RchiOBHm_Chr7g0233791

water dikinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
58312861 .. 58313696
836 bp
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UTR
Exon/CDS
Intron
PRQ20956

Sequence Viewer

Length: 333 bp
ATGTTGGTCTGGTTGAGATTCATGTCGTGCAGGCATCTCACATGGAACAAAAACTACAATGTGAAACCTCGTGAAATTAGTGAAGCTCAAGATAGGTTTGCCAGTCTACTACAGAGAGTATATTTAAACCAGCCAAAGGATCGGGACGTAGTGAGACTACTAATGGCACATGTTGGTCGCAGGGTTCAGGGAGATGTTGGACAGAAGATTCGTGATGAAATACTTGTAATTCAGAGAAACAATGACTGCAAGAATGGCATGATGGAGGAATGGCACCAAAAGTTGCACAATAATAGTAGCCCAGATGATGTGATAATTTGTGAGGTATGGTAG

Protein Analysis

110

Amino Acids

13.17

Weight (kDa)

8.93

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 273
AccI GTMKAC 1 cut(s) 106
AclWI GGATC 1 cut(s) 147
AfiI CCNNNNNNNGG 1 cut(s) 136
AflIII ACRYGT 1 cut(s) 169
AluBI AGCT 1 cut(s) 86
AluI AGCT 1 cut(s) 86
Alw26I GTCTC 1 cut(s) 148
AlwI GGATC 1 cut(s) 147
ArsI GACNNNNNNTTYG 2 cut(s) 192, 224
BanI GGYRCC 1 cut(s) 273
BauI CACGAG 1 cut(s) 69
BccI CCATC 1 cut(s) 256
BcoDI GTCTC 1 cut(s) 148
BfmI CTRYAG 1 cut(s) 110
BmiI GGNNCC 1 cut(s) 275
BmsI GCATC 1 cut(s) 43
BpuEI CTTGAG 1 cut(s) 72
Bsc4I CCNNNNNNNGG 1 cut(s) 136
Bse1I ACTGG 1 cut(s) 102
BseLI CCNNNNNNNGG 1 cut(s) 136
BseNI ACTGG 1 cut(s) 102
BsgI GTGCAG 1 cut(s) 49
BshNI GGYRCC 1 cut(s) 273
BslFI GGGAC 1 cut(s) 158
BslI CCNNNNNNNGG 1 cut(s) 136
BsmAI GTCTC 1 cut(s) 148
BsmFI GGGAC 1 cut(s) 158
Bsp143I GATC 1 cut(s) 139
BspLI GGNNCC 1 cut(s) 275
BspPI GGATC 1 cut(s) 147
BspT107I GGYRCC 1 cut(s) 273
BsrI ACTGG 1 cut(s) 102
BssMI GATC 1 cut(s) 139
BssSI CACGAG 1 cut(s) 69
Bst2BI CACGAG 1 cut(s) 69
BstC8I GCNNGC 1 cut(s) 32
BstKTI GATC 1 cut(s) 142
BstMAI GTCTC 1 cut(s) 148
BstMBI GATC 1 cut(s) 139
BstMWI GCNNNNNNNGC 1 cut(s) 255
BstNSI RCATGY 1 cut(s) 173
BstSFI CTRYAG 1 cut(s) 110
Cac8I GCNNGC 1 cut(s) 32
CviAII CATG 4 cut(s) 22, 42, 170, 259
CviJI RGCY 3 cut(s) 86, 133, 300
CviKI_1 RGCY 3 cut(s) 86, 133, 300
DpnI GATC 1 cut(s) 141
DpnII GATC 1 cut(s) 139
DraI TTTAAA 1 cut(s) 126
FaeI CATG 4 cut(s) 25, 45, 173, 262
FaiI YATR 6 cut(s) 23, 43, 121, 171, 260, 328
FaqI GGGAC 1 cut(s) 158
FatI CATG 4 cut(s) 21, 41, 169, 258
FblI GTMKAC 1 cut(s) 106
Hin1II CATG 4 cut(s) 25, 45, 173, 262
HinfI GANTC 2 cut(s) 18, 208
Hpy166II GTNNAC 1 cut(s) 107
Hpy188I TCNGA 1 cut(s) 234
Hpy188III TCNNGA 4 cut(s) 71, 89, 143, 212
Hpy8I GTNNAC 1 cut(s) 107
HpyCH4IV ACGT 1 cut(s) 147
HpyCH4V TGCA 3 cut(s) 30, 249, 286
HpyF10VI GCNNNNNNNGC 1 cut(s) 255
HpySE526I ACGT 1 cut(s) 147
Hsp92II CATG 4 cut(s) 25, 45, 173, 262
Kzo9I GATC 1 cut(s) 139
LpnPI CCDG 6 cut(s) 16, 115, 143, 166, 173, 315
LweI GCATC 1 cut(s) 43
MaeII ACGT 1 cut(s) 147
MalI GATC 1 cut(s) 141
MboI GATC 1 cut(s) 139
MboII GAAGA 1 cut(s) 217
MluCI AATT 3 cut(s) 75, 228, 315
MmeI TCCRAC 1 cut(s) 178
MnlI CCTC 3 cut(s) 78, 259, 316
MseI TTAA 1 cut(s) 125
MwoI GCNNNNNNNGC 1 cut(s) 255
NdeII GATC 1 cut(s) 139
NlaIII CATG 4 cut(s) 25, 45, 173, 262
NlaIV GGNNCC 1 cut(s) 275
NspI RCATGY 1 cut(s) 173
PciI ACATGT 1 cut(s) 169
PfeI GAWTC 2 cut(s) 18, 208
PscI ACATGT 1 cut(s) 169
PspN4I GGNNCC 1 cut(s) 275
PsrI GAACNNNNNNTAC 2 cut(s) 38, 70
SaqAI TTAA 1 cut(s) 125
Sau3AI GATC 1 cut(s) 139
SetI ASST 5 cut(s) 70, 88, 98, 150, 327
SfaNI GCATC 1 cut(s) 43
SfcI CTRYAG 1 cut(s) 110
SmlI CTYRAG 1 cut(s) 87
SmoI CTYRAG 1 cut(s) 87
Sse9I AATT 3 cut(s) 75, 228, 315
TaiI ACGT 1 cut(s) 150
TasI AATT 3 cut(s) 75, 228, 315
TfiI GAWTC 2 cut(s) 18, 208
Tru1I TTAA 1 cut(s) 125
Tru9I TTAA 1 cut(s) 125
TspDTI ATGAA 2 cut(s) 10, 231
XceI RCATGY 1 cut(s) 173
XmiI GTMKAC 1 cut(s) 106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.