RchiOBHm_Chr7g0195241

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
13146532 .. 13147092
561 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17459

Sequence Viewer

Length: 210 bp
ATGACCATTGGACTTTCTAGATTTAATCTGGAAAGTTTTAGCTCATTTAGATTTCATTTGGTTAGTCTGCCGCCCCTCCTTCCTTGTTTAGCTCGGTTTCTCCTACCCAAAGTAGGAAAATGTGCTAAAGTTGACTTTTCATGCTTCCATAGTAGGCTTTATTTAGCCTCTAAATATATATTTCGAACTTGTCGACAATATATAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

69

Amino Acids

8.01

Weight (kDa)

9.96

Isoelectric Point (pI)

31.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 193
AciI CCGC 1 cut(s) 71
AfiI CCNNNNNNNGG 1 cut(s) 113
AluBI AGCT 3 cut(s) 42, 92, 206
AluI AGCT 3 cut(s) 42, 92, 206
AsuII TTCGAA 1 cut(s) 184
BfaI CTAG 1 cut(s) 18
BisI GCNGC 1 cut(s) 71
BlsI GCNGC 1 cut(s) 72
Bpu14I TTCGAA 1 cut(s) 184
Bsc4I CCNNNNNNNGG 1 cut(s) 113
BseLI CCNNNNNNNGG 1 cut(s) 113
BslI CCNNNNNNNGG 1 cut(s) 113
Bsp119I TTCGAA 1 cut(s) 184
BspACI CCGC 1 cut(s) 71
BspT104I TTCGAA 1 cut(s) 184
BstBI TTCGAA 1 cut(s) 184
CviAII CATG 1 cut(s) 141
CviJI RGCY 5 cut(s) 42, 92, 157, 167, 206
CviKI_1 RGCY 5 cut(s) 42, 92, 157, 167, 206
FaeI CATG 1 cut(s) 144
FaiI YATR 6 cut(s) 142, 150, 177, 179, 201, 203
FatI CATG 1 cut(s) 140
FblI GTMKAC 1 cut(s) 193
Fnu4HI GCNGC 1 cut(s) 71
Fsp4HI GCNGC 1 cut(s) 71
FspBI CTAG 1 cut(s) 18
GluI GCNGC 1 cut(s) 71
Hin1II CATG 1 cut(s) 144
HincII GTYRAC 2 cut(s) 133, 194
HindII GTYRAC 2 cut(s) 133, 194
Hpy166II GTNNAC 2 cut(s) 133, 194
Hpy188III TCNNGA 2 cut(s) 18, 29
Hpy8I GTNNAC 2 cut(s) 133, 194
HpyAV CCTTC 1 cut(s) 89
Hsp92II CATG 1 cut(s) 144
LpnPI CCDG 1 cut(s) 14
MaeI CTAG 1 cut(s) 18
MnlI CCTC 2 cut(s) 86, 178
MseI TTAA 1 cut(s) 24
NlaIII CATG 1 cut(s) 144
NspV TTCGAA 1 cut(s) 184
PcsI WCGNNNNNNNCGW 1 cut(s) 190
PkrI GCNGC 1 cut(s) 72
SalI GTCGAC 1 cut(s) 192
SaqAI TTAA 1 cut(s) 24
SatI GCNGC 1 cut(s) 71
SetI ASST 3 cut(s) 44, 94, 208
SfuI TTCGAA 1 cut(s) 184
SgeI CNNG 6 cut(s) 30, 41, 96, 105, 153, 201
SsiI CCGC 1 cut(s) 71
SspMI CTAG 1 cut(s) 18
TaqI TCGA 2 cut(s) 184, 193
TauI GCSGC 1 cut(s) 73
Tru1I TTAA 1 cut(s) 24
Tru9I TTAA 1 cut(s) 24
TspDTI ATGAA 2 cut(s) 44, 129
XbaI TCTAGA 1 cut(s) 17
XmiI GTMKAC 1 cut(s) 193
XspI CTAG 1 cut(s) 18
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.