCNNNNNNNGC	5 cut(s)	413, 428, 1001, 1747, 1883
HpyF3I	CTNAG	6 cut(s)	275, 371, 509, 558, 733, 1659
HpySE526I	ACGT	3 cut(s)	86, 412, 603
Hsp92II	CATG	8 cut(s)	61, 158, 164, 461, 790, 879, 1141, 1819
HspAI	GCGC	5 cut(s)	1106, 1191, 1193, 1199, 1213
KroI	GCCGGC	1 cut(s)	364
KroNI	GCCGGC	1 cut(s)	366
Ksp22I	TGATCA	1 cut(s)	385
KspI	CCGCGG	1 cut(s)	405
Kzo9I	GATC	8 cut(s)	385, 961, 970, 1174, 1221, 1390, 1759, 1792
LmnI	GCTCC	3 cut(s)	188, 938, 1072
Lsp1109I	GCAGC	7 cut(s)	100, 418, 905, 927, 979, 1840, 1868
LweI	GCATC	6 cut(s)	125, 235, 310, 351, 459, 885
MabI	ACCWGGT	1 cut(s)	811
MaeI	CTAG	2 cut(s)	428, 836
MaeII	ACGT	3 cut(s)	86, 412, 603
MaeIII	GTNAC	4 cut(s)	721, 908, 1464, 1781
MalI	GATC	8 cut(s)	387, 963, 972, 1176, 1223, 1392, 1761, 1794
MboI	GATC	8 cut(s)	385, 961, 970, 1174, 1221, 1390, 1759, 1792
MboII	GAAGA	8 cut(s)	111, 370, 1146, 1247, 1261, 1601, 1769, 1908
MfeI	CAATTG	1 cut(s)	755
MflI	RGATCY	2 cut(s)	1390, 1759
MhlI	GDGCHC	4 cut(s)	185, 208, 745, 1006
MlyI	GAGTC	2 cut(s)	1472, 1729
MnlI	CCTC	8 cut(s)	331, 583, 652, 1029, 1381, 1720, 1752, 1772
MroNI	GCCGGC	1 cut(s)	364
MseI	TTAA	7 cut(s)	107, 126, 569, 900, 948, 1227, 1556
MslI	CAYNNNNRTG	5 cut(s)	159, 1026, 1354, 1454, 1536
MspA1I	CMGCKG	3 cut(s)	274, 404, 918
MspI	CCGG	3 cut(s)	365, 750, 1751
MspR9I	CCNGG	4 cut(s)	355, 813, 1063, 1802
MunI	CAATTG	1 cut(s)	755
Mva1269I	GAATGC	2 cut(s)	1313, 1429
MvaI	CCWGG	4 cut(s)	355, 813, 1063, 1802
MvnI	CGCG	5 cut(s)	404, 1106, 1193, 1199, 1686
MwoI	GCNNNNNNNGC	5 cut(s)	413, 428, 1001, 1747, 1883
NaeI	GCCGGC	1 cut(s)	366
NcoI	CCATGG	1 cut(s)	786
NdeII	GATC	8 cut(s)	385, 961, 970, 1174, 1221, 1390, 1759, 1792
NgoMIV	GCCGGC	1 cut(s)	364
NheI	GCTAGC	1 cut(s)	427
NlaIII	CATG	8 cut(s)	61, 158, 164, 461, 790, 879, 1141, 1819
NmeAIII	GCCGAG	1 cut(s)	744
NmuCI	GTSAC	4 cut(s)	721, 908, 1464, 1781
NspI	RCATGY	1 cut(s)	158
NspV	TTCGAA	1 cut(s)	1894
OliI	CACNNNNGTG	2 cut(s)	1354, 1454
PagI	TCATGA	2 cut(s)	1137, 1815
PauI	GCGCGC	1 cut(s)	1191
PcsI	WCGNNNNNNNCGW	1 cut(s)	1230
PctI	GAATGC	2 cut(s)	1313, 1429
PdiI	GCCGGC	1 cut(s)	366
PfeI	GAWTC	6 cut(s)	782, 1015, 1148, 1595, 1634, 1693
PflFI	GACNNNGTC	1 cut(s)	397
PflMI	CCANNNNNTGG	1 cut(s)	330
PinAI	ACCGGT	1 cut(s)	749
PleI	GAGTC	2 cut(s)	1471, 1729
PpsI	GAGTC	2 cut(s)	1471, 1729
Ppu21I	YACGTR	2 cut(s)	87, 413
Psp6I	CCWGG	4 cut(s)	353, 811, 1061, 1800
PspFI	CCCAGC	2 cut(s)	422, 1494
PspGI	CCWGG	4 cut(s)	353, 811, 1061, 1800
PspPI	GGNCC	4 cut(s)	815, 1169, 1601, 1804
PstI	CTGCAG	2 cut(s)	436, 1858
PstNI	CAGNNNCTG	2 cut(s)	918, 1832
PsuI	RGATCY	2 cut(s)	1390, 1759
PsyI	GACNNNGTC	1 cut(s)	397
PteI	GCGCGC	1 cut(s)	1191
PvuII	CAGCTG	1 cut(s)	918
RsaI	GTAC	4 cut(s)	456, 663, 1343, 1583
RsaNI	GTAC	4 cut(s)	455, 662, 1342, 1582
RseI	CAYNNNNRTG	5 cut(s)	159, 1026, 1354, 1454, 1536
SacII	CCGCGG	1 cut(s)	405
SalI	GTCGAC	1 cut(s)	1609
SaqAI	TTAA	7 cut(s)	107, 126, 569, 900, 948, 1227, 1556
Sau3AI	GATC	8 cut(s)	385, 961, 970, 1174, 1221, 1390, 1759, 1792
Sau96I	GGNCC	4 cut(s)	815, 1169, 1601, 1804
SchI	GAGTC	2 cut(s)	1472, 1729
ScrFI	CCNGG	4 cut(s)	355, 813, 1063, 1802
SduI	GDGCHC	4 cut(s)	185, 208, 745, 1006
SexAI	ACCWGGT	1 cut(s)	811
SfaNI	GCATC	6 cut(s)	125, 235, 310, 351, 459, 885
SfcI	CTRYAG	5 cut(s)	78, 432, 826, 1704, 1854
Sfr303I	CCGCGG	1 cut(s)	405
SfuI	TTCGAA	1 cut(s)	1894
SgrBI	CCGCGG	1 cut(s)	405
SinI	GGWCC	3 cut(s)	815, 1169, 1601
SmiMI	CAYNNNNRTG	5 cut(s)	159, 1026, 1354, 1454, 1536
SmlI	CTYRAG	2 cut(s)	794, 1007
SmoI	CTYRAG	2 cut(s)	794, 1007
SnaBI	TACGTA	1 cut(s)	87
SsiI	CCGC	8 cut(s)	69, 272, 402, 404, 760, 1086, 1197, 1469
SspI	AATATT	1 cut(s)	1309
SspMI	CTAG	2 cut(s)	428, 836
StyD4I	CCNGG	4 cut(s)	353, 811, 1061, 1800
StyI	CCWWGG	2 cut(s)	552, 786
TaaI	ACNGT	8 cut(s)	65, 286, 727, 830, 925, 1169, 1363, 1535
TaiI	ACGT	3 cut(s)	89, 415, 606
TaqI	TCGA	5 cut(s)	1078, 1233, 1610, 1894, 1910
TauI	GCSGC	3 cut(s)	274, 407, 763
TfiI	GAWTC	6 cut(s)	782, 1015, 1148, 1595, 1634, 1693
Tru1I	TTAA	7 cut(s)	107, 126, 569, 900, 948, 1227, 1556
Tru9I	TTAA	7 cut(s)	107, 126, 569, 900, 948, 1227, 1556
TscAI	CASTG	9 cut(s)	193, 289, 375, 627, 928, 1095, 1246, 1540, 1814
TseFI	GTSAC	4 cut(s)	721, 908, 1464, 1781
TseI	GCWGC	7 cut(s)	113, 431, 915, 918, 992, 1853, 1856
Tsp45I	GTSAC	4 cut(s)	721, 908, 1464, 1781
TspDTI	ATGAA	9 cut(s)	46, 279, 1140, 1178, 1247, 1556, 1608, 1804, 1832
TspGWI	ACGGA	1 cut(s)	1147
TspRI	CASTG	9 cut(s)	193, 289, 375, 627, 928, 1095, 1246, 1540, 1814
Tth111I	GACNNNGTC	1 cut(s)	397
Van91I	CCANNNNNTGG	1 cut(s)	330
VpaK11BI	GGWCC	3 cut(s)	815, 1169, 1601
XapI	RAATTY	6 cut(s)	571, 1051, 1502, 1819, 1889, 1936
XceI	RCATGY	1 cut(s)	158
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1390, 1621
XmiI	GTMKAC	1 cut(s)	1610
XspI	CTAG	2 cut(s)	428, 836

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.