RLG00000013900

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0004842
Physical Location & Seq
Forward (+)
43945562 .. 43951839
6278 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013900

Sequence Viewer

Length: 2040 bp
ATGGCTGACTTCTGCCGAAATGGGTTCAGTTTTCTTGCTCTGAAAACCTTATCATTCATGCACAGTACCGGTGTTCCTATAGATACGTATGCTTTGTGTAGTTCTTTAACTGCTGCATCTTCTATTAAAGATGTTGGCTTCGGTAGAAAGATACATGCCCATGTGGTAAAGTCAGGCTGGTGCTCCAGTGTTTTTGTTGGGAGTGCTCTGATTGACTTGTATGCCAAGTCATTGGTTATAGGAGATGCAGACCGAGTGTTTGATGAAATGCCGCTGAGAAACGCTGTTTGTGCAAACGCACTTTTATCAGGTTATGGTGATGCCAAGTTGTGGACAGAGGGAGTAGAATTGATCCGGAAGATGCCGGCACTGAGTTTGGAGTATGATCACTTCACATTGTCCGCGGCCTTACGTGCCTGTGCTGGGCTAGCTGCAATTGAATTGGGTAGGCAGGTACATGGTTATTTGATCCGTTCGGTTTATGATGTGGGAAGTGATGTGTTTCTGCTGAGTTCATTGATTGAAATGTATGGTAAATGTGGGCTGGTAGCCAAGGCTCAGAAAGTTTTCAATTTTGATGGAAAAGGAGAGGGGAAAAGAGATGTGGTTATGTGGACTTCACTGCTTGGTGTGTATGGTAGAAATGGATACTATAAAGAGGTAATTGAACTATTCAAAGATATGTTGATGGAAGGAATTAGCCCAGATGGGGTGGCATTTGTGACAGTCATCTCTGCTTGTGCTCACACCGGTCAATTGCAGCTCGGCATTGAGTATTTTGAATCCATGGAACTCAAGTTCAGCTTGAAACCAGGTCCAGAACACTACAGCTGTCTAGTTGATTTGCTGTGTAGAGCTGGTGAATTGGGCAAGGCGTGGAAGCTCATTGATGAGATGCTTAATAAAGGTCACAGCAGCTGCACTGTCCCTATGTGGGGAGCTTTGCTTAATGCTTGCAAAGATCATGGTGATCTTGAATTGGGTAAACTGGCTGCTCAAAGGGCACTTGAGTTGAATCCTCATAATGACGGTTTTTATGTTTTGCTATCAAATTTATATGCCAGGTTCGGAATGTGGCACGAGATTAATCATTTGAGGGAGTTAATGAAAGAAAAGGGGTTAAGGAAAGATGTCGGATATAGCCGTATTCAAGGGAGCTTCGAGACCGCAGTAGTCTGCAACTTCGCGCCAGAAACCCTAAACGAGAGAAGAGCTCTCATGAGCAATAATTCATCTCCCGTAATGAACGGTCCAGATCAGCCTGACACAAGCGCGCCCACGCCCAAACCACAGCGCACCAAGATGGTTAAACTCGAAGACACTGAAAAGAAGATTTTTCATAAGAAACTCAAAGATGTTGAGATTAGTGTTCCGATAGTGTATGGCAATATTGCATTCTGGCTCGGTAAGAAGGCAAGCGAGTACCAATCACATAAGTGGACTGTGTATGTTCGTGGGGCCACCAATGAGGATCTGGGAGTGGTGATAAAGCGTGTTGTTTTCCAGTTGCATTCCAGTTTCAATAATCCCACAAGGGTGGTTGAGTCACCGCCATTTGAGTTATCCGAATGTGGCTGGGGTGAATTTGAAATCGCAATTACACTATTTTTCCACAGTGATGTTTGTGAGAAGCCATTAAACTTATTTCATCATTTGAAGTTGTACCCAGAAGATGAATCTGGTCCTATGTCGACCAAGAAACCCGTGGTCGTGGAATCCTATGATGAGATTGTGTTCCCTGAGCCTTCAGAGAGTTTTTTAGCTCGCGTCCAGAATCACCCTGCTATAGCCTCCCCCAGATTACCTGCTGGTTTGACTCTGCTTCCTCCTGTGCCAGTTGAAGATCCAAGTAAAAGAAAGAGAGGTGACACAAAAGATCATCCCCTGACCCAGTGGTTCATGAATTTTTCAGAAGCTGATGAGCTTCTACAACTGGCTGCAGCTCGTCAGCAGGTTCAAGCTCATATTGCTAAATTTCGAAGAGAGATAAGTTCGATGGATGTGCAACAACAACAAGTGAATTCTGTCTCCGACCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

680

Amino Acids

75.62

Weight (kDa)

6.33

Isoelectric Point (pI)

43.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 200 - 249 2.7e-10 PPR repeat family
PPR PF01535 203 - 233 3.8e-07 PPR repeat
PPR_1 PF12854 270 - 299 4.1e-06 PPR repeat
E_motif PF20431 322 - 384 1.7e-18 E motif
YEATS PF03366 476 - 555 6.2e-30 YEATS family
pYEATS PF20305 479 - 539 2.1e-10 prokaryotic YEATS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 442, 1813, 1942
AccB7I CCANNNNNTGG 1 cut(s) 330
AccI GTMKAC 1 cut(s) 1691
AccII CGCG 4 cut(s) 404, 1187, 1274, 1767
AccIII TCCGGA 1 cut(s) 354
AciI CCGC 5 cut(s) 272, 402, 404, 1167, 1550
AclWI GGATC 4 cut(s) 346, 463, 1479, 1838
AcsI RAATTY 5 cut(s) 1051, 1583, 1903, 1973, 2020
AcuI CTGAAG 1 cut(s) 1731
AfaI GTAC 4 cut(s) 67, 456, 1424, 1664
AfiI CCNNNNNNNGG 5 cut(s) 330, 423, 709, 934, 935
AgeI ACCGGT 2 cut(s) 68, 749
AjnI CCWGG 2 cut(s) 811, 1061
AleI CACNNNNGTG 2 cut(s) 1435, 1535
AloI GAACNNNNNNTCC 2 cut(s) 782, 814
Alw21I GWGCWC 4 cut(s) 185, 208, 745, 1216
Alw26I GTCTC 2 cut(s) 1157, 2032
AlwI GGATC 4 cut(s) 346, 463, 1479, 1838
AlwNI CAGNNNCTG 2 cut(s) 918, 1916
Aor13HI TCCGGA 1 cut(s) 354
AoxI GGCC 2 cut(s) 405, 1458
ApeKI GCWGC 8 cut(s) 113, 431, 760, 915, 918, 992, 1937, 1940
ApoI RAATTY 5 cut(s) 1051, 1583, 1903, 1973, 2020
ArsI GACNNNNNNTTYG 2 cut(s) 242, 274
AseI ATTAAT 1 cut(s) 1086
AsiGI ACCGGT 2 cut(s) 68, 749
Asp700I GAANNNNTTC 1 cut(s) 566
AspLEI GCGC 4 cut(s) 1189, 1274, 1276, 1296
AspS9I GGNCC 4 cut(s) 815, 1250, 1458, 1682
AsuHPI GGTGA 8 cut(s) 329, 872, 980, 1495, 1539, 1592, 1769, 1877
AsuII TTCGAA 1 cut(s) 1978
AsuNHI GCTAGC 1 cut(s) 427
AvaII GGWCC 3 cut(s) 815, 1250, 1682
BaeGI GKGCMC 1 cut(s) 1006
BanII GRGCYC 1 cut(s) 1216
BarI GAAGNNNNNNTAC 2 cut(s) 374, 406
BauI CACGAG 1 cut(s) 1079
BbsI GAAGAC 1 cut(s) 1323
Bbv12I GWGCWC 4 cut(s) 185, 208, 745, 1216
BbvI GCAGC 8 cut(s) 100, 418, 772, 905, 927, 979, 1924, 1952
BccI CCATC 5 cut(s) 572, 682, 701, 1297, 1990
BceAI ACGGC 1 cut(s) 1128
BcgI CGANNNNNNTGC 2 cut(s) 1984, 2018
BciT130I CCWGG 2 cut(s) 813, 1063
BciVI GTATCC 1 cut(s) 641
BclI TGATCA 1 cut(s) 385
BcoDI GTCTC 2 cut(s) 1157, 2032
BfaI CTAG 2 cut(s) 428, 836
BfmI CTRYAG 4 cut(s) 78, 826, 1785, 1938
BfuAI ACCTGC 3 cut(s) 442, 1813, 1942
BfuI GTATCC 1 cut(s) 641
Bme1390I CCNGG 2 cut(s) 813, 1063
Bme18I GGWCC 3 cut(s) 815, 1250, 1682
BmgT120I GGNCC 4 cut(s) 815, 1250, 1458, 1682
BmiI GGNNCC 1 cut(s) 1459
BmrFI CCNGG 2 cut(s) 813, 1063
BmrI ACTGGG 1 cut(s) 1885
BmsI GCATC 5 cut(s) 125, 235, 310, 351, 885
BmtI GCTAGC 1 cut(s) 431
BmuI ACTGGG 1 cut(s) 1885
BpiI GAAGAC 1 cut(s) 1323
BplI GAGNNNNNCTC 2 cut(s) 1198, 1230
BpmI CTGGAG 1 cut(s) 169
Bpu10I CCTNAGC 1 cut(s) 1740
Bpu14I TTCGAA 1 cut(s) 1978
BpuEI CTTGAG 2 cut(s) 779, 1028
BsaAI YACGTR 2 cut(s) 87, 413
BsaI GGTCTC 1 cut(s) 1157
BsaJI CCNNGG 4 cut(s) 402, 552, 786, 1704
BsaWI WCCGGW 3 cut(s) 68, 354, 749
Bsc4I CCNNNNNNNGG 5 cut(s) 330, 423, 709, 934, 935
Bse118I RCCGGY 3 cut(s) 68, 364, 749
Bse1I ACTGG 8 cut(s) 186, 993, 1504, 1515, 1835, 1891, 1938, 2035
BseAI TCCGGA 1 cut(s) 354
BseBI CCWGG 2 cut(s) 813, 1063
BseDI CCNNGG 4 cut(s) 402, 552, 786, 1704
BseGI GGATG 2 cut(s) 1879, 2005
BseLI CCNNNNNNNGG 5 cut(s) 330, 423, 709, 934, 935
BseMII CTCAG 5 cut(s) 266, 362, 500, 572, 1731
BseNI ACTGG 8 cut(s) 186, 993, 1504, 1515, 1835, 1891, 1938, 2035
BsePI GCGCGC 1 cut(s) 1272
BseSI GKGCMC 1 cut(s) 1006
BseXI GCAGC 8 cut(s) 100, 418, 772, 905, 927, 979, 1924, 1952
BseYI CCCAGC 2 cut(s) 422, 1575
BsgI GTGCAG 1 cut(s) 904
Bsh1236I CGCG 4 cut(s) 404, 1187, 1274, 1767
BshFI GGCC 2 cut(s) 407, 1460
BshTI ACCGGT 2 cut(s) 68, 749
BsiHKAI GWGCWC 4 cut(s) 185, 208, 745, 1216
BsiSI CCGG 4 cut(s) 69, 355, 365, 750
BslFI GGGAC 1 cut(s) 911
BslI CCNNNNNNNGG 5 cut(s) 330, 423, 709, 934, 935
BsmAI GTCTC 2 cut(s) 1157, 2032
BsmFI GGGAC 1 cut(s) 911
BsmI GAATGC 2 cut(s) 1394, 1510
BsnI GGCC 2 cut(s) 407, 1460
Bso31I GGTCTC 1 cut(s) 1157
Bsp119I TTCGAA 1 cut(s) 1978
Bsp1286I GDGCHC 5 cut(s) 185, 208, 745, 1006, 1216
Bsp13I TCCGGA 1 cut(s) 354
Bsp143I GATC 9 cut(s) 351, 385, 468, 961, 970, 1255, 1471, 1843, 1876
Bsp19I CCATGG 1 cut(s) 786
BspACI CCGC 5 cut(s) 272, 402, 404, 1167, 1550
BspANI GGCC 2 cut(s) 407, 1460
BspCNI CTCAG 5 cut(s) 267, 363, 501, 571, 1732
BspEI TCCGGA 1 cut(s) 354
BspFNI CGCG 4 cut(s) 404, 1187, 1274, 1767
BspHI TCATGA 2 cut(s) 1218, 1899
BspLI GGNNCC 1 cut(s) 1459
BspMAI CTGCAG 1 cut(s) 1942
BspMI ACCTGC 3 cut(s) 442, 1813, 1942
BspOI GCTAGC 1 cut(s) 431
BspPI GGATC 4 cut(s) 346, 463, 1479, 1838
BspQI GCTCTTC 1 cut(s) 1204
BspT104I TTCGAA 1 cut(s) 1978
BspTNI GGTCTC 1 cut(s) 1157
BsrFI RCCGGY 3 cut(s) 68, 364, 749
BsrI ACTGG 8 cut(s) 186, 993, 1504, 1515, 1835, 1891, 1938, 2035
BssAI RCCGGY 3 cut(s) 68, 364, 749
BssECI CCNNGG 4 cut(s) 402, 552, 786, 1704
BssHII GCGCGC 1 cut(s) 1272
BssMI GATC 9 cut(s) 351, 385, 468, 961, 970, 1255, 1471, 1843, 1876
BssSI CACGAG 1 cut(s) 1079
BssT1I CCWWGG 2 cut(s) 552, 786
Bst2BI CACGAG 1 cut(s) 1079
Bst2UI CCWGG 2 cut(s) 813, 1063
Bst4CI ACNGT 7 cut(s) 65, 727, 925, 1031, 1250, 1444, 1616
Bst6I CTCTTC 2 cut(s) 1204, 1975
BstBAI YACGTR 2 cut(s) 87, 413
BstBI TTCGAA 1 cut(s) 1978
BstC8I GCNNGC 6 cut(s) 366, 429, 955, 1274, 1417, 1765
BstDEI CTNAG 5 cut(s) 275, 371, 509, 558, 1740
BstDSI CCRYGG 3 cut(s) 402, 786, 1704
BstF5I GGATG 2 cut(s) 1879, 2005
BstFNI CGCG 4 cut(s) 404, 1187, 1274, 1767
BstHHI GCGC 4 cut(s) 1189, 1274, 1276, 1296
BstKTI GATC 9 cut(s) 354, 388, 471, 964, 973, 1258, 1474, 1846, 1879
BstMAI GTCTC 2 cut(s) 1157, 2032
BstMBI GATC 9 cut(s) 351, 385, 468, 961, 970, 1255, 1471, 1843, 1876
BstMWI GCNNNNNNNGC 5 cut(s) 290, 413, 428, 1001, 1967
BstNI CCWGG 2 cut(s) 813, 1063
BstNSI RCATGY 1 cut(s) 158
BstSCI CCNGG 2 cut(s) 811, 1061
BstSFI CTRYAG 4 cut(s) 78, 826, 1785, 1938
BstSLI GKGCMC 1 cut(s) 1006
BstSNI TACGTA 1 cut(s) 87
BstUI CGCG 4 cut(s) 404, 1187, 1274, 1767
BstV1I GCAGC 8 cut(s) 100, 418, 772, 905, 927, 979, 1924, 1952
BstV2I GAAGAC 1 cut(s) 1323
BstX2I RGATCY 2 cut(s) 1471, 1843
BstXI CCANNNNNNTGG 2 cut(s) 232, 1537
BstYI RGATCY 2 cut(s) 1471, 1843
BsuI GTATCC 1 cut(s) 641
BsuRI GGCC 2 cut(s) 407, 1460
BtgI CCRYGG 3 cut(s) 402, 786, 1704
BtsCI GGATG 2 cut(s) 1879, 2005
BtsI GCAGTG 1 cut(s) 620
BtsIMutI CAGTG 7 cut(s) 193, 368, 620, 921, 1320, 1621, 1898
BveI ACCTGC 3 cut(s) 442, 1813, 1942
Cac8I GCNNGC 6 cut(s) 366, 429, 955, 1274, 1417, 1765
CaiI CAGNNNCTG 2 cut(s) 918, 1916
CciI TCATGA 2 cut(s) 1218, 1899
CfoI GCGC 4 cut(s) 1189, 1274, 1276, 1296
Cfr10I RCCGGY 3 cut(s) 68, 364, 749
Cfr13I GGNCC 4 cut(s) 815, 1250, 1458, 1682
Cfr42I CCGCGG 1 cut(s) 405
CseI GACGC 1 cut(s) 1756
CsiI ACCWGGT 1 cut(s) 811
Csp6I GTAC 4 cut(s) 66, 455, 1423, 1663
CspAI ACCGGT 2 cut(s) 68, 749
CviAII CATG 8 cut(s) 58, 155, 161, 458, 787, 965, 1219, 1900
CviQI GTAC 4 cut(s) 66, 455, 1423, 1663
DdeI CTNAG 5 cut(s) 275, 371, 509, 558, 1740
DpnI GATC 9 cut(s) 353, 387, 470, 963, 972, 1257, 1473, 1845, 1878
DpnII GATC 9 cut(s) 351, 385, 468, 961, 970, 1255, 1471, 1843, 1876
Eam1104I CTCTTC 2 cut(s) 1204, 1975
EarI CTCTTC 2 cut(s) 1204, 1975
Ecl136II GAGCTC 1 cut(s) 1214
Eco105I TACGTA 1 cut(s) 87
Eco130I CCWWGG 2 cut(s) 552, 786
Eco24I GRGCYC 1 cut(s) 1216
Eco31I GGTCTC 1 cut(s) 1157
Eco47I GGWCC 3 cut(s) 815, 1250, 1682
Eco53kI GAGCTC 1 cut(s) 1214
Eco57I CTGAAG 1 cut(s) 1731
EcoICRI GAGCTC 1 cut(s) 1214
EcoRI GAATTC 1 cut(s) 2020
EcoRII CCWGG 2 cut(s) 811, 1061
EcoT14I CCWWGG 2 cut(s) 552, 786
EcoT38I GRGCYC 1 cut(s) 1216
ErhI CCWWGG 2 cut(s) 552, 786
FaeI CATG 8 cut(s) 61, 158, 164, 461, 790, 968, 1222, 1903
FalI AAGNNNNNCTT 2 cut(s) 788, 820
FaqI GGGAC 1 cut(s) 911
FatI CATG 8 cut(s) 57, 154, 160, 457, 786, 964, 1218, 1899
FbaI TGATCA 1 cut(s) 385
FblI GTMKAC 1 cut(s) 1691
FokI GGATG 2 cut(s) 1866, 2012
FriOI GRGCYC 1 cut(s) 1216
FspBI CTAG 2 cut(s) 428, 836
GlaI GCGC 4 cut(s) 1188, 1273, 1275, 1295
GsaI CCCAGC 2 cut(s) 426, 1579
GsuI CTGGAG 1 cut(s) 169
HaeIII GGCC 2 cut(s) 407, 1460
HapII CCGG 4 cut(s) 69, 355, 365, 750
HgaI GACGC 1 cut(s) 1756
HhaI GCGC 4 cut(s) 1189, 1274, 1276, 1296
Hin1II CATG 8 cut(s) 61, 158, 164, 461, 790, 968, 1222, 1903
Hin6I GCGC 4 cut(s) 1187, 1272, 1274, 1294
HinP1I GCGC 4 cut(s) 1187, 1272, 1274, 1294
HincII GTYRAC 1 cut(s) 1692
HindII GTYRAC 1 cut(s) 1692
HinfI GANTC 7 cut(s) 782, 1015, 1544, 1676, 1715, 1774, 1816
HpaII CCGG 4 cut(s) 69, 355, 365, 750
HphI GGTGA 8 cut(s) 329, 872, 980, 1495, 1539, 1592, 1769, 1877
Hpy166II GTNNAC 5 cut(s) 333, 615, 986, 1440, 1692
Hpy188III TCNNGA 8 cut(s) 355, 818, 974, 1162, 1219, 1253, 1771, 1900
Hpy8I GTNNAC 5 cut(s) 333, 615, 986, 1440, 1692
HpyAV CCTTC 3 cut(s) 686, 1405, 1755
HpyCH4III ACNGT 7 cut(s) 65, 727, 925, 1031, 1250, 1444, 1616
HpyCH4IV ACGT 2 cut(s) 86, 412
HpyF10VI GCNNNNNNNGC 5 cut(s) 290, 413, 428, 1001, 1967
HpyF3I CTNAG 5 cut(s) 275, 371, 509, 558, 1740
HpySE526I ACGT 2 cut(s) 86, 412
Hsp92II CATG 8 cut(s) 61, 158, 164, 461, 790, 968, 1222, 1903
HspAI GCGC 4 cut(s) 1187, 1272, 1274, 1294
Kpn2I TCCGGA 1 cut(s) 354
KroI GCCGGC 1 cut(s) 364
KroNI GCCGGC 1 cut(s) 366
Ksp22I TGATCA 1 cut(s) 385
KspI CCGCGG 1 cut(s) 405
Kzo9I GATC 9 cut(s) 351, 385, 468, 961, 970, 1255, 1471, 1843, 1876
LguI GCTCTTC 1 cut(s) 1204
LmnI GCTCC 3 cut(s) 188, 938, 1155
Lsp1109I GCAGC 8 cut(s) 100, 418, 772, 905, 927, 979, 1924, 1952
LweI GCATC 5 cut(s) 125, 235, 310, 351, 885
MabI ACCWGGT 1 cut(s) 811
MaeI CTAG 2 cut(s) 428, 836
MaeII ACGT 2 cut(s) 86, 412
MaeIII GTNAC 4 cut(s) 721, 908, 1545, 1865
MalI GATC 9 cut(s) 353, 387, 470, 963, 972, 1257, 1473, 1845, 1878
MboI GATC 9 cut(s) 351, 385, 468, 961, 970, 1255, 1471, 1843, 1876
MboII GAAGA 8 cut(s) 111, 370, 1221, 1328, 1342, 1682, 1853, 1992
MfeI CAATTG 2 cut(s) 435, 755
MflI RGATCY 2 cut(s) 1471, 1843
MhlI GDGCHC 5 cut(s) 185, 208, 745, 1006, 1216
MlyI GAGTC 2 cut(s) 1553, 1810
MmeI TCCRAC 1 cut(s) 1114
MnlI CCTC 9 cut(s) 331, 583, 652, 1029, 1089, 1462, 1801, 1836, 1856
MroI TCCGGA 1 cut(s) 354
MroNI GCCGGC 1 cut(s) 364
MroXI GAANNNNTTC 1 cut(s) 566
MseI TTAA 9 cut(s) 107, 126, 900, 948, 1086, 1103, 1121, 1308, 1637
MslI CAYNNNNRTG 5 cut(s) 159, 1301, 1435, 1535, 1617
MspA1I CMGCKG 4 cut(s) 274, 404, 831, 918
MspI CCGG 4 cut(s) 69, 355, 365, 750
MspR9I CCNGG 2 cut(s) 813, 1063
MunI CAATTG 2 cut(s) 435, 755
Mva1269I GAATGC 2 cut(s) 1394, 1510
MvaI CCWGG 2 cut(s) 813, 1063
MvnI CGCG 4 cut(s) 404, 1187, 1274, 1767
MwoI GCNNNNNNNGC 5 cut(s) 290, 413, 428, 1001, 1967
NaeI GCCGGC 1 cut(s) 366
NcoI CCATGG 1 cut(s) 786
NdeII GATC 9 cut(s) 351, 385, 468, 961, 970, 1255, 1471, 1843, 1876
NgoMIV GCCGGC 1 cut(s) 364
NheI GCTAGC 1 cut(s) 427
NlaIII CATG 8 cut(s) 61, 158, 164, 461, 790, 968, 1222, 1903
NlaIV GGNNCC 1 cut(s) 1459
NmeAIII GCCGAG 1 cut(s) 744
NmuCI GTSAC 4 cut(s) 721, 908, 1545, 1865
NspI RCATGY 1 cut(s) 158
NspV TTCGAA 1 cut(s) 1978
OliI CACNNNNGTG 2 cut(s) 1435, 1535
PagI TCATGA 2 cut(s) 1218, 1899
PauI GCGCGC 1 cut(s) 1272
PciSI GCTCTTC 1 cut(s) 1204
PctI GAATGC 2 cut(s) 1394, 1510
PdiI GCCGGC 1 cut(s) 366
PdmI GAANNNNTTC 1 cut(s) 566
PfeI GAWTC 5 cut(s) 782, 1015, 1676, 1715, 1774
PflMI CCANNNNNTGG 1 cut(s) 330
PinAI ACCGGT 2 cut(s) 68, 749
PleI GAGTC 2 cut(s) 1552, 1810
PpsI GAGTC 2 cut(s) 1552, 1810
Ppu21I YACGTR 2 cut(s) 87, 413
PshBI ATTAAT 1 cut(s) 1086
Psp124BI GAGCTC 1 cut(s) 1216
Psp6I CCWGG 2 cut(s) 811, 1061
PspFI CCCAGC 2 cut(s) 422, 1575
PspGI CCWGG 2 cut(s) 811, 1061
PspN4I GGNNCC 1 cut(s) 1459
PspPI GGNCC 4 cut(s) 815, 1250, 1458, 1682
PstI CTGCAG 1 cut(s) 1942
PstNI CAGNNNCTG 2 cut(s) 918, 1916
PsuI RGATCY 2 cut(s) 1471, 1843
PteI GCGCGC 1 cut(s) 1272
PvuII CAGCTG 2 cut(s) 831, 918
RsaI GTAC 4 cut(s) 67, 456, 1424, 1664
RsaNI GTAC 4 cut(s) 66, 455, 1423, 1663
RseI CAYNNNNRTG 5 cut(s) 159, 1301, 1435, 1535, 1617
SacI GAGCTC 1 cut(s) 1216
SacII CCGCGG 1 cut(s) 405
SalI GTCGAC 1 cut(s) 1690
SapI GCTCTTC 1 cut(s) 1204
SaqAI TTAA 9 cut(s) 107, 126, 900, 948, 1086, 1103, 1121, 1308, 1637
Sau3AI GATC 9 cut(s) 351, 385, 468, 961, 970, 1255, 1471, 1843, 1876
Sau96I GGNCC 4 cut(s) 815, 1250, 1458, 1682
SchI GAGTC 2 cut(s) 1553, 1810
ScrFI CCNGG 2 cut(s) 813, 1063
SduI GDGCHC 5 cut(s) 185, 208, 745, 1006, 1216
SexAI ACCWGGT 1 cut(s) 811
SfaNI GCATC 5 cut(s) 125, 235, 310, 351, 885
SfcI CTRYAG 4 cut(s) 78, 826, 1785, 1938
Sfr303I CCGCGG 1 cut(s) 405
SfuI TTCGAA 1 cut(s) 1978
SgrBI CCGCGG 1 cut(s) 405
SinI GGWCC 3 cut(s) 815, 1250, 1682
SmiMI CAYNNNNRTG 5 cut(s) 159, 1301, 1435, 1535, 1617
SmlI CTYRAG 2 cut(s) 794, 1007
SmoI CTYRAG 2 cut(s) 794, 1007
SnaBI TACGTA 1 cut(s) 87
SsiI CCGC 5 cut(s) 272, 402, 404, 1167, 1550
SspI AATATT 1 cut(s) 1390
SspMI CTAG 2 cut(s) 428, 836
SstI GAGCTC 1 cut(s) 1216
StyD4I CCNGG 2 cut(s) 811, 1061
StyI CCWWGG 2 cut(s) 552, 786
TaaI ACNGT 7 cut(s) 65, 727, 925, 1031, 1250, 1444, 1616
TaiI ACGT 2 cut(s) 89, 415
TaqI TCGA 5 cut(s) 1161, 1314, 1691, 1978, 1994
TaqII GACCGA 1 cut(s) 267
TauI GCSGC 2 cut(s) 274, 407
TfiI GAWTC 5 cut(s) 782, 1015, 1676, 1715, 1774
Tru1I TTAA 9 cut(s) 107, 126, 900, 948, 1086, 1103, 1121, 1308, 1637
Tru9I TTAA 9 cut(s) 107, 126, 900, 948, 1086, 1103, 1121, 1308, 1637
TscAI CASTG 7 cut(s) 193, 375, 627, 928, 1327, 1621, 1898
TseFI GTSAC 4 cut(s) 721, 908, 1545, 1865
TseI GCWGC 8 cut(s) 113, 431, 760, 915, 918, 992, 1937, 1940
Tsp45I GTSAC 4 cut(s) 721, 908, 1545, 1865
TspGWI ACGGA 1 cut(s) 461
TspRI CASTG 7 cut(s) 193, 375, 627, 928, 1327, 1621, 1898
Van91I CCANNNNNTGG 1 cut(s) 330
VpaK11BI GGWCC 3 cut(s) 815, 1250, 1682
VspI ATTAAT 1 cut(s) 1086
XapI RAATTY 5 cut(s) 1051, 1583, 1903, 1973, 2020
XceI RCATGY 1 cut(s) 158
XcmI CCANNNNNNNNNTGG 2 cut(s) 1471, 1702
XmiI GTMKAC 1 cut(s) 1691
XmnI GAANNNNTTC 1 cut(s) 566
XspI CTAG 2 cut(s) 428, 836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.