EF hand
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g15920 FvH4_2g34550 |
| prunus_persica | Prupe.1G437300_v2.0.a1 Prupe.7G134600_v2.0.a1 |
| pyrus_communis | pycom02g13750 pycom08g08390 pycom15g24590 |
| rosa_chinensis | RchiOBHm_Chr2g0105311 RchiOBHm_Chr5g0048521 RchiOBHm_Chr5g0048531 RchiOBHm_Chr6g0307621 RchiOBHm_Chr6g0307791 |
| rosa_laevigata | RLG00000017415 |
| rosa_multiflora | Rmu_sc0000031.1_g000032 Rmu_sc0001407.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00033280 Rroxscaffold_2G00138310 |
| rosa_rugosa | Rorug02G0127500 Rorug06G0361000 |
| rosa_samantha | Rh2AG178100 Rh2BG186500 Rh2CG182700 Rh2DG184100 Rh5AG319000 Rh5BG329200 Rh5BG329400 Rh5CG355100 Rh5DG340400 Rh5DG340600 Rh6AG470000 Rh6BG480500 Rh6CG486200 Rh6DG472600 |
| rosa_wichuraiana | Rw5G029830 Rw5G029970 Rw6G041040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 6 |
| AccBSI | CCGCTC | 1 cut(s) | 138 |
| AciI | CCGC | 2 cut(s) | 124, 136 |
| AcsI | RAATTY | 1 cut(s) | 80 |
| AcuI | CTGAAG | 1 cut(s) | 95 |
| AfaI | GTAC | 1 cut(s) | 279 |
| AflIII | ACRYGT | 1 cut(s) | 40 |
| AgsI | TTSAA | 2 cut(s) | 64, 166 |
| AjnI | CCWGG | 1 cut(s) | 126 |
| AluBI | AGCT | 1 cut(s) | 153 |
| AluI | AGCT | 1 cut(s) | 153 |
| ApoI | RAATTY | 1 cut(s) | 80 |
| AsuHPI | GGTGA | 1 cut(s) | 230 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 202, 235 |
| BccI | CCATC | 1 cut(s) | 26 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 4, 38, 137, 171 |
| BciT130I | CCWGG | 1 cut(s) | 128 |
| BfaI | CTAG | 1 cut(s) | 27 |
| BfmI | CTRYAG | 1 cut(s) | 189 |
| BfuAI | ACCTGC | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 1 cut(s) | 128 |
| BmrFI | CCNGG | 1 cut(s) | 128 |
| BsaBI | GATNNNNATC | 1 cut(s) | 198 |
| BsaJI | CCNNGG | 1 cut(s) | 54 |
| Bse1I | ACTGG | 1 cut(s) | 148 |
| Bse8I | GATNNNNATC | 1 cut(s) | 198 |
| BseBI | CCWGG | 1 cut(s) | 128 |
| BseDI | CCNNGG | 1 cut(s) | 54 |
| BseJI | GATNNNNATC | 1 cut(s) | 198 |
| BseNI | ACTGG | 1 cut(s) | 148 |
| BseRI | GAGGAG | 1 cut(s) | 71 |
| BspACI | CCGC | 2 cut(s) | 124, 136 |
| BspMAI | CTGCAG | 1 cut(s) | 193 |
| BspMI | ACCTGC | 1 cut(s) | 6 |
| BsrBI | CCGCTC | 1 cut(s) | 138 |
| BsrI | ACTGG | 1 cut(s) | 148 |
| BssECI | CCNNGG | 1 cut(s) | 54 |
| Bst2UI | CCWGG | 1 cut(s) | 128 |
| Bst4CI | ACNGT | 1 cut(s) | 104 |
| BstC8I | GCNNGC | 2 cut(s) | 173, 177 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 144 |
| BstNI | CCWGG | 1 cut(s) | 128 |
| BstSCI | CCNGG | 1 cut(s) | 126 |
| BstSFI | CTRYAG | 1 cut(s) | 189 |
| BtsIMutI | CAGTG | 1 cut(s) | 141 |
| BveI | ACCTGC | 1 cut(s) | 6 |
| Cac8I | GCNNGC | 2 cut(s) | 173, 177 |
| Csp6I | GTAC | 1 cut(s) | 278 |
| CviJI | RGCY | 3 cut(s) | 73, 131, 153 |
| CviKI_1 | RGCY | 3 cut(s) | 73, 131, 153 |
| CviQI | GTAC | 1 cut(s) | 278 |
| EciI | GGCGGA | 1 cut(s) | 113 |
| Eco57I | CTGAAG | 1 cut(s) | 95 |
| EcoRII | CCWGG | 1 cut(s) | 126 |
| FaiI | YATR | 3 cut(s) | 47, 107, 215 |
| FspBI | CTAG | 1 cut(s) | 27 |
| HindIII | AAGCTT | 1 cut(s) | 151 |
| HphI | GGTGA | 1 cut(s) | 230 |
| Hpy166II | GTNNAC | 1 cut(s) | 280 |
| Hpy188III | TCNNGA | 2 cut(s) | 166, 203 |
| Hpy8I | GTNNAC | 1 cut(s) | 280 |
| HpyCH4III | ACNGT | 1 cut(s) | 104 |
| HpyCH4IV | ACGT | 2 cut(s) | 40, 161 |
| HpyCH4V | TGCA | 2 cut(s) | 191, 251 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 144 |
| HpySE526I | ACGT | 2 cut(s) | 40, 161 |
| LmnI | GCTCC | 1 cut(s) | 143 |
| LpnPI | CCDG | 4 cut(s) | 113, 129, 140, 157 |
| MaeI | CTAG | 1 cut(s) | 27 |
| MaeII | ACGT | 2 cut(s) | 40, 161 |
| MaeIII | GTNAC | 1 cut(s) | 180 |
| MbiI | CCGCTC | 1 cut(s) | 138 |
| MboII | GAAGA | 4 cut(s) | 76, 88, 233, 236 |
| MluCI | AATT | 1 cut(s) | 80 |
| MnlI | CCTC | 2 cut(s) | 49, 109 |
| MseI | TTAA | 1 cut(s) | 9 |
| MslI | CAYNNNNRTG | 1 cut(s) | 264 |
| MspR9I | CCNGG | 1 cut(s) | 128 |
| MvaI | CCWGG | 1 cut(s) | 128 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 144 |
| Psp6I | CCWGG | 1 cut(s) | 126 |
| PspGI | CCWGG | 1 cut(s) | 126 |
| PstI | CTGCAG | 1 cut(s) | 193 |
| RsaI | GTAC | 1 cut(s) | 279 |
| RsaNI | GTAC | 1 cut(s) | 278 |
| RseI | CAYNNNNRTG | 1 cut(s) | 264 |
| SaqAI | TTAA | 1 cut(s) | 9 |
| ScrFI | CCNGG | 1 cut(s) | 128 |
| SetI | ASST | 6 cut(s) | 20, 43, 155, 164, 220, 240 |
| SfcI | CTRYAG | 1 cut(s) | 189 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 264 |
| Sse9I | AATT | 1 cut(s) | 80 |
| SsiI | CCGC | 2 cut(s) | 124, 136 |
| SspMI | CTAG | 1 cut(s) | 27 |
| StyD4I | CCNGG | 1 cut(s) | 126 |
| TaaI | ACNGT | 1 cut(s) | 104 |
| TaiI | ACGT | 2 cut(s) | 43, 164 |
| TaqI | TCGA | 1 cut(s) | 231 |
| TasI | AATT | 1 cut(s) | 80 |
| Tru1I | TTAA | 1 cut(s) | 9 |
| Tru9I | TTAA | 1 cut(s) | 9 |
| TscAI | CASTG | 1 cut(s) | 148 |
| TspRI | CASTG | 1 cut(s) | 148 |
| XapI | RAATTY | 1 cut(s) | 80 |
| XspI | CTAG | 1 cut(s) | 27 |