EF hand
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g15920 FvH4_2g34550 |
| prunus_persica | Prupe.1G437300_v2.0.a1 Prupe.7G134600_v2.0.a1 |
| pyrus_communis | pycom02g13750 pycom08g08390 pycom15g24590 |
| rosa_chinensis | RchiOBHm_Chr2g0105311 RchiOBHm_Chr5g0048521 RchiOBHm_Chr5g0048531 RchiOBHm_Chr6g0307621 RchiOBHm_Chr6g0307791 |
| rosa_laevigata | RLG00000017415 |
| rosa_multiflora | Rmu_sc0000031.1_g000032 Rmu_sc0001407.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00033280 Rroxscaffold_2G00138310 |
| rosa_rugosa | Rorug02G0127500 Rorug06G0361000 |
| rosa_samantha | Rh2AG178100 Rh2BG186500 Rh2CG182700 Rh2DG184100 Rh5AG319000 Rh5BG329200 Rh5BG329400 Rh5CG355100 Rh5DG340400 Rh5DG340600 Rh6AG470000 Rh6BG480500 Rh6CG486200 Rh6DG472600 |
| rosa_wichuraiana | Rw5G029830 Rw5G029970 Rw6G041040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 216 |
| AciI | CCGC | 3 cut(s) | 202, 214, 225 |
| AclWI | GGATC | 1 cut(s) | 359 |
| AcoI | YGGCCR | 1 cut(s) | 178 |
| AcsI | RAATTY | 1 cut(s) | 158 |
| AcuI | CTGAAG | 1 cut(s) | 173 |
| AflIII | ACRYGT | 1 cut(s) | 118 |
| AgsI | TTSAA | 2 cut(s) | 142, 244 |
| AjnI | CCWGG | 1 cut(s) | 204 |
| AluBI | AGCT | 1 cut(s) | 58 |
| AluI | AGCT | 1 cut(s) | 58 |
| AlwI | GGATC | 1 cut(s) | 359 |
| AoxI | GGCC | 1 cut(s) | 178 |
| ApoI | RAATTY | 1 cut(s) | 158 |
| AsuHPI | GGTGA | 1 cut(s) | 308 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 280, 313 |
| BccI | CCATC | 2 cut(s) | 104, 170 |
| BceAI | ACGGC | 1 cut(s) | 165 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 82, 116 |
| BciT130I | CCWGG | 1 cut(s) | 206 |
| BciVI | GTATCC | 2 cut(s) | 52, 281 |
| BfaI | CTAG | 1 cut(s) | 105 |
| BfmI | CTRYAG | 1 cut(s) | 267 |
| BfuI | GTATCC | 2 cut(s) | 52, 281 |
| Bme1390I | CCNGG | 1 cut(s) | 206 |
| BmrFI | CCNGG | 1 cut(s) | 206 |
| BsaBI | GATNNNNATC | 1 cut(s) | 276 |
| BsaJI | CCNNGG | 2 cut(s) | 7, 132 |
| Bse118I | RCCGGY | 1 cut(s) | 221 |
| Bse8I | GATNNNNATC | 1 cut(s) | 276 |
| BseBI | CCWGG | 1 cut(s) | 206 |
| BseDI | CCNNGG | 2 cut(s) | 7, 132 |
| BseJI | GATNNNNATC | 1 cut(s) | 276 |
| BseRI | GAGGAG | 1 cut(s) | 149 |
| BshFI | GGCC | 1 cut(s) | 180 |
| BsiSI | CCGG | 1 cut(s) | 222 |
| BsnI | GGCC | 1 cut(s) | 180 |
| Bsp143I | GATC | 3 cut(s) | 3, 263, 351 |
| BspACI | CCGC | 3 cut(s) | 202, 214, 225 |
| BspANI | GGCC | 1 cut(s) | 180 |
| BspMAI | CTGCAG | 1 cut(s) | 271 |
| BspPI | GGATC | 1 cut(s) | 359 |
| BsrBI | CCGCTC | 1 cut(s) | 216 |
| BsrFI | RCCGGY | 1 cut(s) | 221 |
| BssAI | RCCGGY | 1 cut(s) | 221 |
| BssECI | CCNNGG | 2 cut(s) | 7, 132 |
| BssMI | GATC | 3 cut(s) | 3, 263, 351 |
| BssT1I | CCWWGG | 1 cut(s) | 7 |
| Bst2UI | CCWGG | 1 cut(s) | 206 |
| BstC8I | GCNNGC | 1 cut(s) | 251 |
| BstKTI | GATC | 3 cut(s) | 6, 266, 354 |
| BstMBI | GATC | 3 cut(s) | 3, 263, 351 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 18, 186, 222 |
| BstNI | CCWGG | 1 cut(s) | 206 |
| BstSCI | CCNGG | 1 cut(s) | 204 |
| BstSFI | CTRYAG | 1 cut(s) | 267 |
| BsuI | GTATCC | 2 cut(s) | 52, 281 |
| BsuRI | GGCC | 1 cut(s) | 180 |
| Cac8I | GCNNGC | 1 cut(s) | 251 |
| Cfr10I | RCCGGY | 1 cut(s) | 221 |
| CseI | GACGC | 1 cut(s) | 237 |
| CviJI | RGCY | 5 cut(s) | 12, 58, 151, 180, 209 |
| CviKI_1 | RGCY | 5 cut(s) | 12, 58, 151, 180, 209 |
| DpnI | GATC | 3 cut(s) | 5, 265, 353 |
| DpnII | GATC | 3 cut(s) | 3, 263, 351 |
| EaeI | YGGCCR | 1 cut(s) | 178 |
| EciI | GGCGGA | 2 cut(s) | 191, 240 |
| Eco130I | CCWWGG | 1 cut(s) | 7 |
| Eco57I | CTGAAG | 1 cut(s) | 173 |
| EcoRII | CCWGG | 1 cut(s) | 204 |
| EcoT14I | CCWWGG | 1 cut(s) | 7 |
| ErhI | CCWWGG | 1 cut(s) | 7 |
| FaiI | YATR | 6 cut(s) | 66, 68, 125, 185, 293, 356 |
| FspBI | CTAG | 1 cut(s) | 105 |
| HaeIII | GGCC | 1 cut(s) | 180 |
| HapII | CCGG | 1 cut(s) | 222 |
| HgaI | GACGC | 1 cut(s) | 237 |
| HpaII | CCGG | 1 cut(s) | 222 |
| HphI | GGTGA | 1 cut(s) | 308 |
| Hpy188I | TCNGA | 1 cut(s) | 46 |
| Hpy188III | TCNNGA | 3 cut(s) | 244, 281, 349 |
| HpyCH4IV | ACGT | 2 cut(s) | 118, 239 |
| HpyCH4V | TGCA | 2 cut(s) | 269, 329 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 18, 186, 222 |
| HpySE526I | ACGT | 2 cut(s) | 118, 239 |
| Kzo9I | GATC | 3 cut(s) | 3, 263, 351 |
| LmnI | GCTCC | 1 cut(s) | 221 |
| LpnPI | CCDG | 5 cut(s) | 191, 218, 235, 235, 334 |
| MaeI | CTAG | 1 cut(s) | 105 |
| MaeII | ACGT | 2 cut(s) | 118, 239 |
| MaeIII | GTNAC | 1 cut(s) | 258 |
| MalI | GATC | 3 cut(s) | 5, 265, 353 |
| MbiI | CCGCTC | 1 cut(s) | 216 |
| MboI | GATC | 3 cut(s) | 3, 263, 351 |
| MboII | GAAGA | 4 cut(s) | 154, 166, 311, 314 |
| MluCI | AATT | 2 cut(s) | 61, 158 |
| MmeI | TCCRAC | 1 cut(s) | 69 |
| MnlI | CCTC | 2 cut(s) | 127, 187 |
| MseI | TTAA | 1 cut(s) | 87 |
| MspI | CCGG | 1 cut(s) | 222 |
| MspR9I | CCNGG | 1 cut(s) | 206 |
| MvaI | CCWGG | 1 cut(s) | 206 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 18, 186, 222 |
| NdeII | GATC | 3 cut(s) | 3, 263, 351 |
| Psp6I | CCWGG | 1 cut(s) | 204 |
| PspGI | CCWGG | 1 cut(s) | 204 |
| PstI | CTGCAG | 1 cut(s) | 271 |
| SaqAI | TTAA | 1 cut(s) | 87 |
| Sau3AI | GATC | 3 cut(s) | 3, 263, 351 |
| ScrFI | CCNGG | 1 cut(s) | 206 |
| SetI | ASST | 5 cut(s) | 60, 121, 242, 298, 318 |
| SfcI | CTRYAG | 1 cut(s) | 267 |
| SgrAI | CRCCGGYG | 1 cut(s) | 221 |
| Sse9I | AATT | 2 cut(s) | 61, 158 |
| SsiI | CCGC | 3 cut(s) | 202, 214, 225 |
| SspMI | CTAG | 1 cut(s) | 105 |
| StyD4I | CCNGG | 1 cut(s) | 204 |
| StyI | CCWWGG | 1 cut(s) | 7 |
| TaiI | ACGT | 2 cut(s) | 121, 242 |
| TaqI | TCGA | 1 cut(s) | 309 |
| TasI | AATT | 2 cut(s) | 61, 158 |
| Tru1I | TTAA | 1 cut(s) | 87 |
| Tru9I | TTAA | 1 cut(s) | 87 |
| TspGWI | ACGGA | 1 cut(s) | 300 |
| XapI | RAATTY | 1 cut(s) | 158 |
| XspI | CTAG | 1 cut(s) | 105 |